RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 NTMQ9P121 344 aa12.75□□□□□ -0.37
TPM1-230ENST00000561266 CFL2Q9Y281 166 aa12.75□□□□□ -0.37
TPM1-230ENST00000561266 ICE1Q9Y2F5 2266 aa12.75□□□□□ -0.37
TPM1-230ENST00000561266 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.75□□□□□ -0.37
TPM1-230ENST00000561266 A0A1W2PRB8 838 aa12.74□□□□□ -0.37
TPM1-230ENST00000561266 ACOX3O15254 700 aa12.74□□□□□ -0.37
TPM1-230ENST00000561266 TRIM3O75382 744 aaPredicted RBP12.74□□□□□ -0.37
TPM1-230ENST00000561266 IGKV1D-16P01601 117 aa12.74□□□□□ -0.37
TPM1-230ENST00000561266 PRPS1L1P21108 318 aa12.74□□□□□ -0.37
TPM1-230ENST00000561266 MAGEA5P43359 124 aa12.74□□□□□ -0.37
TPM1-230ENST00000561266 ZFP36L2P47974 494 aaKnown RBP12.74□□□□□ -0.37
TPM1-230ENST00000561266 PRKAG1P54619 331 aa12.74□□□□□ -0.37
TPM1-230ENST00000561266 DCAF7P61962 342 aa12.74□□□□□ -0.37
TPM1-230ENST00000561266 PLCXD2Q0VAA5 305 aa12.74□□□□□ -0.37
TPM1-230ENST00000561266 UBAP2LQ14157 1087 aaKnown RBP12.74□□□□□ -0.37
TPM1-230ENST00000561266 PGS1Q32NB8 556 aa12.74□□□□□ -0.37
TPM1-230ENST00000561266 EXOSC6Q5RKV6 272 aaKnown RBP12.74□□□□□ -0.37
TPM1-230ENST00000561266 C1QL3Q5VWW1 255 aa12.74□□□□□ -0.37
TPM1-230ENST00000561266 CAMKMTQ7Z624 323 aa12.74□□□□□ -0.37
TPM1-230ENST00000561266 POGLUT1Q8NBL1 392 aa12.74□□□□□ -0.37
TPM1-230ENST00000561266 NUP43Q8NFH3 380 aa12.74□□□□□ -0.37
TPM1-230ENST00000561266 FBXO30Q8TB52 745 aa12.74□□□□□ -0.37
TPM1-230ENST00000561266 PIWIL2Q8TC59 973 aaKnown RBP12.74□□□□□ -0.37
TPM1-230ENST00000561266 CKAP2Q8WWK9 683 aa12.74□□□□□ -0.37
TPM1-230ENST00000561266 DIO2Q92813 273 aa12.74□□□□□ -0.37
TPM1-230ENST00000561266 EFHD2Q96C19 240 aaPredicted RBP12.74□□□□□ -0.37
TPM1-230ENST00000561266 FAM120BQ96EK7 910 aaKnown RBP12.74□□□□□ -0.37
TPM1-230ENST00000561266 ZBED6CLQ96FA7 236 aaPredicted RBP12.74□□□□□ -0.37
TPM1-230ENST00000561266 ADOQ96SZ5 270 aa12.74□□□□□ -0.37
TPM1-230ENST00000561266 YIPF4Q9BSR8 244 aa12.74□□□□□ -0.37
TPM1-230ENST00000561266 LMF2Q9BU23 707 aaKnown RBP12.74□□□□□ -0.37
TPM1-230ENST00000561266 ANGPTL4Q9BY76 406 aa12.74□□□□□ -0.37
TPM1-230ENST00000561266 RTN4RQ9BZR6 473 aa12.74□□□□□ -0.37
TPM1-230ENST00000561266 ZDHHC11Q9H8X9 412 aa12.74□□□□□ -0.37
TPM1-230ENST00000561266 GALNT9Q9HCQ5 603 aa12.74□□□□□ -0.37
TPM1-230ENST00000561266 PLSCR2Q9NRY7 297 aa12.74□□□□□ -0.37
TPM1-230ENST00000561266 AIG1Q9NVV5 245 aa12.74□□□□□ -0.37
TPM1-230ENST00000561266 TAS2R9Q9NYW1 312 aa12.74□□□□□ -0.37
TPM1-230ENST00000561266 ZNF835Q9Y2P0 537 aa12.74□□□□□ -0.37
TPM1-230ENST00000561266 GPR45Q9Y5Y3 372 aa12.74□□□□□ -0.37
TPM1-230ENST00000561266 UTP20O75691 2785 aaKnown RBP12.74□□□□□ -0.37
TPM1-230ENST00000561266 A0A1B0GTH9 108 aa12.73□□□□□ -0.37
TPM1-230ENST00000561266 TFECO14948 347 aaPredicted RBP12.73□□□□□ -0.37
TPM1-230ENST00000561266 REM1O75628 298 aa12.73□□□□□ -0.37
TPM1-230ENST00000561266 STSP08842 583 aa12.73□□□□□ -0.37
TPM1-230ENST00000561266 IFI6P09912 130 aa12.73□□□□□ -0.37
TPM1-230ENST00000561266 CD1EP15812 388 aa12.73□□□□□ -0.37
TPM1-230ENST00000561266 NAGAP17050 411 aa12.73□□□□□ -0.37
TPM1-230ENST00000561266 GPC1P35052 558 aa12.73□□□□□ -0.37
TPM1-230ENST00000561266 NRG3P56975 720 aa12.73□□□□□ -0.37
TPM1-230ENST00000561266 HBA1P69905 142 aa12.73□□□□□ -0.37
TPM1-230ENST00000561266 PLGLB1Q02325 96 aa12.73□□□□□ -0.37
TPM1-230ENST00000561266 MAD2L1Q13257 205 aaPredicted RBP12.73□□□□□ -0.37
TPM1-230ENST00000561266 MLC1Q15049 377 aa12.73□□□□□ -0.37
TPM1-230ENST00000561266 C3AR1Q16581 482 aa12.73□□□□□ -0.37
TPM1-230ENST00000561266 HYAL4Q2M3T9 481 aa12.73□□□□□ -0.37
TPM1-230ENST00000561266 SPANXN4Q5MJ08 99 aa12.73□□□□□ -0.37
TPM1-230ENST00000561266 NCCRP1Q6ZVX7 275 aaPredicted RBP12.73□□□□□ -0.37
TPM1-230ENST00000561266 ZAR1Q86SH2 424 aa12.73□□□□□ -0.37
TPM1-230ENST00000561266 GALNT10Q86SR1 603 aa12.73□□□□□ -0.37
TPM1-230ENST00000561266 FAM26EQ8N5C1 309 aa12.73□□□□□ -0.37
TPM1-230ENST00000561266 SLC16A11Q8NCK7 471 aa12.73□□□□□ -0.37
TPM1-230ENST00000561266 PSMA8Q8TAA3 256 aa12.73□□□□□ -0.37
TPM1-230ENST00000561266 RNF138Q8WVD3 245 aa12.73□□□□□ -0.37
TPM1-230ENST00000561266 OR5P2Q8WZ92 322 aa12.73□□□□□ -0.37
TPM1-230ENST00000561266 PIK3R3Q92569 461 aa12.73□□□□□ -0.37
TPM1-230ENST00000561266 SLC35A4Q96G79 324 aa12.73□□□□□ -0.37
TPM1-230ENST00000561266 C7orf26Q96N11 449 aa12.73□□□□□ -0.37
TPM1-230ENST00000561266 RILPQ96NA2 401 aa12.73□□□□□ -0.37
TPM1-230ENST00000561266 EBF4Q9BQW3 602 aa12.73□□□□□ -0.37
TPM1-230ENST00000561266 DUSP26Q9BV47 211 aa12.73□□□□□ -0.37
TPM1-230ENST00000561266 IL1RL2Q9HB29 575 aa12.73□□□□□ -0.37
TPM1-230ENST00000561266 INTS9Q9NV88 658 aaKnown RBP12.73□□□□□ -0.37
TPM1-230ENST00000561266 FBXO34Q9NWN3 711 aa12.73□□□□□ -0.37
TPM1-230ENST00000561266 CNIH4Q9P003 139 aa12.73□□□□□ -0.37
TPM1-230ENST00000561266 TNFRSF10DQ9UBN6 386 aa12.73□□□□□ -0.37
TPM1-230ENST00000561266 KCNE3Q9Y6H6 103 aa12.73□□□□□ -0.37
TPM1-230ENST00000561266 USH1CQ9Y6N9 552 aa12.73□□□□□ -0.37
TPM1-230ENST00000561266 PTPN13Q12923 2485 aa12.72□□□□□ -0.37
TPM1-230ENST00000561266 ANKRD33BA6NCL7 494 aa12.72□□□□□ -0.37
TPM1-230ENST00000561266 TRPC5OSA6NMA1 111 aa12.72□□□□□ -0.37
TPM1-230ENST00000561266 LRRTM2O43300 516 aa12.72□□□□□ -0.37
TPM1-230ENST00000561266 EMC8O43402 210 aa12.72□□□□□ -0.37
TPM1-230ENST00000561266 CDC40O60508 579 aaKnown RBP eCLIP12.72□□□□□ -0.37
TPM1-230ENST00000561266 ICOSLGO75144 302 aa12.72□□□□□ -0.37
TPM1-230ENST00000561266 COQ9O75208 318 aa12.72□□□□□ -0.37
TPM1-230ENST00000561266 SLITRK5O94991 958 aa12.72□□□□□ -0.37
TPM1-230ENST00000561266 CYP4B1P13584 511 aa12.72□□□□□ -0.37
TPM1-230ENST00000561266 ENDOUP21128 410 aaKnown RBP12.72□□□□□ -0.37
TPM1-230ENST00000561266 GABRA3P34903 492 aa12.72□□□□□ -0.37
TPM1-230ENST00000561266 DGKQP52824 942 aa12.72□□□□□ -0.37
TPM1-230ENST00000561266 GAS1P54826 345 aa12.72□□□□□ -0.37
TPM1-230ENST00000561266 KCNJ2P63252 427 aa12.72□□□□□ -0.37
TPM1-230ENST00000561266 ELOAQ14241 798 aaKnown RBP12.72□□□□□ -0.37
TPM1-230ENST00000561266 DUSP5Q16690 384 aa12.72□□□□□ -0.37
TPM1-230ENST00000561266 LSM12Q3MHD2 195 aaKnown RBP12.72□□□□□ -0.37
TPM1-230ENST00000561266 KRTCAP3Q53RY4 240 aa12.72□□□□□ -0.37
TPM1-230ENST00000561266 MFSD12Q6NUT3 480 aa12.72□□□□□ -0.37
TPM1-230ENST00000561266 EPGNQ6UW88 154 aa12.72□□□□□ -0.37
TPM1-230ENST00000561266 GK5Q6ZS86 529 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms