RNA–Protein interactions for RNA: ENST00000560297.5

USP8-209, Transcript of ubiquitin specific peptidase 8, human

TSL 5

Gene USP8, Length 652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP8-209	ENST00000560297	GAB1	Q13480	694 aa		11.33	□□□□□ -0.6
USP8-209	ENST00000560297	TRMT5	Q32P41	509 aa	Known RBP	11.33	□□□□□ -0.6
USP8-209	ENST00000560297	REP15	Q6BDI9	236 aa		11.33	□□□□□ -0.6
USP8-209	ENST00000560297	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	11.33	□□□□□ -0.6
USP8-209	ENST00000560297	TRPM8	Q7Z2W7	1104 aa		11.33	□□□□□ -0.6
USP8-209	ENST00000560297	DHDDS	Q86SQ9	333 aa		11.33	□□□□□ -0.6
USP8-209	ENST00000560297	BEST3	Q8N1M1	668 aa		11.33	□□□□□ -0.6
USP8-209	ENST00000560297	CLEC4F	Q8N1N0	589 aa		11.33	□□□□□ -0.6
USP8-209	ENST00000560297	ZADH2	Q8N4Q0	377 aa		11.33	□□□□□ -0.6
USP8-209	ENST00000560297	HORMAD2	Q8N7B1	307 aa		11.33	□□□□□ -0.6
USP8-209	ENST00000560297	POU5F2	Q8N7G0	328 aa		11.33	□□□□□ -0.6
USP8-209	ENST00000560297	SLC16A11	Q8NCK7	471 aa		11.33	□□□□□ -0.6
USP8-209	ENST00000560297	C9orf43	Q8TAL5	461 aa	Predicted RBP	11.33	□□□□□ -0.6
USP8-209	ENST00000560297	GPR151	Q8TDV0	419 aa		11.33	□□□□□ -0.6
USP8-209	ENST00000560297	ASB15	Q8WXK1	588 aa		11.33	□□□□□ -0.6
USP8-209	ENST00000560297	JADE3	Q92613	823 aa		11.33	□□□□□ -0.6
USP8-209	ENST00000560297	ROPN1L	Q96C74	230 aa		11.33	□□□□□ -0.6
USP8-209	ENST00000560297	SLC35G5	Q96KT7	338 aa		11.33	□□□□□ -0.6
USP8-209	ENST00000560297	SGCZ	Q96LD1	299 aa		11.33	□□□□□ -0.6
USP8-209	ENST00000560297	CGREF1	Q99674	301 aa		11.33	□□□□□ -0.6
USP8-209	ENST00000560297	UTP23	Q9BRU9	249 aa	Known RBP	11.33	□□□□□ -0.6
USP8-209	ENST00000560297	THUMPD1	Q9NXG2	353 aa	Known RBP	11.33	□□□□□ -0.6
USP8-209	ENST00000560297	VAPA	Q9P0L0	249 aa		11.33	□□□□□ -0.6
USP8-209	ENST00000560297	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	11.33	□□□□□ -0.6
USP8-209	ENST00000560297	TAGLN3	Q9UI15	199 aa		11.33	□□□□□ -0.6
USP8-209	ENST00000560297	CBLC	Q9ULV8	474 aa		11.33	□□□□□ -0.6
USP8-209	ENST00000560297	MED13	Q9UHV7	2174 aa		11.33	□□□□□ -0.6
USP8-209	ENST00000560297	TRBV5-3	A0A0A0MS03	114 aa		11.32	□□□□□ -0.6
USP8-209	ENST00000560297	OR5H15	A6NDH6	313 aa		11.32	□□□□□ -0.6
USP8-209	ENST00000560297		A8MVJ9	347 aa		11.32	□□□□□ -0.6
USP8-209	ENST00000560297	AIM2	O14862	343 aa		11.32	□□□□□ -0.6
USP8-209	ENST00000560297	MAN1A2	O60476	641 aa		11.32	□□□□□ -0.6
USP8-209	ENST00000560297	DPM1	O60762	260 aa		11.32	□□□□□ -0.6
USP8-209	ENST00000560297	NME6	O75414	186 aa	Predicted RBP	11.32	□□□□□ -0.6
USP8-209	ENST00000560297	NADK	O95544	446 aa	Predicted RBP	11.32	□□□□□ -0.6
USP8-209	ENST00000560297	WDPCP	O95876	746 aa		11.32	□□□□□ -0.6
USP8-209	ENST00000560297	AK1	P00568	194 aa		11.32	□□□□□ -0.6
USP8-209	ENST00000560297	FBXO45	P0C2W1	286 aa		11.32	□□□□□ -0.6
USP8-209	ENST00000560297	FAM87A	P0C7U9	286 aa		11.32	□□□□□ -0.6
USP8-209	ENST00000560297	HOXB9	P17482	250 aa	Predicted RBP	11.32	□□□□□ -0.6
USP8-209	ENST00000560297	ABCD3	P28288	659 aa		11.32	□□□□□ -0.6
USP8-209	ENST00000560297	PIGA	P37287	484 aa		11.32	□□□□□ -0.6
USP8-209	ENST00000560297	CD96	P40200	585 aa		11.32	□□□□□ -0.6
USP8-209	ENST00000560297	SOX3	P41225	446 aa		11.32	□□□□□ -0.6
USP8-209	ENST00000560297	KHK	P50053	298 aa		11.32	□□□□□ -0.6
USP8-209	ENST00000560297	ARG2	P78540	354 aa		11.32	□□□□□ -0.6
USP8-209	ENST00000560297	MRPS22	P82650	360 aa	Known RBP	11.32	□□□□□ -0.6
USP8-209	ENST00000560297	OC90	Q02509	493 aa	Predicted RBP	11.32	□□□□□ -0.6
USP8-209	ENST00000560297	FADD	Q13158	208 aa		11.32	□□□□□ -0.6
USP8-209	ENST00000560297	ART3	Q13508	389 aa		11.32	□□□□□ -0.6
USP8-209	ENST00000560297	RGN	Q15493	299 aa		11.32	□□□□□ -0.6
USP8-209	ENST00000560297	DUSP5	Q16690	384 aa		11.32	□□□□□ -0.6
USP8-209	ENST00000560297	DECR1	Q16698	335 aa		11.32	□□□□□ -0.6
USP8-209	ENST00000560297	ZNF791	Q3KP31	576 aa	Predicted RBP	11.32	□□□□□ -0.6
USP8-209	ENST00000560297	GTDC1	Q4AE62	458 aa		11.32	□□□□□ -0.6
USP8-209	ENST00000560297	RUNDC3A	Q59EK9	446 aa		11.32	□□□□□ -0.6
USP8-209	ENST00000560297	ATAD3B	Q5T9A4	648 aa		11.32	□□□□□ -0.6
USP8-209	ENST00000560297	ANGPTL8	Q6UXH0	198 aa		11.32	□□□□□ -0.6
USP8-209	ENST00000560297	NPSR1	Q6W5P4	371 aa		11.32	□□□□□ -0.6
USP8-209	ENST00000560297	C16orf47	Q6ZP98	133 aa	Predicted RBP	11.32	□□□□□ -0.6
USP8-209	ENST00000560297	RNF130	Q86XS8	419 aa		11.32	□□□□□ -0.6
USP8-209	ENST00000560297	SLC34A3	Q8N130	599 aa		11.32	□□□□□ -0.6
USP8-209	ENST00000560297	OR52N2	Q8NGI0	321 aa		11.32	□□□□□ -0.6
USP8-209	ENST00000560297	XAGE5	Q8WWM1	108 aa		11.32	□□□□□ -0.6
USP8-209	ENST00000560297	LRRC58	Q96CX6	371 aa		11.32	□□□□□ -0.6
USP8-209	ENST00000560297	RCN3	Q96D15	328 aa		11.32	□□□□□ -0.6
USP8-209	ENST00000560297	SLC35A4	Q96G79	324 aa		11.32	□□□□□ -0.6
USP8-209	ENST00000560297	NSL1	Q96IY1	281 aa		11.32	□□□□□ -0.6
USP8-209	ENST00000560297	ANKRD27	Q96NW4	1050 aa		11.32	□□□□□ -0.6
USP8-209	ENST00000560297	OR7D2	Q96RA2	312 aa		11.32	□□□□□ -0.6
USP8-209	ENST00000560297	HOPX	Q9BPY8	73 aa	Predicted RBP	11.32	□□□□□ -0.6
USP8-209	ENST00000560297	YIPF4	Q9BSR8	244 aa		11.32	□□□□□ -0.6
USP8-209	ENST00000560297	BTBD2	Q9BX70	525 aa		11.32	□□□□□ -0.6
USP8-209	ENST00000560297	OR51I1	Q9H343	314 aa		11.32	□□□□□ -0.6
USP8-209	ENST00000560297	OCEL1	Q9H607	264 aa		11.32	□□□□□ -0.6
USP8-209	ENST00000560297	IL1RL2	Q9HB29	575 aa		11.32	□□□□□ -0.6
USP8-209	ENST00000560297	EXD2	Q9NVH0	621 aa		11.32	□□□□□ -0.6
USP8-209	ENST00000560297	HPF1	Q9NWY4	346 aa		11.32	□□□□□ -0.6
USP8-209	ENST00000560297	SLC25A37	Q9NYZ2	338 aa		11.32	□□□□□ -0.6
USP8-209	ENST00000560297	CFAP47	Q6ZTR5	3102 aa		11.32	□□□□□ -0.6
USP8-209	ENST00000560297	MAP1B	P46821	2468 aa	Known RBP	11.31	□□□□□ -0.6
USP8-209	ENST00000560297	TP53I11	O14683	189 aa		11.31	□□□□□ -0.6
USP8-209	ENST00000560297	REM1	O75628	298 aa		11.31	□□□□□ -0.6
USP8-209	ENST00000560297	PPM1B	O75688	479 aa		11.31	□□□□□ -0.6
USP8-209	ENST00000560297	OR6B1	O95007	311 aa		11.31	□□□□□ -0.6
USP8-209	ENST00000560297	UNC5C	O95185	931 aa		11.31	□□□□□ -0.6
USP8-209	ENST00000560297	ACP2	P11117	423 aa		11.31	□□□□□ -0.6
USP8-209	ENST00000560297	ESRRA	P11474	423 aa	Predicted RBP	11.31	□□□□□ -0.6
USP8-209	ENST00000560297	GPX2	P18283	190 aa		11.31	□□□□□ -0.6
USP8-209	ENST00000560297	LCN1	P31025	176 aa		11.31	□□□□□ -0.6
USP8-209	ENST00000560297	CRAT	P43155	626 aa		11.31	□□□□□ -0.6
USP8-209	ENST00000560297	PNLIPRP2	P54317	469 aa		11.31	□□□□□ -0.6
USP8-209	ENST00000560297	RPP38	P78345	283 aa	Known RBP	11.31	□□□□□ -0.6
USP8-209	ENST00000560297	POU6F2	P78424	691 aa	Predicted RBP	11.31	□□□□□ -0.6
USP8-209	ENST00000560297	PLCXD2	Q0VAA5	305 aa		11.31	□□□□□ -0.6
USP8-209	ENST00000560297	TUBA3C	Q13748	450 aa		11.31	□□□□□ -0.6
USP8-209	ENST00000560297	EFR3A	Q14156	821 aa		11.31	□□□□□ -0.6
USP8-209	ENST00000560297	NNAT	Q16517	81 aa		11.31	□□□□□ -0.6
USP8-209	ENST00000560297	LACTB2	Q53H82	288 aa	Predicted RBP	11.31	□□□□□ -0.6
USP8-209	ENST00000560297	NANOGP8	Q6NSW7	305 aa		11.31	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 33 ms