RNA–Protein interactions for RNA: ENST00000558752.1

RPL28-206, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-206ENST00000558752 ULK2Q8IYT8 1036 aa13.98□□□□□ -0.17
RPL28-206ENST00000558752 CCDC116Q8IYX3 515 aa13.98□□□□□ -0.17
RPL28-206ENST00000558752 FAM13CQ8NE31 585 aa13.98□□□□□ -0.17
RPL28-206ENST00000558752 NEIL3Q8TAT5 605 aa13.98□□□□□ -0.17
RPL28-206ENST00000558752 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.98□□□□□ -0.17
RPL28-206ENST00000558752 MBD6Q96DN6 1003 aa13.98□□□□□ -0.17
RPL28-206ENST00000558752 JSRP1Q96MG2 331 aaPredicted RBP13.98□□□□□ -0.17
RPL28-206ENST00000558752 BRINP2Q9C0B6 783 aa13.98□□□□□ -0.17
RPL28-206ENST00000558752 STMN4Q9H169 189 aaPredicted RBP13.98□□□□□ -0.17
RPL28-206ENST00000558752 ZNF703Q9H7S9 590 aaPredicted RBP13.98□□□□□ -0.17
RPL28-206ENST00000558752 SSU72Q9NP77 194 aaKnown RBP13.98□□□□□ -0.17
RPL28-206ENST00000558752 PFDN4Q9NQP4 134 aa13.98□□□□□ -0.17
RPL28-206ENST00000558752 C1orf109Q9NX04 203 aa13.98□□□□□ -0.17
RPL28-206ENST00000558752 HEY2Q9UBP5 337 aa13.98□□□□□ -0.17
RPL28-206ENST00000558752 BCAP29Q9UHQ4 241 aa13.98□□□□□ -0.17
RPL28-206ENST00000558752 PLEKHA6Q9Y2H5 1048 aa13.98□□□□□ -0.17
RPL28-206ENST00000558752 TMED5Q9Y3A6 229 aa13.98□□□□□ -0.17
RPL28-206ENST00000558752 TRAF6Q9Y4K3 522 aa13.98□□□□□ -0.17
RPL28-206ENST00000558752 CCL27Q9Y4X3 112 aa13.98□□□□□ -0.17
RPL28-206ENST00000558752 ANKHD1Q8IWZ3 2542 aaKnown RBP13.98□□□□□ -0.17
RPL28-206ENST00000558752 EML6Q6ZMW3 1958 aa13.97□□□□□ -0.17
RPL28-206ENST00000558752 A0A1W2PS29 197 aa13.97□□□□□ -0.17
RPL28-206ENST00000558752 TUBAL3A6NHL2 446 aa13.97□□□□□ -0.17
RPL28-206ENST00000558752 TYROBPO43914 113 aa13.97□□□□□ -0.17
RPL28-206ENST00000558752 SPAG7O75391 227 aa13.97□□□□□ -0.17
RPL28-206ENST00000558752 SEC22BO75396 215 aa13.97□□□□□ -0.17
RPL28-206ENST00000558752 SNUPNO95149 360 aaKnown RBP13.97□□□□□ -0.17
RPL28-206ENST00000558752 SNX4O95219 450 aa13.97□□□□□ -0.17
RPL28-206ENST00000558752 EPPINO95925 133 aa13.97□□□□□ -0.17
RPL28-206ENST00000558752 RAF1P04049 648 aa13.97□□□□□ -0.17
RPL28-206ENST00000558752 DDX5P17844 614 aaKnown RBP13.97□□□□□ -0.17
RPL28-206ENST00000558752 DRD5P21918 477 aa13.97□□□□□ -0.17
RPL28-206ENST00000558752 BMP5P22003 454 aa13.97□□□□□ -0.17
RPL28-206ENST00000558752 TIMP3P35625 211 aa13.97□□□□□ -0.17
RPL28-206ENST00000558752 PPICP45877 212 aa13.97□□□□□ -0.17
RPL28-206ENST00000558752 FOXD4Q12950 439 aaPredicted RBP13.97□□□□□ -0.17
RPL28-206ENST00000558752 KIAA0040Q15053 153 aa13.97□□□□□ -0.17
RPL28-206ENST00000558752 FBXL19-AS1Q494R0 122 aa13.97□□□□□ -0.17
RPL28-206ENST00000558752 ARL13AQ5H913 290 aaPredicted RBP13.97□□□□□ -0.17
RPL28-206ENST00000558752 FAM71E1Q6IPT2 247 aa13.97□□□□□ -0.17
RPL28-206ENST00000558752 DOK4Q8TEW6 326 aa13.97□□□□□ -0.17
RPL28-206ENST00000558752 LCORQ96JN0 433 aaPredicted RBP13.97□□□□□ -0.17
RPL28-206ENST00000558752 BBS4Q96RK4 519 aa13.97□□□□□ -0.17
RPL28-206ENST00000558752 DOHHQ9BU89 302 aa13.97□□□□□ -0.17
RPL28-206ENST00000558752 LRTM1Q9HBL6 345 aa13.97□□□□□ -0.17
RPL28-206ENST00000558752 MYNNQ9NPC7 610 aa13.97□□□□□ -0.17
RPL28-206ENST00000558752 SLC17A7Q9P2U7 560 aa13.97□□□□□ -0.17
RPL28-206ENST00000558752 SPRR3Q9UBC9 169 aa13.97□□□□□ -0.17
RPL28-206ENST00000558752 ACTL7BQ9Y614 415 aa13.97□□□□□ -0.17
RPL28-206ENST00000558752 ABCA2Q9BZC7 2435 aa13.97□□□□□ -0.17
RPL28-206ENST00000558752 AKAP6Q13023 2319 aa13.97□□□□□ -0.17
RPL28-206ENST00000558752 C15orf38-AP3S2A0A0A6YYH1 394 aa13.96□□□□□ -0.17
RPL28-206ENST00000558752 PLOD3O60568 738 aa13.96□□□□□ -0.17
RPL28-206ENST00000558752 BPGMP07738 259 aa13.96□□□□□ -0.17
RPL28-206ENST00000558752 IFI6P09912 130 aa13.96□□□□□ -0.17
RPL28-206ENST00000558752 GDF1P27539 372 aa13.96□□□□□ -0.17
RPL28-206ENST00000558752 ZNF844Q08AG5 666 aa13.96□□□□□ -0.17
RPL28-206ENST00000558752 KEAP1Q14145 624 aa13.96□□□□□ -0.17
RPL28-206ENST00000558752 RPS6KA2Q15349 733 aa13.96□□□□□ -0.17
RPL28-206ENST00000558752 PRAMEF20Q5VT98 475 aa13.96□□□□□ -0.17
RPL28-206ENST00000558752 FAM111BQ6SJ93 734 aa13.96□□□□□ -0.17
RPL28-206ENST00000558752 PAMR1Q6UXH9 720 aa13.96□□□□□ -0.17
RPL28-206ENST00000558752 NUP54Q7Z3B4 507 aa13.96□□□□□ -0.17
RPL28-206ENST00000558752 BIVMQ86UB2 503 aa13.96□□□□□ -0.17
RPL28-206ENST00000558752 EXOSC8Q96B26 276 aaKnown RBP13.96□□□□□ -0.17
RPL28-206ENST00000558752 ZNF764Q96H86 408 aaPredicted RBP13.96□□□□□ -0.17
RPL28-206ENST00000558752 ZNF597Q96LX8 424 aa13.96□□□□□ -0.17
RPL28-206ENST00000558752 TNFRSF12AQ9NP84 129 aa13.96□□□□□ -0.17
RPL28-206ENST00000558752 MIEF1Q9NQG6 463 aa13.96□□□□□ -0.17
RPL28-206ENST00000558752 CHCHD2Q9Y6H1 151 aaPredicted RBP13.96□□□□□ -0.17
RPL28-206ENST00000558752 ARHGAP21Q5T5U3 1957 aa13.95□□□□□ -0.18
RPL28-206ENST00000558752 A0A087WV62 115 aa13.95□□□□□ -0.18
RPL28-206ENST00000558752 MYO1GB0I1T2 1018 aa13.95□□□□□ -0.18
RPL28-206ENST00000558752 TO15178 435 aa13.95□□□□□ -0.18
RPL28-206ENST00000558752 TM9SF1O15321 606 aa13.95□□□□□ -0.18
RPL28-206ENST00000558752 BIRC5O15392 142 aa13.95□□□□□ -0.18
RPL28-206ENST00000558752 TRAPPC6AO75865 159 aa13.95□□□□□ -0.18
RPL28-206ENST00000558752 CBX7O95931 251 aa13.95□□□□□ -0.18
RPL28-206ENST00000558752 MYZAPP0CAP1 466 aa13.95□□□□□ -0.18
RPL28-206ENST00000558752 EPXP11678 715 aa13.95□□□□□ -0.18
RPL28-206ENST00000558752 ENDOUP21128 410 aaKnown RBP13.95□□□□□ -0.18
RPL28-206ENST00000558752 GPX3P22352 226 aa13.95□□□□□ -0.18
RPL28-206ENST00000558752 CEACAM8P31997 349 aaPredicted RBP13.95□□□□□ -0.18
RPL28-206ENST00000558752 OPRM1P35372 400 aa13.95□□□□□ -0.18
RPL28-206ENST00000558752 GCKP35557 465 aa13.95□□□□□ -0.18
RPL28-206ENST00000558752 ETV4P43268 484 aa13.95□□□□□ -0.18
RPL28-206ENST00000558752 EMDP50402 254 aa13.95□□□□□ -0.18
RPL28-206ENST00000558752 TRMT12Q53H54 448 aaKnown RBP13.95□□□□□ -0.18
RPL28-206ENST00000558752 ZNF628Q5EBL2 1059 aa13.95□□□□□ -0.18
RPL28-206ENST00000558752 KANK2Q63ZY3 851 aa13.95□□□□□ -0.18
RPL28-206ENST00000558752 CLEC6AQ6EIG7 209 aa13.95□□□□□ -0.18
RPL28-206ENST00000558752 TMEM81Q6P7N7 255 aa13.95□□□□□ -0.18
RPL28-206ENST00000558752 LRIG3Q6UXM1 1119 aa13.95□□□□□ -0.18
RPL28-206ENST00000558752 Q6ZSR9 355 aa13.95□□□□□ -0.18
RPL28-206ENST00000558752 PACS2Q86VP3 889 aa13.95□□□□□ -0.18
RPL28-206ENST00000558752 NUDCD3Q8IVD9 361 aa13.95□□□□□ -0.18
RPL28-206ENST00000558752 FAM9CQ8IZT9 166 aa13.95□□□□□ -0.18
RPL28-206ENST00000558752 KIRREL3Q8IZU9 778 aa13.95□□□□□ -0.18
RPL28-206ENST00000558752 ADCY4Q8NFM4 1077 aa13.95□□□□□ -0.18
RPL28-206ENST00000558752 OR10G3Q8NGC4 313 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms