RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 BBS1Q8NFJ9 593 aa16.63■□□□□ 0.25
XRCC3-218ENST00000557439 NLGN4YQ8NFZ3 816 aaPredicted RBP16.63■□□□□ 0.25
XRCC3-218ENST00000557439 SLC38A1Q9H2H9 487 aa16.63■□□□□ 0.25
XRCC3-218ENST00000557439 WBP11Q9Y2W2 641 aaKnown RBP16.63■□□□□ 0.25
XRCC3-218ENST00000557439 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.63■□□□□ 0.25
XRCC3-218ENST00000557439 DVL2O14641 736 aa16.63■□□□□ 0.25
XRCC3-218ENST00000557439 GJA4P35212 333 aa16.63■□□□□ 0.25
XRCC3-218ENST00000557439 SEC13P55735 322 aa16.63■□□□□ 0.25
XRCC3-218ENST00000557439 EFNB1P98172 346 aa16.63■□□□□ 0.25
XRCC3-218ENST00000557439 ZNF730Q6ZMV8 503 aa16.63■□□□□ 0.25
XRCC3-218ENST00000557439 BBS10Q8TAM1 723 aa16.63■□□□□ 0.25
XRCC3-218ENST00000557439 ZFPM2Q8WW38 1151 aa16.63■□□□□ 0.25
XRCC3-218ENST00000557439 SMARCD2Q92925 531 aa16.63■□□□□ 0.25
XRCC3-218ENST00000557439 OTULINQ96BN8 352 aa16.63■□□□□ 0.25
XRCC3-218ENST00000557439 CTRCQ99895 268 aa16.63■□□□□ 0.25
XRCC3-218ENST00000557439 CCDC32Q9BV29 185 aa16.63■□□□□ 0.25
XRCC3-218ENST00000557439 FAIM2Q9BWQ8 316 aa16.63■□□□□ 0.25
XRCC3-218ENST00000557439 TEX101Q9BY14 249 aa16.63■□□□□ 0.25
XRCC3-218ENST00000557439 ZSCAN32Q9NX65 697 aa16.63■□□□□ 0.25
XRCC3-218ENST00000557439 BOLA1Q9Y3E2 137 aa16.63■□□□□ 0.25
XRCC3-218ENST00000557439 DNMT3AQ9Y6K1 912 aaPredicted RBP16.63■□□□□ 0.25
XRCC3-218ENST00000557439 DENND4AQ7Z401 1863 aa16.63■□□□□ 0.25
XRCC3-218ENST00000557439 DNAJB6O75190 326 aa16.62■□□□□ 0.25
XRCC3-218ENST00000557439 KAT7O95251 611 aa16.62■□□□□ 0.25
XRCC3-218ENST00000557439 DRD2P14416 443 aa16.62■□□□□ 0.25
XRCC3-218ENST00000557439 HTR3AP46098 478 aa16.62■□□□□ 0.25
XRCC3-218ENST00000557439 TMEM240Q5SV17 173 aa16.62■□□□□ 0.25
XRCC3-218ENST00000557439 TRIM69Q86WT6 500 aa16.62■□□□□ 0.25
XRCC3-218ENST00000557439 NATD1Q8N6N6 113 aa16.62■□□□□ 0.25
XRCC3-218ENST00000557439 FLCNQ8NFG4 579 aa16.62■□□□□ 0.25
XRCC3-218ENST00000557439 NUP43Q8NFH3 380 aa16.62■□□□□ 0.25
XRCC3-218ENST00000557439 OR52P1PQ8NH57 321 aa16.62■□□□□ 0.25
XRCC3-218ENST00000557439 TEX47Q8TBZ9 253 aa16.62■□□□□ 0.25
XRCC3-218ENST00000557439 SLC25A46Q96AG3 418 aa16.62■□□□□ 0.25
XRCC3-218ENST00000557439 ZNF486Q96H40 463 aaPredicted RBP16.62■□□□□ 0.25
XRCC3-218ENST00000557439 DIRAS2Q96HU8 199 aa16.62■□□□□ 0.25
XRCC3-218ENST00000557439 ADAM29Q9UKF5 820 aa16.62■□□□□ 0.25
XRCC3-218ENST00000557439 CENPVL1A0A0U1RR11 272 aa16.62■□□□□ 0.25
XRCC3-218ENST00000557439 EML2O95834 649 aa16.62■□□□□ 0.25
XRCC3-218ENST00000557439 THY1P04216 161 aa16.62■□□□□ 0.25
XRCC3-218ENST00000557439 MYL12AP19105 171 aa16.62■□□□□ 0.25
XRCC3-218ENST00000557439 FUT1P19526 365 aa16.62■□□□□ 0.25
XRCC3-218ENST00000557439 HSD17B2P37059 387 aa16.62■□□□□ 0.25
XRCC3-218ENST00000557439 SMSP52788 366 aa16.62■□□□□ 0.25
XRCC3-218ENST00000557439 WNT4P56705 351 aa16.62■□□□□ 0.25
XRCC3-218ENST00000557439 FABP5Q01469 135 aa16.62■□□□□ 0.25
XRCC3-218ENST00000557439 LRRC32Q14392 662 aa16.62■□□□□ 0.25
XRCC3-218ENST00000557439 MLC1Q15049 377 aa16.62■□□□□ 0.25
XRCC3-218ENST00000557439 ZIC1Q15915 447 aa16.62■□□□□ 0.25
XRCC3-218ENST00000557439 ATAD3CQ5T2N8 411 aa16.62■□□□□ 0.25
XRCC3-218ENST00000557439 VITQ6UXI7 678 aa16.62■□□□□ 0.25
XRCC3-218ENST00000557439 LAPTM4BQ86VI4 370 aa16.62■□□□□ 0.25
XRCC3-218ENST00000557439 ANKK1Q8NFD2 765 aa16.62■□□□□ 0.25
XRCC3-218ENST00000557439 GANCQ8TET4 914 aa16.62■□□□□ 0.25
XRCC3-218ENST00000557439 NT5DC2Q9H857 520 aa16.62■□□□□ 0.25
XRCC3-218ENST00000557439 THAP10Q9P2Z0 257 aaPredicted RBP16.62■□□□□ 0.25
XRCC3-218ENST00000557439 ENTPD4Q9Y227 616 aa16.62■□□□□ 0.25
XRCC3-218ENST00000557439 STON1Q9Y6Q2 735 aa16.62■□□□□ 0.25
XRCC3-218ENST00000557439 LIMS3P0CW19 117 aa16.61■□□□□ 0.25
XRCC3-218ENST00000557439 LIMS4P0CW20 117 aa16.61■□□□□ 0.25
XRCC3-218ENST00000557439 CPEP16870 476 aa16.61■□□□□ 0.25
XRCC3-218ENST00000557439 PKLRP30613 574 aa16.61■□□□□ 0.25
XRCC3-218ENST00000557439 PDX1P52945 283 aa16.61■□□□□ 0.25
XRCC3-218ENST00000557439 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.61■□□□□ 0.25
XRCC3-218ENST00000557439 COX10Q12887 443 aa16.61■□□□□ 0.25
XRCC3-218ENST00000557439 GPR50Q13585 617 aa16.61■□□□□ 0.25
XRCC3-218ENST00000557439 ZNF791Q3KP31 576 aaPredicted RBP16.61■□□□□ 0.25
XRCC3-218ENST00000557439 ENTPD8Q5MY95 495 aa16.61■□□□□ 0.25
XRCC3-218ENST00000557439 FAM111BQ6SJ93 734 aa16.61■□□□□ 0.25
XRCC3-218ENST00000557439 GLCCI1Q86VQ1 547 aa16.61■□□□□ 0.25
XRCC3-218ENST00000557439 UBQLNLQ8IYU4 475 aa16.61■□□□□ 0.25
XRCC3-218ENST00000557439 OR2L3Q8NG85 312 aa16.61■□□□□ 0.25
XRCC3-218ENST00000557439 OR6F1Q8NGZ6 308 aa16.61■□□□□ 0.25
XRCC3-218ENST00000557439 OR4Q3Q8NH05 313 aa16.61■□□□□ 0.25
XRCC3-218ENST00000557439 TMEM163Q8TC26 289 aa16.61■□□□□ 0.25
XRCC3-218ENST00000557439 SP7Q8TDD2 431 aaPredicted RBP16.61■□□□□ 0.25
XRCC3-218ENST00000557439 BEX2Q9BXY8 128 aa16.61■□□□□ 0.25
XRCC3-218ENST00000557439 PLA2G2FQ9BZM2 168 aa16.61■□□□□ 0.25
XRCC3-218ENST00000557439 TMEM74BQ9NUR3 256 aa16.61■□□□□ 0.25
XRCC3-218ENST00000557439 F5P12259 2224 aa16.61■□□□□ 0.25
XRCC3-218ENST00000557439 MN1Q10571 1320 aaPredicted RBP16.61■□□□□ 0.25
XRCC3-218ENST00000557439 FAM183AA6NL82 134 aa16.61■□□□□ 0.25
XRCC3-218ENST00000557439 UBXN7O94888 489 aa16.61■□□□□ 0.25
XRCC3-218ENST00000557439 CEACAM5P06731 702 aa16.61■□□□□ 0.25
XRCC3-218ENST00000557439 TRIM23P36406 574 aa16.61■□□□□ 0.25
XRCC3-218ENST00000557439 MTNR1AP48039 350 aa16.61■□□□□ 0.25
XRCC3-218ENST00000557439 BTN3A2P78410 334 aa16.61■□□□□ 0.25
XRCC3-218ENST00000557439 PDGFRLQ15198 375 aa16.61■□□□□ 0.25
XRCC3-218ENST00000557439 FAM109BQ6ICB4 259 aaPredicted RBP16.61■□□□□ 0.25
XRCC3-218ENST00000557439 SLC27A4Q6P1M0 643 aa16.61■□□□□ 0.25
XRCC3-218ENST00000557439 ZNF517Q6ZMY9 492 aaPredicted RBP16.61■□□□□ 0.25
XRCC3-218ENST00000557439 SLC16A11Q8NCK7 471 aa16.61■□□□□ 0.25
XRCC3-218ENST00000557439 OR4E2Q8NGC2 313 aa16.61■□□□□ 0.25
XRCC3-218ENST00000557439 KATNB1Q9BVA0 655 aa16.61■□□□□ 0.25
XRCC3-218ENST00000557439 TMED9Q9BVK6 235 aa16.61■□□□□ 0.25
XRCC3-218ENST00000557439 HDHD5Q9BXW7 423 aa16.61■□□□□ 0.25
XRCC3-218ENST00000557439 TBC1D17Q9HA65 648 aa16.61■□□□□ 0.25
XRCC3-218ENST00000557439 BCL2L10Q9HD36 194 aa16.61■□□□□ 0.25
XRCC3-218ENST00000557439 COMMD3Q9UBI1 195 aa16.61■□□□□ 0.25
XRCC3-218ENST00000557439 CES1P1Q9UKY3 287 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms