RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 PWWP2BQ6NUJ5 590 aa3.41□□□□□ -1.86
CHD8-212ENST00000557329 RWDD4Q6NW29 188 aaKnown RBP3.41□□□□□ -1.86
CHD8-212ENST00000557329 ARHGAP11AQ6P4F7 1023 aa3.41□□□□□ -1.86
CHD8-212ENST00000557329 XKRXQ6PP77 449 aa3.41□□□□□ -1.86
CHD8-212ENST00000557329 WDR74Q6RFH5 385 aaPredicted RBP3.41□□□□□ -1.86
CHD8-212ENST00000557329 TMEM270Q6UE05 265 aa3.41□□□□□ -1.86
CHD8-212ENST00000557329 RBMS3Q6XE24 437 aaKnown RBP3.41□□□□□ -1.86
CHD8-212ENST00000557329 LINC00696Q6ZRV3 163 aa3.41□□□□□ -1.86
CHD8-212ENST00000557329 ARHGAP22Q7Z5H3 698 aa3.41□□□□□ -1.86
CHD8-212ENST00000557329 BIVMQ86UB2 503 aa3.41□□□□□ -1.86
CHD8-212ENST00000557329 BCORP1Q8N888 145 aa3.41□□□□□ -1.86
CHD8-212ENST00000557329 L3MBTL4Q8NA19 623 aa3.41□□□□□ -1.86
CHD8-212ENST00000557329 SIDT2Q8NBJ9 832 aaKnown RBP3.41□□□□□ -1.86
CHD8-212ENST00000557329 WDR20Q8TBZ3 569 aa3.41□□□□□ -1.86
CHD8-212ENST00000557329 CA5BP1Q8WTZ4 195 aa3.41□□□□□ -1.86
CHD8-212ENST00000557329 IRGQQ8WZA9 623 aa3.41□□□□□ -1.86
CHD8-212ENST00000557329 DHX58Q96C10 678 aa3.41□□□□□ -1.86
CHD8-212ENST00000557329 SGK494Q96LW2 274 aa3.41□□□□□ -1.86
CHD8-212ENST00000557329 FER1L6-AS2Q96M78 137 aa3.41□□□□□ -1.86
CHD8-212ENST00000557329 PSMB7Q99436 277 aa3.41□□□□□ -1.86
CHD8-212ENST00000557329 GFI1Q99684 422 aa3.41□□□□□ -1.86
CHD8-212ENST00000557329 ITPAQ9BY32 194 aa3.41□□□□□ -1.86
CHD8-212ENST00000557329 PHPT1Q9NRX4 125 aaPredicted RBP3.41□□□□□ -1.86
CHD8-212ENST00000557329 C5AR2Q9P296 337 aa3.41□□□□□ -1.86
CHD8-212ENST00000557329 KLHL9Q9P2J3 617 aa3.41□□□□□ -1.86
CHD8-212ENST00000557329 FBXL17Q9UF56 701 aa3.41□□□□□ -1.86
CHD8-212ENST00000557329 RARRES3Q9UL19 164 aa3.41□□□□□ -1.86
CHD8-212ENST00000557329 SLC7A7Q9UM01 511 aa3.41□□□□□ -1.86
CHD8-212ENST00000557329 PLEKHA6Q9Y2H5 1048 aa3.41□□□□□ -1.86
CHD8-212ENST00000557329 CSAG2Q9Y5P2 127 aa3.41□□□□□ -1.86
CHD8-212ENST00000557329 FER1L5A0AVI2 2057 aa3.4□□□□□ -1.86
CHD8-212ENST00000557329 ZGRF1Q86YA3 2104 aa3.4□□□□□ -1.86
CHD8-212ENST00000557329 PRRC2CQ9Y520 2896 aaKnown RBP3.4□□□□□ -1.86
CHD8-212ENST00000557329 CALUO43852 315 aaPredicted RBP3.4□□□□□ -1.87
CHD8-212ENST00000557329 KLHL41O60662 606 aa3.4□□□□□ -1.87
CHD8-212ENST00000557329 SCRG1O75711 98 aa3.4□□□□□ -1.87
CHD8-212ENST00000557329 RECQL5O94762 991 aaPredicted RBP3.4□□□□□ -1.87
CHD8-212ENST00000557329 TPPPO94811 219 aa3.4□□□□□ -1.87
CHD8-212ENST00000557329 EML2O95834 649 aa3.4□□□□□ -1.87
CHD8-212ENST00000557329 IGSF6O95976 241 aa3.4□□□□□ -1.87
CHD8-212ENST00000557329 F10P00742 488 aa3.4□□□□□ -1.87
CHD8-212ENST00000557329 STSP08842 583 aa3.4□□□□□ -1.87
CHD8-212ENST00000557329 CFC1BP0CG36 223 aa3.4□□□□□ -1.87
CHD8-212ENST00000557329 CFC1P0CG37 223 aa3.4□□□□□ -1.87
CHD8-212ENST00000557329 PRSS56P0CW18 603 aa3.4□□□□□ -1.87
CHD8-212ENST00000557329 ERVK-10P10266 1014 aa3.4□□□□□ -1.87
CHD8-212ENST00000557329 SELLP14151 372 aa3.4□□□□□ -1.87
CHD8-212ENST00000557329 GABRB1P18505 474 aa3.4□□□□□ -1.87
CHD8-212ENST00000557329 MSH3P20585 1137 aa3.4□□□□□ -1.87
CHD8-212ENST00000557329 SLC6A6P31641 620 aa3.4□□□□□ -1.87
CHD8-212ENST00000557329 MMP15P51511 669 aa3.4□□□□□ -1.87
CHD8-212ENST00000557329 LINC01547P58512 204 aaPredicted RBP3.4□□□□□ -1.87
CHD8-212ENST00000557329 YWHAEP62258 255 aaKnown RBP3.4□□□□□ -1.87
CHD8-212ENST00000557329 SIRPAP78324 504 aa3.4□□□□□ -1.87
CHD8-212ENST00000557329 UBE2V1Q13404 147 aa3.4□□□□□ -1.87
CHD8-212ENST00000557329 KIAA1644Q3SXP7 199 aa3.4□□□□□ -1.87
CHD8-212ENST00000557329 PNCKQ6P2M8 343 aa3.4□□□□□ -1.87
CHD8-212ENST00000557329 CYB5D1Q6P9G0 228 aa3.4□□□□□ -1.87
CHD8-212ENST00000557329 INTS8Q75QN2 995 aaKnown RBP3.4□□□□□ -1.87
CHD8-212ENST00000557329 RAB43Q86YS6 212 aa3.4□□□□□ -1.87
CHD8-212ENST00000557329 GALNT13Q8IUC8 556 aa3.4□□□□□ -1.87
CHD8-212ENST00000557329 PLD3Q8IV08 490 aa3.4□□□□□ -1.87
CHD8-212ENST00000557329 DEFB106AQ8N104 65 aa3.4□□□□□ -1.87
CHD8-212ENST00000557329 TTC39CQ8N584 583 aa3.4□□□□□ -1.87
CHD8-212ENST00000557329 DNAAF3Q8N9W5 541 aa3.4□□□□□ -1.87
CHD8-212ENST00000557329 DCAF4L2Q8NA75 395 aa3.4□□□□□ -1.87
CHD8-212ENST00000557329 ADAD2Q8NCV1 583 aaKnown RBP3.4□□□□□ -1.87
CHD8-212ENST00000557329 RBM15BQ8NDT2 890 aaKnown RBP3.4□□□□□ -1.87
CHD8-212ENST00000557329 CATSPER1Q8NEC5 780 aa3.4□□□□□ -1.87
CHD8-212ENST00000557329 TRIM58Q8NG06 486 aa3.4□□□□□ -1.87
CHD8-212ENST00000557329 OR2T12Q8NG77 320 aa3.4□□□□□ -1.87
CHD8-212ENST00000557329 OR2AP1Q8NGE2 309 aa3.4□□□□□ -1.87
CHD8-212ENST00000557329 GOLGA5Q8TBA6 731 aa3.4□□□□□ -1.87
CHD8-212ENST00000557329 SLC37A2Q8TED4 501 aa3.4□□□□□ -1.87
CHD8-212ENST00000557329 SAT2Q96F10 170 aaPredicted RBP3.4□□□□□ -1.87
CHD8-212ENST00000557329 C14orf79Q96F83 325 aa3.4□□□□□ -1.87
CHD8-212ENST00000557329 EEF2KMTQ96G04 330 aa3.4□□□□□ -1.87
CHD8-212ENST00000557329 LRR1Q96L50 414 aa3.4□□□□□ -1.87
CHD8-212ENST00000557329 C9orf72Q96LT7 481 aa3.4□□□□□ -1.87
CHD8-212ENST00000557329 GDAP1L1Q96MZ0 367 aa3.4□□□□□ -1.87
CHD8-212ENST00000557329 LLPHQ9BRT6 129 aaKnown RBP3.4□□□□□ -1.87
CHD8-212ENST00000557329 TRIM62Q9BVG3 475 aa3.4□□□□□ -1.87
CHD8-212ENST00000557329 RTN4RQ9BZR6 473 aa3.4□□□□□ -1.87
CHD8-212ENST00000557329 POPDC2Q9HBU9 364 aa3.4□□□□□ -1.87
CHD8-212ENST00000557329 HHATLQ9HCP6 504 aa3.4□□□□□ -1.87
CHD8-212ENST00000557329 CHMP1AQ9HD42 196 aaPredicted RBP3.4□□□□□ -1.87
CHD8-212ENST00000557329 ZDHHC18Q9NUE0 388 aa3.4□□□□□ -1.87
CHD8-212ENST00000557329 SEPT11Q9NVA2 429 aaKnown RBP3.4□□□□□ -1.87
CHD8-212ENST00000557329 SOHLH2Q9NX45 425 aa3.4□□□□□ -1.87
CHD8-212ENST00000557329 RAB20Q9NX57 234 aa3.4□□□□□ -1.87
CHD8-212ENST00000557329 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.4□□□□□ -1.87
CHD8-212ENST00000557329 SEC14L3Q9UDX4 400 aa3.4□□□□□ -1.87
CHD8-212ENST00000557329 TRIM10Q9UDY6 481 aa3.4□□□□□ -1.87
CHD8-212ENST00000557329 KCNK6Q9Y257 313 aa3.4□□□□□ -1.87
CHD8-212ENST00000557329 GRIP1Q9Y3R0 1128 aa3.4□□□□□ -1.87
CHD8-212ENST00000557329 OR51B4Q9Y5P0 310 aa3.4□□□□□ -1.87
CHD8-212ENST00000557329 PIKFYVEQ9Y2I7 2098 aa3.39□□□□□ -1.87
CHD8-212ENST00000557329 A0A1W2PN81 502 aa3.39□□□□□ -1.87
CHD8-212ENST00000557329 C9J4A7 227 aa3.39□□□□□ -1.87
CHD8-212ENST00000557329 PTGES3LE9PB15 166 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms