RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 DPYSL2Q16555 572 aa3.09□□□□□ -1.91
SPG11-218ENST00000559754 CLPPQ16740 277 aaPredicted RBP3.09□□□□□ -1.91
SPG11-218ENST00000559754 ARMC12Q5T9G4 340 aa3.09□□□□□ -1.91
SPG11-218ENST00000559754 ANXA8L1Q5VT79 327 aa3.09□□□□□ -1.91
SPG11-218ENST00000559754 TAF3Q5VWG9 929 aa3.09□□□□□ -1.91
SPG11-218ENST00000559754 C16orf87Q6PH81 154 aa3.09□□□□□ -1.91
SPG11-218ENST00000559754 SYT10Q6XYQ8 523 aa3.09□□□□□ -1.91
SPG11-218ENST00000559754 TMEM64Q6YI46 380 aa3.09□□□□□ -1.91
SPG11-218ENST00000559754 C17orf107Q6ZR85 190 aa3.09□□□□□ -1.91
SPG11-218ENST00000559754 ZC3H3Q8IXZ2 948 aaKnown RBP3.09□□□□□ -1.91
SPG11-218ENST00000559754 CCDC36Q8IYA8 594 aa3.09□□□□□ -1.91
SPG11-218ENST00000559754 UBQLNLQ8IYU4 475 aa3.09□□□□□ -1.91
SPG11-218ENST00000559754 ELMOD1Q8N336 334 aa3.09□□□□□ -1.91
SPG11-218ENST00000559754 ANKFN1Q8N957 763 aa3.09□□□□□ -1.91
SPG11-218ENST00000559754 MLKLQ8NB16 471 aa3.09□□□□□ -1.91
SPG11-218ENST00000559754 FAM184AQ8NB25 1140 aa3.09□□□□□ -1.91
SPG11-218ENST00000559754 BBOF1Q8ND07 529 aa3.09□□□□□ -1.91
SPG11-218ENST00000559754 PRSS33Q8NF86 280 aa3.09□□□□□ -1.91
SPG11-218ENST00000559754 OR7A2PQ8NGA2 310 aa3.09□□□□□ -1.91
SPG11-218ENST00000559754 OR13C5Q8NGS8 318 aa3.09□□□□□ -1.91
SPG11-218ENST00000559754 WDR36Q8NI36 951 aaKnown RBP3.09□□□□□ -1.91
SPG11-218ENST00000559754 ZNF519Q8TB69 540 aa3.09□□□□□ -1.91
SPG11-218ENST00000559754 SLC2A14Q8TDB8 520 aa3.09□□□□□ -1.91
SPG11-218ENST00000559754 ANKRD49Q8WVL7 239 aa3.09□□□□□ -1.91
SPG11-218ENST00000559754 SLC35C1Q96A29 364 aa3.09□□□□□ -1.91
SPG11-218ENST00000559754 SLC25A36Q96CQ1 311 aa3.09□□□□□ -1.91
SPG11-218ENST00000559754 NXPE2Q96DL1 559 aa3.09□□□□□ -1.91
SPG11-218ENST00000559754 HPDLQ96IR7 371 aa3.09□□□□□ -1.91
SPG11-218ENST00000559754 OMDQ99983 421 aa3.09□□□□□ -1.91
SPG11-218ENST00000559754 MTG1Q9BT17 334 aaPredicted RBP3.09□□□□□ -1.91
SPG11-218ENST00000559754 TMEM43Q9BTV4 400 aa3.09□□□□□ -1.91
SPG11-218ENST00000559754 ERVK-6Q9BXR3 956 aa3.09□□□□□ -1.91
SPG11-218ENST00000559754 LRRCC1Q9C099 1032 aa3.09□□□□□ -1.91
SPG11-218ENST00000559754 EXO5Q9H790 373 aa3.09□□□□□ -1.91
SPG11-218ENST00000559754 FANCEQ9HB96 536 aa3.09□□□□□ -1.91
SPG11-218ENST00000559754 LPAR2Q9HBW0 351 aa3.09□□□□□ -1.91
SPG11-218ENST00000559754 SPHK2Q9NRA0 654 aa3.09□□□□□ -1.91
SPG11-218ENST00000559754 TECRQ9NZ01 308 aaKnown RBP3.09□□□□□ -1.91
SPG11-218ENST00000559754 THEGQ9P2T0 379 aa3.09□□□□□ -1.91
SPG11-218ENST00000559754 R4GN57 208 aa3.09□□□□□ -1.91
SPG11-218ENST00000559754 PLEKHG2Q9H7P9 1386 aa3.09□□□□□ -1.92
SPG11-218ENST00000559754 A0A075B6Q4 140 aa3.08□□□□□ -1.92
SPG11-218ENST00000559754 TRAV26-1A0A087WT03 109 aa3.08□□□□□ -1.92
SPG11-218ENST00000559754 SERTM2A0A1B0GWG4 89 aa3.08□□□□□ -1.92
SPG11-218ENST00000559754 NCF1BA6NI72 391 aaPredicted RBP3.08□□□□□ -1.92
SPG11-218ENST00000559754 A8MVM7 634 aa3.08□□□□□ -1.92
SPG11-218ENST00000559754 NCF1CA8MVU1 366 aaPredicted RBP3.08□□□□□ -1.92
SPG11-218ENST00000559754 PES1O00541 588 aaKnown RBP3.08□□□□□ -1.92
SPG11-218ENST00000559754 SOCS3O14543 225 aa3.08□□□□□ -1.92
SPG11-218ENST00000559754 DNALI1O14645 258 aaPredicted RBP3.08□□□□□ -1.92
SPG11-218ENST00000559754 ARPC3O15145 178 aa3.08□□□□□ -1.92
SPG11-218ENST00000559754 P2RX6O15547 441 aa3.08□□□□□ -1.92
SPG11-218ENST00000559754 MLNRO43193 412 aa3.08□□□□□ -1.92
SPG11-218ENST00000559754 ZNF264O43296 627 aa3.08□□□□□ -1.92
SPG11-218ENST00000559754 LRRTM2O43300 516 aa3.08□□□□□ -1.92
SPG11-218ENST00000559754 IDH3BO43837 385 aa3.08□□□□□ -1.92
SPG11-218ENST00000559754 NEMFO60524 1076 aa3.08□□□□□ -1.92
SPG11-218ENST00000559754 FCMRO60667 390 aa3.08□□□□□ -1.92
SPG11-218ENST00000559754 CTAG2O75638 210 aa3.08□□□□□ -1.92
SPG11-218ENST00000559754 BBOX1O75936 387 aa3.08□□□□□ -1.92
SPG11-218ENST00000559754 CDK2AP2O75956 126 aa3.08□□□□□ -1.92
SPG11-218ENST00000559754 SLITRK3O94933 977 aa3.08□□□□□ -1.92
SPG11-218ENST00000559754 HPRP00739 348 aa3.08□□□□□ -1.92
SPG11-218ENST00000559754 IGHEP01854 428 aa3.08□□□□□ -1.92
SPG11-218ENST00000559754 VTNP04004 478 aa3.08□□□□□ -1.92
SPG11-218ENST00000559754 ATP1B1P05026 303 aa3.08□□□□□ -1.92
SPG11-218ENST00000559754 DBTP11182 482 aaKnown RBP3.08□□□□□ -1.92
SPG11-218ENST00000559754 EZRP15311 586 aaKnown RBP3.08□□□□□ -1.92
SPG11-218ENST00000559754 GPX3P22352 226 aa3.08□□□□□ -1.92
SPG11-218ENST00000559754 OPRL1P41146 370 aa3.08□□□□□ -1.92
SPG11-218ENST00000559754 MATKP42679 507 aa3.08□□□□□ -1.92
SPG11-218ENST00000559754 TMEM50BP56557 158 aa3.08□□□□□ -1.92
SPG11-218ENST00000559754 NAAAQ02083 359 aa3.08□□□□□ -1.92
SPG11-218ENST00000559754 SRSF5Q13243 272 aaKnown RBP3.08□□□□□ -1.92
SPG11-218ENST00000559754 EXOSC2Q13868 293 aaKnown RBP3.08□□□□□ -1.92
SPG11-218ENST00000559754 MTHFSDQ2M296 383 aaKnown RBP3.08□□□□□ -1.92
SPG11-218ENST00000559754 HKDC1Q2TB90 917 aa3.08□□□□□ -1.92
SPG11-218ENST00000559754 FGD3Q5JSP0 725 aa3.08□□□□□ -1.92
SPG11-218ENST00000559754 C1orf185Q5T7R7 199 aa3.08□□□□□ -1.92
SPG11-218ENST00000559754 LCN1P1Q5VSP4 162 aa3.08□□□□□ -1.92
SPG11-218ENST00000559754 C1orf189Q5VU69 101 aa3.08□□□□□ -1.92
SPG11-218ENST00000559754 TMEM225Q6GV28 225 aa3.08□□□□□ -1.92
SPG11-218ENST00000559754 PYHIN1Q6K0P9 492 aa3.08□□□□□ -1.92
SPG11-218ENST00000559754 ZNF774Q6NX45 483 aa3.08□□□□□ -1.92
SPG11-218ENST00000559754 DPY19L2P2Q6ZN68 376 aa3.08□□□□□ -1.92
SPG11-218ENST00000559754 Q6ZPB1 254 aaPredicted RBP3.08□□□□□ -1.92
SPG11-218ENST00000559754 Q6ZRP5 223 aa3.08□□□□□ -1.92
SPG11-218ENST00000559754 RFPL4BQ6ZWI9 263 aa3.08□□□□□ -1.92
SPG11-218ENST00000559754 C16orf62Q7Z3J2 963 aa3.08□□□□□ -1.92
SPG11-218ENST00000559754 TRMT11Q7Z4G4 463 aaKnown RBP3.08□□□□□ -1.92
SPG11-218ENST00000559754 C5orf24Q7Z6I8 188 aa3.08□□□□□ -1.92
SPG11-218ENST00000559754 FAM228AQ86W67 206 aa3.08□□□□□ -1.92
SPG11-218ENST00000559754 CDR2LQ86X02 465 aaPredicted RBP3.08□□□□□ -1.92
SPG11-218ENST00000559754 PSTKQ8IV42 348 aaKnown RBP3.08□□□□□ -1.92
SPG11-218ENST00000559754 PHC2Q8IXK0 858 aa3.08□□□□□ -1.92
SPG11-218ENST00000559754 GPC2Q8N158 579 aa3.08□□□□□ -1.92
SPG11-218ENST00000559754 UBE2J2Q8N2K1 259 aa3.08□□□□□ -1.92
SPG11-218ENST00000559754 FAM89BQ8N5H3 189 aa3.08□□□□□ -1.92
SPG11-218ENST00000559754 CCDC185Q8N715 623 aa3.08□□□□□ -1.92
SPG11-218ENST00000559754 CCDC197Q8NCU1 140 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms