RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 ANGPTL8Q6UXH0 198 aa11.01□□□□□ -0.65
TPM1-216ENST00000558910 GALNT10Q86SR1 603 aa11.01□□□□□ -0.65
TPM1-216ENST00000558910 CLYBLQ8N0X4 340 aa11.01□□□□□ -0.65
TPM1-216ENST00000558910 LIX1Q8N485 282 aa11.01□□□□□ -0.65
TPM1-216ENST00000558910 FAM109AQ8N4B1 249 aa11.01□□□□□ -0.65
TPM1-216ENST00000558910 OR10Q1Q8NGQ4 319 aa11.01□□□□□ -0.65
TPM1-216ENST00000558910 SPPL2AQ8TCT8 520 aa11.01□□□□□ -0.65
TPM1-216ENST00000558910 TP53INP1Q96A56 240 aa11.01□□□□□ -0.65
TPM1-216ENST00000558910 EFHD2Q96C19 240 aaPredicted RBP11.01□□□□□ -0.65
TPM1-216ENST00000558910 SDCCAG3Q96C92 435 aa11.01□□□□□ -0.65
TPM1-216ENST00000558910 OTUB1Q96FW1 271 aaPredicted RBP11.01□□□□□ -0.65
TPM1-216ENST00000558910 CHMP6Q96FZ7 201 aa11.01□□□□□ -0.65
TPM1-216ENST00000558910 ZNF597Q96LX8 424 aa11.01□□□□□ -0.65
TPM1-216ENST00000558910 C3orf30Q96M34 536 aa11.01□□□□□ -0.65
TPM1-216ENST00000558910 GNRHR2Q96P88 292 aa11.01□□□□□ -0.65
TPM1-216ENST00000558910 ADOQ96SZ5 270 aa11.01□□□□□ -0.65
TPM1-216ENST00000558910 GLIPR2Q9H4G4 154 aa11.01□□□□□ -0.65
TPM1-216ENST00000558910 FOLH1BQ9HBA9 442 aa11.01□□□□□ -0.65
TPM1-216ENST00000558910 ZFP64Q9NPA5 681 aa11.01□□□□□ -0.65
TPM1-216ENST00000558910 MYNNQ9NPC7 610 aa11.01□□□□□ -0.65
TPM1-216ENST00000558910 PRODH2Q9UF12 536 aa11.01□□□□□ -0.65
TPM1-216ENST00000558910 ZNF639Q9UID6 485 aa11.01□□□□□ -0.65
TPM1-216ENST00000558910 RAB21Q9UL25 225 aa11.01□□□□□ -0.65
TPM1-216ENST00000558910 EXO1Q9UQ84 846 aaKnown RBP11.01□□□□□ -0.65
TPM1-216ENST00000558910 CFL2Q9Y281 166 aa11.01□□□□□ -0.65
TPM1-216ENST00000558910 ZNF835Q9Y2P0 537 aa11.01□□□□□ -0.65
TPM1-216ENST00000558910 SLC6A5Q9Y345 797 aa11.01□□□□□ -0.65
TPM1-216ENST00000558910 CCL27Q9Y4X3 112 aa11.01□□□□□ -0.65
TPM1-216ENST00000558910 TEP1Q99973 2627 aaKnown RBP11.01□□□□□ -0.65
TPM1-216ENST00000558910 GTF3C1Q12789 2109 aa11□□□□□ -0.65
TPM1-216ENST00000558910 TRGV5A0A0B4J1U4 118 aa11□□□□□ -0.65
TPM1-216ENST00000558910 SERTM1A2A2V5 107 aa11□□□□□ -0.65
TPM1-216ENST00000558910 LRRC3CA6NJW4 275 aa11□□□□□ -0.65
TPM1-216ENST00000558910 FAM90A27PA6NNH2 459 aa11□□□□□ -0.65
TPM1-216ENST00000558910 C17orf51A8MQB3 221 aa11□□□□□ -0.65
TPM1-216ENST00000558910 H3BQF6 201 aa11□□□□□ -0.65
TPM1-216ENST00000558910 PDPK1O15530 556 aa11□□□□□ -0.65
TPM1-216ENST00000558910 UGT2B11O75310 529 aa11□□□□□ -0.65
TPM1-216ENST00000558910 ERN1O75460 977 aaKnown RBP11□□□□□ -0.65
TPM1-216ENST00000558910 PPM1BO75688 479 aa11□□□□□ -0.65
TPM1-216ENST00000558910 GLSO94925 669 aaPredicted RBP11□□□□□ -0.65
TPM1-216ENST00000558910 ABCB1P08183 1280 aaPredicted RBP11□□□□□ -0.65
TPM1-216ENST00000558910 SDC1P18827 310 aa11□□□□□ -0.65
TPM1-216ENST00000558910 HTR1EP28566 365 aa11□□□□□ -0.65
TPM1-216ENST00000558910 IL12BP29460 328 aa11□□□□□ -0.65
TPM1-216ENST00000558910 CASP3P42574 277 aa11□□□□□ -0.65
TPM1-216ENST00000558910 TMED10P49755 219 aaKnown RBP11□□□□□ -0.65
TPM1-216ENST00000558910 SMSP52788 366 aa11□□□□□ -0.65
TPM1-216ENST00000558910 PMPCAQ10713 525 aa11□□□□□ -0.65
TPM1-216ENST00000558910 STX5Q13190 355 aa11□□□□□ -0.65
TPM1-216ENST00000558910 GXYLT1Q4G148 440 aa11□□□□□ -0.65
TPM1-216ENST00000558910 NPSR1Q6W5P4 371 aa11□□□□□ -0.65
TPM1-216ENST00000558910 LARP4Q71RC2 724 aaKnown RBP eCLIP11□□□□□ -0.65
TPM1-216ENST00000558910 TRILQ7L0X0 811 aa11□□□□□ -0.65
TPM1-216ENST00000558910 YRDCQ86U90 279 aaKnown RBP11□□□□□ -0.65
TPM1-216ENST00000558910 CCDC71Q8IV32 467 aaPredicted RBP11□□□□□ -0.65
TPM1-216ENST00000558910 FNDC5Q8NAU1 212 aa11□□□□□ -0.65
TPM1-216ENST00000558910 PPCDCQ96CD2 204 aa11□□□□□ -0.65
TPM1-216ENST00000558910 TUBGCP3Q96CW5 907 aa11□□□□□ -0.65
TPM1-216ENST00000558910 C11orf24Q96F05 449 aaPredicted RBP11□□□□□ -0.65
TPM1-216ENST00000558910 YIPF4Q9BSR8 244 aa11□□□□□ -0.65
TPM1-216ENST00000558910 TRMOQ9BU70 441 aa11□□□□□ -0.65
TPM1-216ENST00000558910 TMEM109Q9BVC6 243 aa11□□□□□ -0.65
TPM1-216ENST00000558910 SH2D2AQ9NP31 389 aa11□□□□□ -0.65
TPM1-216ENST00000558910 DDX18Q9NVP1 670 aaKnown RBP11□□□□□ -0.65
TPM1-216ENST00000558910 CNIH4Q9P003 139 aa11□□□□□ -0.65
TPM1-216ENST00000558910 SPRR3Q9UBC9 169 aa11□□□□□ -0.65
TPM1-216ENST00000558910 NOTCH2Q04721 2471 aa11□□□□□ -0.65
TPM1-216ENST00000558910 DNAJC13O75165 2243 aa10.99□□□□□ -0.65
TPM1-216ENST00000558910 MYO1GB0I1T2 1018 aa10.99□□□□□ -0.65
TPM1-216ENST00000558910 LSM1O15116 133 aaKnown RBP10.99□□□□□ -0.65
TPM1-216ENST00000558910 SCO2O43819 266 aa10.99□□□□□ -0.65
TPM1-216ENST00000558910 MYZAPP0CAP1 466 aa10.99□□□□□ -0.65
TPM1-216ENST00000558910 BCKDHAP12694 445 aa10.99□□□□□ -0.65
TPM1-216ENST00000558910 CDK9P50750 372 aaKnown RBP10.99□□□□□ -0.65
TPM1-216ENST00000558910 WNT3P56703 355 aa10.99□□□□□ -0.65
TPM1-216ENST00000558910 RPP38P78345 283 aaKnown RBP10.99□□□□□ -0.65
TPM1-216ENST00000558910 MPP2Q14168 576 aa10.99□□□□□ -0.65
TPM1-216ENST00000558910 KIAA0040Q15053 153 aa10.99□□□□□ -0.65
TPM1-216ENST00000558910 UGT3A2Q3SY77 523 aa10.99□□□□□ -0.65
TPM1-216ENST00000558910 EIPR1Q53HC9 387 aa10.99□□□□□ -0.65
TPM1-216ENST00000558910 TBCELQ5QJ74 424 aa10.99□□□□□ -0.65
TPM1-216ENST00000558910 HHATQ5VTY9 493 aa10.99□□□□□ -0.65
TPM1-216ENST00000558910 Q6ZPB1 254 aaPredicted RBP10.99□□□□□ -0.65
TPM1-216ENST00000558910 SAMD14Q8IZD0 417 aaPredicted RBP10.99□□□□□ -0.65
TPM1-216ENST00000558910 SLC34A3Q8N130 599 aa10.99□□□□□ -0.65
TPM1-216ENST00000558910 MARVELD2Q8N4S9 558 aa10.99□□□□□ -0.65
TPM1-216ENST00000558910 ZNF781Q8N8C0 355 aa10.99□□□□□ -0.65
TPM1-216ENST00000558910 OR7A2PQ8NGA2 310 aa10.99□□□□□ -0.65
TPM1-216ENST00000558910 CTHRC1Q96CG8 243 aa10.99□□□□□ -0.65
TPM1-216ENST00000558910 AMDHD1Q96NU7 426 aa10.99□□□□□ -0.65
TPM1-216ENST00000558910 OSBPL11Q9BXB4 747 aa10.99□□□□□ -0.65
TPM1-216ENST00000558910 ZNF703Q9H7S9 590 aaPredicted RBP10.99□□□□□ -0.65
TPM1-216ENST00000558910 ZDHHC11Q9H8X9 412 aa10.99□□□□□ -0.65
TPM1-216ENST00000558910 SERHLQ9NQF3 203 aa10.99□□□□□ -0.65
TPM1-216ENST00000558910 B4GALT7Q9UBV7 327 aa10.99□□□□□ -0.65
TPM1-216ENST00000558910 CELSR2Q9HCU4 2923 aa10.99□□□□□ -0.65
TPM1-216ENST00000558910 PRAMEF25A6NGN4 478 aa10.98□□□□□ -0.65
TPM1-216ENST00000558910 FRG2CA6NGY1 282 aa10.98□□□□□ -0.65
TPM1-216ENST00000558910 C19orf84I3L1E1 186 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms