RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 LILRB4Q8NHJ6 448 aa5.19□□□□□ -1.58
RTF1-204ENST00000558117 GSDMBQ8TAX9 411 aa5.19□□□□□ -1.58
RTF1-204ENST00000558117 TAF4BQ92750 862 aa5.19□□□□□ -1.58
RTF1-204ENST00000558117 ALG14Q96F25 216 aa5.19□□□□□ -1.58
RTF1-204ENST00000558117 ZNF583Q96ND8 569 aa5.19□□□□□ -1.58
RTF1-204ENST00000558117 APOOQ9BUR5 198 aa5.19□□□□□ -1.58
RTF1-204ENST00000558117 PLEKHF2Q9H8W4 249 aa5.19□□□□□ -1.58
RTF1-204ENST00000558117 COPS7BQ9H9Q2 264 aaPredicted RBP5.19□□□□□ -1.58
RTF1-204ENST00000558117 DDX19AQ9NUU7 478 aaKnown RBP5.19□□□□□ -1.58
RTF1-204ENST00000558117 ADPRHL2Q9NX46 363 aa5.19□□□□□ -1.58
RTF1-204ENST00000558117 ANAPC5Q9UJX4 755 aa5.19□□□□□ -1.58
RTF1-204ENST00000558117 BLOC1S6Q9UL45 172 aa5.19□□□□□ -1.58
RTF1-204ENST00000558117 NENFQ9UMX5 172 aa5.19□□□□□ -1.58
RTF1-204ENST00000558117 ITM2BQ9Y287 266 aa5.19□□□□□ -1.58
RTF1-204ENST00000558117 DYNC2H1Q8NCM8 4307 aaKnown RBP5.19□□□□□ -1.58
RTF1-204ENST00000558117 TRIM49BA6NDI0 452 aa5.18□□□□□ -1.58
RTF1-204ENST00000558117 C5orf60A6NFR6 353 aa5.18□□□□□ -1.58
RTF1-204ENST00000558117 URADA6NGE7 173 aa5.18□□□□□ -1.58
RTF1-204ENST00000558117 TMEM178BH3BS89 294 aa5.18□□□□□ -1.58
RTF1-204ENST00000558117 PSMA7O14818 248 aa5.18□□□□□ -1.58
RTF1-204ENST00000558117 ACSL4O60488 711 aa5.18□□□□□ -1.58
RTF1-204ENST00000558117 SOCS5O75159 536 aa5.18□□□□□ -1.58
RTF1-204ENST00000558117 GPC4O75487 556 aa5.18□□□□□ -1.58
RTF1-204ENST00000558117 TPPPO94811 219 aa5.18□□□□□ -1.58
RTF1-204ENST00000558117 CAPN1P07384 714 aa5.18□□□□□ -1.58
RTF1-204ENST00000558117 RAB40ALP0C0E4 278 aa5.18□□□□□ -1.58
RTF1-204ENST00000558117 CCNB1P14635 433 aa5.18□□□□□ -1.58
RTF1-204ENST00000558117 PDGFRAP16234 1089 aa5.18□□□□□ -1.58
RTF1-204ENST00000558117 SAT1P21673 171 aa5.18□□□□□ -1.58
RTF1-204ENST00000558117 TCEA1P23193 301 aaKnown RBP5.18□□□□□ -1.58
RTF1-204ENST00000558117 ANOS1P23352 680 aa5.18□□□□□ -1.58
RTF1-204ENST00000558117 CCT6AP40227 531 aaKnown RBP5.18□□□□□ -1.58
RTF1-204ENST00000558117 IL1RL1Q01638 556 aa5.18□□□□□ -1.58
RTF1-204ENST00000558117 PPA1Q15181 289 aa5.18□□□□□ -1.58
RTF1-204ENST00000558117 WSCD2Q2TBF2 565 aa5.18□□□□□ -1.58
RTF1-204ENST00000558117 C9orf152Q5JTZ5 239 aa5.18□□□□□ -1.58
RTF1-204ENST00000558117 SHQ1Q6PI26 577 aaKnown RBP5.18□□□□□ -1.58
RTF1-204ENST00000558117 C12orf54Q6X4T0 127 aa5.18□□□□□ -1.58
RTF1-204ENST00000558117 MEX3DQ86XN8 651 aaKnown RBP5.18□□□□□ -1.58
RTF1-204ENST00000558117 PM20D2Q8IYS1 436 aa5.18□□□□□ -1.58
RTF1-204ENST00000558117 CLEC1AQ8NC01 280 aa5.18□□□□□ -1.58
RTF1-204ENST00000558117 RBM15BQ8NDT2 890 aaKnown RBP5.18□□□□□ -1.58
RTF1-204ENST00000558117 PHF21AQ96BD5 680 aa5.18□□□□□ -1.58
RTF1-204ENST00000558117 LINGO1Q96FE5 620 aa5.18□□□□□ -1.58
RTF1-204ENST00000558117 PPP1R16AQ96I34 528 aa5.18□□□□□ -1.58
RTF1-204ENST00000558117 CABS1Q96KC9 395 aa5.18□□□□□ -1.58
RTF1-204ENST00000558117 FER1L6-AS2Q96M78 137 aa5.18□□□□□ -1.58
RTF1-204ENST00000558117 TSGA13Q96PP4 275 aa5.18□□□□□ -1.58
RTF1-204ENST00000558117 CITED2Q99967 270 aaPredicted RBP5.18□□□□□ -1.58
RTF1-204ENST00000558117 FAM213AQ9BRX8 229 aa5.18□□□□□ -1.58
RTF1-204ENST00000558117 LRRC1Q9BTT6 524 aa5.18□□□□□ -1.58
RTF1-204ENST00000558117 THUMPD3Q9BV44 507 aaKnown RBP5.18□□□□□ -1.58
RTF1-204ENST00000558117 TSPY26PQ9H489 355 aa5.18□□□□□ -1.58
RTF1-204ENST00000558117 ST6GALNAC4Q9H4F1 302 aa5.18□□□□□ -1.58
RTF1-204ENST00000558117 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.18□□□□□ -1.58
RTF1-204ENST00000558117 COQ3Q9NZJ6 369 aa5.18□□□□□ -1.58
RTF1-204ENST00000558117 OGFRQ9NZT2 677 aa5.18□□□□□ -1.58
RTF1-204ENST00000558117 CPSF2Q9P2I0 782 aaKnown RBP5.18□□□□□ -1.58
RTF1-204ENST00000558117 DNAJB9Q9UBS3 223 aa5.18□□□□□ -1.58
RTF1-204ENST00000558117 XPO7Q9UIA9 1087 aaKnown RBP5.18□□□□□ -1.58
RTF1-204ENST00000558117 OR1A2Q9Y585 309 aa5.18□□□□□ -1.58
RTF1-204ENST00000558117 SACSQ9NZJ4 4579 aa5.18□□□□□ -1.58
RTF1-204ENST00000558117 A0A0U1RQK1 487 aa5.17□□□□□ -1.58
RTF1-204ENST00000558117 ZNF320A2RRD8 509 aa5.17□□□□□ -1.58
RTF1-204ENST00000558117 IDSB3KWA1 339 aa5.17□□□□□ -1.58
RTF1-204ENST00000558117 DEXIO95424 95 aa5.17□□□□□ -1.58
RTF1-204ENST00000558117 IGLV3-27P01718 113 aa5.17□□□□□ -1.58
RTF1-204ENST00000558117 TUBBP07437 444 aa5.17□□□□□ -1.58
RTF1-204ENST00000558117 CCDC175P0C221 793 aa5.17□□□□□ -1.58
RTF1-204ENST00000558117 MYBL1P10243 752 aa5.17□□□□□ -1.58
RTF1-204ENST00000558117 GM2AP17900 193 aa5.17□□□□□ -1.58
RTF1-204ENST00000558117 IDSP22304 550 aa5.17□□□□□ -1.58
RTF1-204ENST00000558117 LMAN1P49257 510 aa5.17□□□□□ -1.58
RTF1-204ENST00000558117 CD81P60033 236 aa5.17□□□□□ -1.58
RTF1-204ENST00000558117 YWHAGP61981 247 aaKnown RBP eCLIP5.17□□□□□ -1.58
RTF1-204ENST00000558117 RPL24P83731 157 aaKnown RBP5.17□□□□□ -1.58
RTF1-204ENST00000558117 NECTIN1Q15223 517 aa5.17□□□□□ -1.58
RTF1-204ENST00000558117 INAQ16352 499 aa5.17□□□□□ -1.58
RTF1-204ENST00000558117 KLHL40Q2TBA0 621 aa5.17□□□□□ -1.58
RTF1-204ENST00000558117 RAB6CQ53S08 254 aa5.17□□□□□ -1.58
RTF1-204ENST00000558117 MS4A13Q5J8X5 152 aa5.17□□□□□ -1.58
RTF1-204ENST00000558117 RAB12Q6IQ22 244 aa5.17□□□□□ -1.58
RTF1-204ENST00000558117 KRT80Q6KB66 452 aa5.17□□□□□ -1.58
RTF1-204ENST00000558117 ABRAXAS1Q6UWZ7 409 aa5.17□□□□□ -1.58
RTF1-204ENST00000558117 GSG1LQ6UXU4 331 aa5.17□□□□□ -1.58
RTF1-204ENST00000558117 ZNF704Q6ZNC4 412 aaPredicted RBP5.17□□□□□ -1.58
RTF1-204ENST00000558117 NFE4Q86UQ8 179 aa5.17□□□□□ -1.58
RTF1-204ENST00000558117 SLC5A8Q8N695 610 aa5.17□□□□□ -1.58
RTF1-204ENST00000558117 C12orf29Q8N999 325 aa5.17□□□□□ -1.58
RTF1-204ENST00000558117 SLC24A4Q8NFF2 622 aa5.17□□□□□ -1.58
RTF1-204ENST00000558117 OR56A4Q8NGH8 313 aa5.17□□□□□ -1.58
RTF1-204ENST00000558117 AGAP11Q8TF27 550 aa5.17□□□□□ -1.58
RTF1-204ENST00000558117 GRK7Q8WTQ7 553 aa5.17□□□□□ -1.58
RTF1-204ENST00000558117 TMEM255BQ8WV15 326 aa5.17□□□□□ -1.58
RTF1-204ENST00000558117 MR1Q95460 341 aa5.17□□□□□ -1.58
RTF1-204ENST00000558117 FAM162AQ96A26 154 aa5.17□□□□□ -1.58
RTF1-204ENST00000558117 PGAM5Q96HS1 289 aa5.17□□□□□ -1.58
RTF1-204ENST00000558117 C9orf72Q96LT7 481 aa5.17□□□□□ -1.58
RTF1-204ENST00000558117 GBP5Q96PP8 586 aa5.17□□□□□ -1.58
RTF1-204ENST00000558117 RAB3IPQ96QF0 476 aaPredicted RBP5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms