RNA–Protein interactions for RNA: ENST00000558954.5

RABGGTA-208, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-208ENST00000558954 CPSF7Q8N684 471 aaKnown RBP17.37■□□□□ 0.37
RABGGTA-208ENST00000558954 CDRT4Q8N9R6 151 aa17.37■□□□□ 0.37
RABGGTA-208ENST00000558954 GALNT11Q8NCW6 608 aa17.37■□□□□ 0.37
RABGGTA-208ENST00000558954 OR56A1Q8NGH5 318 aa17.37■□□□□ 0.37
RABGGTA-208ENST00000558954 TEX37Q96LM6 180 aa17.37■□□□□ 0.37
RABGGTA-208ENST00000558954 SECISBP2Q96T21 854 aaKnown RBP17.37■□□□□ 0.37
RABGGTA-208ENST00000558954 SLX1AQ9BQ83 275 aa17.37■□□□□ 0.37
RABGGTA-208ENST00000558954 FAM173AQ9BQD7 235 aa17.37■□□□□ 0.37
RABGGTA-208ENST00000558954 CXorf36Q9H7Y0 433 aa17.37■□□□□ 0.37
RABGGTA-208ENST00000558954 DEPPQ9NTK1 212 aa17.37■□□□□ 0.37
RABGGTA-208ENST00000558954 FGFR1OP2Q9NVK5 253 aa17.37■□□□□ 0.37
RABGGTA-208ENST00000558954 MYO18BQ8IUG5 2567 aa17.37■□□□□ 0.37
RABGGTA-208ENST00000558954 HELZ2Q9BYK8 2649 aaKnown RBP17.37■□□□□ 0.37
RABGGTA-208ENST00000558954 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.36■□□□□ 0.37
RABGGTA-208ENST00000558954 PRSS51A0A1B0GVH4 220 aa17.36■□□□□ 0.37
RABGGTA-208ENST00000558954 C9JVG2 144 aa17.36■□□□□ 0.37
RABGGTA-208ENST00000558954 PGRP06401 933 aa17.36■□□□□ 0.37
RABGGTA-208ENST00000558954 TROVE2P10155 538 aaKnown RBP eCLIP17.36■□□□□ 0.37
RABGGTA-208ENST00000558954 IL12BP29460 328 aa17.36■□□□□ 0.37
RABGGTA-208ENST00000558954 CCT3P49368 545 aaKnown RBP17.36■□□□□ 0.37
RABGGTA-208ENST00000558954 IRX1P78414 480 aaPredicted RBP17.36■□□□□ 0.37
RABGGTA-208ENST00000558954 LRRC74AQ0VAA2 488 aa17.36■□□□□ 0.37
RABGGTA-208ENST00000558954 TP53BP2Q13625 1128 aa17.36■□□□□ 0.37
RABGGTA-208ENST00000558954 TBCELQ5QJ74 424 aa17.36■□□□□ 0.37
RABGGTA-208ENST00000558954 PRAMEF20Q5VT98 475 aa17.36■□□□□ 0.37
RABGGTA-208ENST00000558954 ZNF324BQ6AW86 544 aaPredicted RBP17.36■□□□□ 0.37
RABGGTA-208ENST00000558954 MFSD12Q6NUT3 480 aa17.36■□□□□ 0.37
RABGGTA-208ENST00000558954 ZCCHC12Q6PEW1 402 aa17.36■□□□□ 0.37
RABGGTA-208ENST00000558954 BHLHB9Q6PI77 547 aa17.36■□□□□ 0.37
RABGGTA-208ENST00000558954 ANKRD46Q86W74 232 aa17.36■□□□□ 0.37
RABGGTA-208ENST00000558954 ZFP62Q8NB50 900 aaPredicted RBP17.36■□□□□ 0.37
RABGGTA-208ENST00000558954 OR2M7Q8NG81 312 aa17.36■□□□□ 0.37
RABGGTA-208ENST00000558954 OR4A15Q8NGL6 344 aa17.36■□□□□ 0.37
RABGGTA-208ENST00000558954 DIO2Q92813 273 aa17.36■□□□□ 0.37
RABGGTA-208ENST00000558954 HOXB13Q92826 284 aaPredicted RBP17.36■□□□□ 0.37
RABGGTA-208ENST00000558954 TMBIM1Q969X1 311 aa17.36■□□□□ 0.37
RABGGTA-208ENST00000558954 GIMAP5Q96F15 307 aa17.36■□□□□ 0.37
RABGGTA-208ENST00000558954 THOC1Q96FV9 657 aaKnown RBP17.36■□□□□ 0.37
RABGGTA-208ENST00000558954 DCTN4Q9UJW0 460 aa17.36■□□□□ 0.37
RABGGTA-208ENST00000558954 VPS4AQ9UN37 437 aa17.36■□□□□ 0.37
RABGGTA-208ENST00000558954 HIVEP3Q5T1R4 2406 aa17.36■□□□□ 0.37
RABGGTA-208ENST00000558954 A0A0G2JMM0 328 aa17.35■□□□□ 0.37
RABGGTA-208ENST00000558954 A0A1W2PPB8 328 aa17.35■□□□□ 0.37
RABGGTA-208ENST00000558954 A0A1W2PRS3 328 aa17.35■□□□□ 0.37
RABGGTA-208ENST00000558954 OR6C70A6NIJ9 312 aa17.35■□□□□ 0.37
RABGGTA-208ENST00000558954 KIR3DP1A8MWS1 328 aa17.35■□□□□ 0.37
RABGGTA-208ENST00000558954 G3V3Y1 287 aa17.35■□□□□ 0.37
RABGGTA-208ENST00000558954 ACOT7O00154 380 aa17.35■□□□□ 0.37
RABGGTA-208ENST00000558954 REM1O75628 298 aa17.35■□□□□ 0.37
RABGGTA-208ENST00000558954 IL6P05231 212 aa17.35■□□□□ 0.37
RABGGTA-208ENST00000558954 VIMP08670 466 aaKnown RBP17.35■□□□□ 0.37
RABGGTA-208ENST00000558954 EDN3P14138 238 aa17.35■□□□□ 0.37
RABGGTA-208ENST00000558954 CNR1P21554 472 aa17.35■□□□□ 0.37
RABGGTA-208ENST00000558954 IL12AP29459 219 aa17.35■□□□□ 0.37
RABGGTA-208ENST00000558954 MRPL19P49406 292 aaKnown RBP17.35■□□□□ 0.37
RABGGTA-208ENST00000558954 PRIM2P49643 509 aa17.35■□□□□ 0.37
RABGGTA-208ENST00000558954 KCNJ2P63252 427 aa17.35■□□□□ 0.37
RABGGTA-208ENST00000558954 MRPS22P82650 360 aaKnown RBP17.35■□□□□ 0.37
RABGGTA-208ENST00000558954 ALDH6A1Q02252 535 aaKnown RBP17.35■□□□□ 0.37
RABGGTA-208ENST00000558954 IGFBP7Q16270 282 aa17.35■□□□□ 0.37
RABGGTA-208ENST00000558954 CYP27C1Q4G0S4 372 aa17.35■□□□□ 0.37
RABGGTA-208ENST00000558954 NUP54Q7Z3B4 507 aa17.35■□□□□ 0.37
RABGGTA-208ENST00000558954 WDR53Q7Z5U6 358 aaPredicted RBP17.35■□□□□ 0.37
RABGGTA-208ENST00000558954 SPPL2AQ8TCT8 520 aa17.35■□□□□ 0.37
RABGGTA-208ENST00000558954 JADE3Q92613 823 aa17.35■□□□□ 0.37
RABGGTA-208ENST00000558954 SLC35A4Q96G79 324 aa17.35■□□□□ 0.37
RABGGTA-208ENST00000558954 COL21A1Q96P44 957 aa17.35■□□□□ 0.37
RABGGTA-208ENST00000558954 OR52E6Q96RD3 313 aa17.35■□□□□ 0.37
RABGGTA-208ENST00000558954 MRTO4Q9UKD2 239 aaKnown RBP17.35■□□□□ 0.37
RABGGTA-208ENST00000558954 CBLCQ9ULV8 474 aa17.35■□□□□ 0.37
RABGGTA-208ENST00000558954 A0A0G2JND7 137 aa17.34■□□□□ 0.37
RABGGTA-208ENST00000558954 ANKRD33BA6NCL7 494 aa17.34■□□□□ 0.37
RABGGTA-208ENST00000558954 TFECO14948 347 aaPredicted RBP17.34■□□□□ 0.37
RABGGTA-208ENST00000558954 SCN2BO60939 215 aa17.34■□□□□ 0.37
RABGGTA-208ENST00000558954 HMGN2P05204 90 aaKnown RBP17.34■□□□□ 0.37
RABGGTA-208ENST00000558954 KRT16P08779 473 aa17.34■□□□□ 0.37
RABGGTA-208ENST00000558954 DNASE1L1P49184 302 aa17.34■□□□□ 0.37
RABGGTA-208ENST00000558954 DGKQP52824 942 aa17.34■□□□□ 0.37
RABGGTA-208ENST00000558954 PHC1P78364 1004 aa17.34■□□□□ 0.37
RABGGTA-208ENST00000558954 POLEQ07864 2286 aa17.34■□□□□ 0.37
RABGGTA-208ENST00000558954 EFR3AQ14156 821 aa17.34■□□□□ 0.37
RABGGTA-208ENST00000558954 LASP1Q14847 261 aaKnown RBP17.34■□□□□ 0.37
RABGGTA-208ENST00000558954 DECR1Q16698 335 aa17.34■□□□□ 0.37
RABGGTA-208ENST00000558954 ST6GALNAC3Q8NDV1 305 aa17.34■□□□□ 0.37
RABGGTA-208ENST00000558954 OR5AK3PQ8NH89 298 aa17.34■□□□□ 0.37
RABGGTA-208ENST00000558954 RFWD2Q8NHY2 731 aa17.34■□□□□ 0.37
RABGGTA-208ENST00000558954 GPR151Q8TDV0 419 aa17.34■□□□□ 0.37
RABGGTA-208ENST00000558954 SLC9A6Q92581 669 aa17.34■□□□□ 0.37
RABGGTA-208ENST00000558954 HGDQ93099 445 aa17.34■□□□□ 0.37
RABGGTA-208ENST00000558954 RILPQ96NA2 401 aa17.34■□□□□ 0.37
RABGGTA-208ENST00000558954 CCDC115Q96NT0 180 aa17.34■□□□□ 0.37
RABGGTA-208ENST00000558954 DOHHQ9BU89 302 aa17.34■□□□□ 0.37
RABGGTA-208ENST00000558954 BTNL2Q9UIR0 455 aa17.34■□□□□ 0.37
RABGGTA-208ENST00000558954 CNOT11Q9UKZ1 510 aaKnown RBP17.34■□□□□ 0.37
RABGGTA-208ENST00000558954 BOKQ9UMX3 212 aaPredicted RBP17.34■□□□□ 0.37
RABGGTA-208ENST00000558954 FAF1Q9UNN5 650 aaPredicted RBP17.34■□□□□ 0.37
RABGGTA-208ENST00000558954 TRIM33Q9UPN9 1127 aa17.34■□□□□ 0.37
RABGGTA-208ENST00000558954 RNF103-CHMP3A0A140T963 221 aa17.33■□□□□ 0.36
RABGGTA-208ENST00000558954 UGT2B11O75310 529 aa17.33■□□□□ 0.36
RABGGTA-208ENST00000558954 NKX2-2O95096 273 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms