RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 CDCP1Q9H5V8 836 aa11.14□□□□□ -0.63
HMGB1P8-201ENST00000558211 CXorf36Q9H7Y0 433 aa11.14□□□□□ -0.63
HMGB1P8-201ENST00000558211 C3orf14Q9HBI5 128 aa11.14□□□□□ -0.63
HMGB1P8-201ENST00000558211 EQTNQ9NQ60 294 aa11.14□□□□□ -0.63
HMGB1P8-201ENST00000558211 FAM120CQ9NX05 1096 aaKnown RBP11.14□□□□□ -0.63
HMGB1P8-201ENST00000558211 GPR83Q9NYM4 423 aa11.14□□□□□ -0.63
HMGB1P8-201ENST00000558211 ZNF639Q9UID6 485 aa11.14□□□□□ -0.63
HMGB1P8-201ENST00000558211 CAPN7Q9Y6W3 813 aa11.14□□□□□ -0.63
HMGB1P8-201ENST00000558211 TNRC6AQ8NDV7 1962 aaKnown RBP11.14□□□□□ -0.63
HMGB1P8-201ENST00000558211 LOC100653049A0A140TA62 436 aa11.13□□□□□ -0.63
HMGB1P8-201ENST00000558211 WWP2O00308 870 aa11.13□□□□□ -0.63
HMGB1P8-201ENST00000558211 UPK1AO00322 258 aa11.13□□□□□ -0.63
HMGB1P8-201ENST00000558211 EMC8O43402 210 aa11.13□□□□□ -0.63
HMGB1P8-201ENST00000558211 KRT34O76011 436 aa11.13□□□□□ -0.63
HMGB1P8-201ENST00000558211 ANP32DO95626 131 aa11.13□□□□□ -0.63
HMGB1P8-201ENST00000558211 CLPSP04118 112 aa11.13□□□□□ -0.63
HMGB1P8-201ENST00000558211 IGKV3-11P04433 115 aa11.13□□□□□ -0.63
HMGB1P8-201ENST00000558211 SNRPB2P08579 225 aaKnown RBP11.13□□□□□ -0.63
HMGB1P8-201ENST00000558211 CAPN3P20807 821 aa11.13□□□□□ -0.63
HMGB1P8-201ENST00000558211 ADMP35318 185 aa11.13□□□□□ -0.63
HMGB1P8-201ENST00000558211 CDKN2CP42773 168 aa11.13□□□□□ -0.63
HMGB1P8-201ENST00000558211 CCT3P49368 545 aaKnown RBP11.13□□□□□ -0.63
HMGB1P8-201ENST00000558211 SLC37A1P57057 533 aa11.13□□□□□ -0.63
HMGB1P8-201ENST00000558211 AP2B1P63010 937 aa11.13□□□□□ -0.63
HMGB1P8-201ENST00000558211 RNF4P78317 190 aa11.13□□□□□ -0.63
HMGB1P8-201ENST00000558211 DUSP8Q13202 625 aa11.13□□□□□ -0.63
HMGB1P8-201ENST00000558211 MLC1Q15049 377 aa11.13□□□□□ -0.63
HMGB1P8-201ENST00000558211 C6orf10Q5SRN2 563 aa11.13□□□□□ -0.63
HMGB1P8-201ENST00000558211 HLA-DQA1Q5Y7H0 255 aa11.13□□□□□ -0.63
HMGB1P8-201ENST00000558211 TCTN3Q6NUS6 607 aa11.13□□□□□ -0.63
HMGB1P8-201ENST00000558211 SLC2A7Q6PXP3 512 aa11.13□□□□□ -0.63
HMGB1P8-201ENST00000558211 LINC00696Q6ZRV3 163 aa11.13□□□□□ -0.63
HMGB1P8-201ENST00000558211 ZNF621Q6ZSS3 439 aa11.13□□□□□ -0.63
HMGB1P8-201ENST00000558211 C9orf40Q8IXQ3 194 aa11.13□□□□□ -0.63
HMGB1P8-201ENST00000558211 ZNF615Q8N8J6 731 aa11.13□□□□□ -0.63
HMGB1P8-201ENST00000558211 CCDC197Q8NCU1 140 aa11.13□□□□□ -0.63
HMGB1P8-201ENST00000558211 NUP43Q8NFH3 380 aa11.13□□□□□ -0.63
HMGB1P8-201ENST00000558211 OR7G1Q8NGA0 311 aa11.13□□□□□ -0.63
HMGB1P8-201ENST00000558211 C16orf52Q8NHV5 167 aa11.13□□□□□ -0.63
HMGB1P8-201ENST00000558211 ITCHQ96J02 903 aa11.13□□□□□ -0.63
HMGB1P8-201ENST00000558211 PANX1Q96RD7 426 aa11.13□□□□□ -0.63
HMGB1P8-201ENST00000558211 YIPF4Q9BSR8 244 aa11.13□□□□□ -0.63
HMGB1P8-201ENST00000558211 SLC25A23Q9BV35 468 aa11.13□□□□□ -0.63
HMGB1P8-201ENST00000558211 SEMA4CQ9C0C4 833 aa11.13□□□□□ -0.63
HMGB1P8-201ENST00000558211 RMND5AQ9H871 391 aa11.13□□□□□ -0.63
HMGB1P8-201ENST00000558211 SIRT3Q9NTG7 399 aaPredicted RBP11.13□□□□□ -0.63
HMGB1P8-201ENST00000558211 ZCCHC3Q9NUD5 404 aaKnown RBP11.13□□□□□ -0.63
HMGB1P8-201ENST00000558211 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.13□□□□□ -0.63
HMGB1P8-201ENST00000558211 TAS2R9Q9NYW1 312 aa11.13□□□□□ -0.63
HMGB1P8-201ENST00000558211 BTNL2Q9UIR0 455 aa11.13□□□□□ -0.63
HMGB1P8-201ENST00000558211 PPIEQ9UNP9 301 aaKnown RBP11.13□□□□□ -0.63
HMGB1P8-201ENST00000558211 C2orf92A0A1B0GVN3 265 aa11.12□□□□□ -0.63
HMGB1P8-201ENST00000558211 PLOD2O00469 737 aa11.12□□□□□ -0.63
HMGB1P8-201ENST00000558211 RFXANKO14593 260 aa11.12□□□□□ -0.63
HMGB1P8-201ENST00000558211 PLOD3O60568 738 aa11.12□□□□□ -0.63
HMGB1P8-201ENST00000558211 PRAMEF2O60811 474 aa11.12□□□□□ -0.63
HMGB1P8-201ENST00000558211 COQ9O75208 318 aa11.12□□□□□ -0.63
HMGB1P8-201ENST00000558211 BCAS2O75934 225 aaPredicted RBP11.12□□□□□ -0.63
HMGB1P8-201ENST00000558211 F10P00742 488 aa11.12□□□□□ -0.63
HMGB1P8-201ENST00000558211 EMDP50402 254 aa11.12□□□□□ -0.63
HMGB1P8-201ENST00000558211 CASP9P55211 416 aa11.12□□□□□ -0.63
HMGB1P8-201ENST00000558211 POLE2P56282 527 aa11.12□□□□□ -0.63
HMGB1P8-201ENST00000558211 CBX1P83916 185 aa11.12□□□□□ -0.63
HMGB1P8-201ENST00000558211 ZNF155Q12901 538 aaPredicted RBP11.12□□□□□ -0.63
HMGB1P8-201ENST00000558211 TP53BP2Q13625 1128 aa11.12□□□□□ -0.63
HMGB1P8-201ENST00000558211 RCAN2Q14206 197 aa11.12□□□□□ -0.63
HMGB1P8-201ENST00000558211 MYBPC3Q14896 1274 aa11.12□□□□□ -0.63
HMGB1P8-201ENST00000558211 NNATQ16517 81 aa11.12□□□□□ -0.63
HMGB1P8-201ENST00000558211 LINC00303Q3SY05 128 aa11.12□□□□□ -0.63
HMGB1P8-201ENST00000558211 FHL5Q5TD97 284 aa11.12□□□□□ -0.63
HMGB1P8-201ENST00000558211 AGAP7PQ5VUJ5 663 aa11.12□□□□□ -0.63
HMGB1P8-201ENST00000558211 JMJD6Q6NYC1 403 aaPredicted RBP11.12□□□□□ -0.63
HMGB1P8-201ENST00000558211 WDR53Q7Z5U6 358 aaPredicted RBP11.12□□□□□ -0.63
HMGB1P8-201ENST00000558211 ZAR1Q86SH2 424 aa11.12□□□□□ -0.63
HMGB1P8-201ENST00000558211 RPS19BP1Q86WX3 136 aaKnown RBP11.12□□□□□ -0.63
HMGB1P8-201ENST00000558211 SNX32Q86XE0 403 aa11.12□□□□□ -0.63
HMGB1P8-201ENST00000558211 SLC5A8Q8N695 610 aa11.12□□□□□ -0.63
HMGB1P8-201ENST00000558211 POU5F2Q8N7G0 328 aa11.12□□□□□ -0.63
HMGB1P8-201ENST00000558211 OR5L2Q8NGL0 311 aa11.12□□□□□ -0.63
HMGB1P8-201ENST00000558211 FBXO30Q8TB52 745 aa11.12□□□□□ -0.63
HMGB1P8-201ENST00000558211 PSMF1Q92530 271 aa11.12□□□□□ -0.63
HMGB1P8-201ENST00000558211 FAM120BQ96EK7 910 aaKnown RBP11.12□□□□□ -0.63
HMGB1P8-201ENST00000558211 CCDC115Q96NT0 180 aa11.12□□□□□ -0.63
HMGB1P8-201ENST00000558211 AGAP4Q96P64 663 aa11.12□□□□□ -0.63
HMGB1P8-201ENST00000558211 PSMG3-AS1Q96PY0 264 aa11.12□□□□□ -0.63
HMGB1P8-201ENST00000558211 ITPAQ9BY32 194 aa11.12□□□□□ -0.63
HMGB1P8-201ENST00000558211 ZNF552Q9H707 407 aaPredicted RBP11.12□□□□□ -0.63
HMGB1P8-201ENST00000558211 FOLH1BQ9HBA9 442 aa11.12□□□□□ -0.63
HMGB1P8-201ENST00000558211 STMN3Q9NZ72 180 aa11.12□□□□□ -0.63
HMGB1P8-201ENST00000558211 PRODH2Q9UF12 536 aa11.12□□□□□ -0.63
HMGB1P8-201ENST00000558211 C19orf53Q9UNZ5 99 aaPredicted RBP11.12□□□□□ -0.63
HMGB1P8-201ENST00000558211 ERVK-11Q9UQG0 969 aa11.12□□□□□ -0.63
HMGB1P8-201ENST00000558211 CFL2Q9Y281 166 aa11.12□□□□□ -0.63
HMGB1P8-201ENST00000558211 DTX4Q9Y2E6 619 aa11.12□□□□□ -0.63
HMGB1P8-201ENST00000558211 NDUFAF1Q9Y375 327 aa11.12□□□□□ -0.63
HMGB1P8-201ENST00000558211 A0A087WV62 115 aa11.11□□□□□ -0.63
HMGB1P8-201ENST00000558211 RNF103-CHMP3A0A140T963 221 aa11.11□□□□□ -0.63
HMGB1P8-201ENST00000558211 A0A1W2PP18 115 aa11.11□□□□□ -0.63
HMGB1P8-201ENST00000558211 ASPDHA6ND91 283 aa11.11□□□□□ -0.63
HMGB1P8-201ENST00000558211 OR6C76A6NM76 312 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms