RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 RCN3Q96D15 328 aa19.64■□□□□ 0.73
CASC4-204ENST00000557945 CMTM5Q96DZ9 223 aa19.64■□□□□ 0.73
CASC4-204ENST00000557945 HSPBAP1Q96EW2 488 aa19.64■□□□□ 0.73
CASC4-204ENST00000557945 AURKBQ96GD4 344 aaPredicted RBP19.64■□□□□ 0.73
CASC4-204ENST00000557945 MAP10Q9P2G4 905 aa19.64■□□□□ 0.73
CASC4-204ENST00000557945 A8MVJ9 347 aa19.63■□□□□ 0.73
CASC4-204ENST00000557945 CD96P40200 585 aa19.63■□□□□ 0.73
CASC4-204ENST00000557945 CYB561P49447 251 aa19.63■□□□□ 0.73
CASC4-204ENST00000557945 HLCSP50747 726 aa19.63■□□□□ 0.73
CASC4-204ENST00000557945 CBX1P83916 185 aa19.63■□□□□ 0.73
CASC4-204ENST00000557945 PLCXD2Q0VAA5 305 aa19.63■□□□□ 0.73
CASC4-204ENST00000557945 TUBA3CQ13748 450 aa19.63■□□□□ 0.73
CASC4-204ENST00000557945 LACTB2Q53H82 288 aaPredicted RBP19.63■□□□□ 0.73
CASC4-204ENST00000557945 COQ5Q5HYK3 327 aa19.63■□□□□ 0.73
CASC4-204ENST00000557945 TUBA3EQ6PEY2 450 aa19.63■□□□□ 0.73
CASC4-204ENST00000557945 IGFL2Q6UWQ7 119 aa19.63■□□□□ 0.73
CASC4-204ENST00000557945 IL20RBQ6UXL0 311 aa19.63■□□□□ 0.73
CASC4-204ENST00000557945 PCYOX1LQ8NBM8 494 aa19.63■□□□□ 0.73
CASC4-204ENST00000557945 OR4N2Q8NGD1 307 aa19.63■□□□□ 0.73
CASC4-204ENST00000557945 OR5D16Q8NGK9 328 aa19.63■□□□□ 0.73
CASC4-204ENST00000557945 PIK3R3Q92569 461 aa19.63■□□□□ 0.73
CASC4-204ENST00000557945 OR7D2Q96RA2 312 aa19.63■□□□□ 0.73
CASC4-204ENST00000557945 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.63■□□□□ 0.73
CASC4-204ENST00000557945 TPT1P8Q9HAU6 139 aa19.63■□□□□ 0.73
CASC4-204ENST00000557945 HPF1Q9NWY4 346 aa19.63■□□□□ 0.73
CASC4-204ENST00000557945 SLC25A37Q9NYZ2 338 aa19.63■□□□□ 0.73
CASC4-204ENST00000557945 NPFFR2Q9Y5X5 522 aa19.63■□□□□ 0.73
CASC4-204ENST00000557945 GXYLT2A0PJZ3 443 aa19.62■□□□□ 0.73
CASC4-204ENST00000557945 OR5H15A6NDH6 313 aa19.62■□□□□ 0.73
CASC4-204ENST00000557945 CLIC1O00299 241 aa19.62■□□□□ 0.73
CASC4-204ENST00000557945 TO15178 435 aa19.62■□□□□ 0.73
CASC4-204ENST00000557945 NKX2-2O95096 273 aa19.62■□□□□ 0.73
CASC4-204ENST00000557945 ABCD3P28288 659 aa19.62■□□□□ 0.73
CASC4-204ENST00000557945 TRHRP34981 398 aaPredicted RBP19.62■□□□□ 0.73
CASC4-204ENST00000557945 MAP3K8P41279 467 aa19.62■□□□□ 0.73
CASC4-204ENST00000557945 TNFAIP8L2Q6P589 184 aaPredicted RBP19.62■□□□□ 0.73
CASC4-204ENST00000557945 DLEU7Q6UYE1 221 aa19.62■□□□□ 0.73
CASC4-204ENST00000557945 MSRB3Q8IXL7 192 aa19.62■□□□□ 0.73
CASC4-204ENST00000557945 SLC34A3Q8N130 599 aa19.62■□□□□ 0.73
CASC4-204ENST00000557945 FITM2Q8N6M3 262 aa19.62■□□□□ 0.73
CASC4-204ENST00000557945 COX18Q8N8Q8 333 aa19.62■□□□□ 0.73
CASC4-204ENST00000557945 HAS2Q92819 552 aa19.62■□□□□ 0.73
CASC4-204ENST00000557945 HOXB13Q92826 284 aaPredicted RBP19.62■□□□□ 0.73
CASC4-204ENST00000557945 CDS1Q92903 461 aa19.62■□□□□ 0.73
CASC4-204ENST00000557945 TMBIM1Q969X1 311 aa19.62■□□□□ 0.73
CASC4-204ENST00000557945 OMA1Q96E52 524 aa19.62■□□□□ 0.73
CASC4-204ENST00000557945 RNF32Q9H0A6 362 aa19.62■□□□□ 0.73
CASC4-204ENST00000557945 OR51I1Q9H343 314 aa19.62■□□□□ 0.73
CASC4-204ENST00000557945 PIGUQ9H490 435 aa19.62■□□□□ 0.73
CASC4-204ENST00000557945 SERHL2Q9H4I8 314 aa19.62■□□□□ 0.73
CASC4-204ENST00000557945 VAPAQ9P0L0 249 aa19.62■□□□□ 0.73
CASC4-204ENST00000557945 CBLCQ9ULV8 474 aa19.62■□□□□ 0.73
CASC4-204ENST00000557945 CNTRLQ7Z7A1 2325 aa19.62■□□□□ 0.73
CASC4-204ENST00000557945 AIM2O14862 343 aa19.61■□□□□ 0.73
CASC4-204ENST00000557945 REM1O75628 298 aa19.61■□□□□ 0.73
CASC4-204ENST00000557945 SFTPCP11686 197 aa19.61■□□□□ 0.73
CASC4-204ENST00000557945 HOXB9P17482 250 aaPredicted RBP19.61■□□□□ 0.73
CASC4-204ENST00000557945 PRDX6P30041 224 aa19.61■□□□□ 0.73
CASC4-204ENST00000557945 KRT20P35900 424 aa19.61■□□□□ 0.73
CASC4-204ENST00000557945 RFX3P48380 749 aa19.61■□□□□ 0.73
CASC4-204ENST00000557945 KHKP50053 298 aa19.61■□□□□ 0.73
CASC4-204ENST00000557945 PSPHP78330 225 aa19.61■□□□□ 0.73
CASC4-204ENST00000557945 CAPRIN1Q14444 709 aaKnown RBP19.61■□□□□ 0.73
CASC4-204ENST00000557945 TRMT5Q32P41 509 aaKnown RBP19.61■□□□□ 0.73
CASC4-204ENST00000557945 CYP27C1Q4G0S4 372 aa19.61■□□□□ 0.73
CASC4-204ENST00000557945 CYP4Z2PQ8N1L4 340 aa19.61■□□□□ 0.73
CASC4-204ENST00000557945 CATSPER1Q8NEC5 780 aa19.61■□□□□ 0.73
CASC4-204ENST00000557945 OR5M3Q8NGP4 307 aa19.61■□□□□ 0.73
CASC4-204ENST00000557945 RMND5BQ96G75 393 aaPredicted RBP19.61■□□□□ 0.73
CASC4-204ENST00000557945 SLC35A4Q96G79 324 aa19.61■□□□□ 0.73
CASC4-204ENST00000557945 STACQ99469 402 aa19.61■□□□□ 0.73
CASC4-204ENST00000557945 DUSP22Q9NRW4 184 aa19.61■□□□□ 0.73
CASC4-204ENST00000557945 LRFN1Q9P244 771 aa19.61■□□□□ 0.73
CASC4-204ENST00000557945 TNRC6AQ8NDV7 1962 aaKnown RBP19.61■□□□□ 0.73
CASC4-204ENST00000557945 CPAMD8Q8IZJ3 1885 aa19.6■□□□□ 0.73
CASC4-204ENST00000557945 DUXAA6NLW8 204 aa19.6■□□□□ 0.73
CASC4-204ENST00000557945 UNC5CO95185 931 aa19.6■□□□□ 0.73
CASC4-204ENST00000557945 FBXO45P0C2W1 286 aa19.6■□□□□ 0.73
CASC4-204ENST00000557945 OR12D1P0DN82 309 aa19.6■□□□□ 0.73
CASC4-204ENST00000557945 CRATP43155 626 aa19.6■□□□□ 0.73
CASC4-204ENST00000557945 CD97P48960 835 aa19.6■□□□□ 0.73
CASC4-204ENST00000557945 MAN2A2P49641 1150 aa19.6■□□□□ 0.73
CASC4-204ENST00000557945 TMED10P49755 219 aaKnown RBP19.6■□□□□ 0.73
CASC4-204ENST00000557945 ANXA11P50995 505 aaKnown RBP19.6■□□□□ 0.73
CASC4-204ENST00000557945 LY6DQ14210 128 aa19.6■□□□□ 0.73
CASC4-204ENST00000557945 OR1C1Q15619 314 aa19.6■□□□□ 0.73
CASC4-204ENST00000557945 DECR1Q16698 335 aa19.6■□□□□ 0.73
CASC4-204ENST00000557945 COX20Q5RI15 118 aa19.6■□□□□ 0.73
CASC4-204ENST00000557945 EXOSC6Q5RKV6 272 aaKnown RBP19.6■□□□□ 0.73
CASC4-204ENST00000557945 DDX59Q5T1V6 619 aaKnown RBP eCLIP19.6■□□□□ 0.73
CASC4-204ENST00000557945 SPINK14Q6IE38 97 aa19.6■□□□□ 0.73
CASC4-204ENST00000557945 LYPD8Q6UX82 237 aa19.6■□□□□ 0.73
CASC4-204ENST00000557945 IGFL3Q6UXB1 125 aa19.6■□□□□ 0.73
CASC4-204ENST00000557945 HPS6Q86YV9 775 aa19.6■□□□□ 0.73
CASC4-204ENST00000557945 GPALPP1Q8IXQ4 340 aa19.6■□□□□ 0.73
CASC4-204ENST00000557945 HORMAD2Q8N7B1 307 aa19.6■□□□□ 0.73
CASC4-204ENST00000557945 FAM13CQ8NE31 585 aa19.6■□□□□ 0.73
CASC4-204ENST00000557945 MIPOL1Q8TD10 442 aa19.6■□□□□ 0.73
CASC4-204ENST00000557945 SPACA9Q96E40 222 aaPredicted RBP19.6■□□□□ 0.73
CASC4-204ENST00000557945 CGREF1Q99674 301 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms