RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 DYNC2LI1Q8TCX1 351 aa9.47□□□□□ -0.89
TMEM260-211ENST00000556648 ADAMTS15Q8TE58 950 aa9.47□□□□□ -0.89
TMEM260-211ENST00000556648 BORCS5Q969J3 196 aa9.47□□□□□ -0.89
TMEM260-211ENST00000556648 RERGQ96A58 199 aaPredicted RBP9.47□□□□□ -0.89
TMEM260-211ENST00000556648 ARSGQ96EG1 525 aa9.47□□□□□ -0.89
TMEM260-211ENST00000556648 TRNT1Q96Q11 434 aaKnown RBP9.47□□□□□ -0.89
TMEM260-211ENST00000556648 LRRC61Q9BV99 259 aa9.47□□□□□ -0.89
TMEM260-211ENST00000556648 SPATA5L1Q9BVQ7 753 aa9.47□□□□□ -0.89
TMEM260-211ENST00000556648 EGLN3Q9H6Z9 239 aa9.47□□□□□ -0.89
TMEM260-211ENST00000556648 SLC25A19Q9HC21 320 aa9.47□□□□□ -0.89
TMEM260-211ENST00000556648 CLN6Q9NWW5 311 aa9.47□□□□□ -0.89
TMEM260-211ENST00000556648 CA14Q9ULX7 337 aa9.47□□□□□ -0.89
TMEM260-211ENST00000556648 A0A087WUU8 490 aa9.46□□□□□ -0.89
TMEM260-211ENST00000556648 NPIPA5A0A0B4J1W7 369 aa9.46□□□□□ -0.89
TMEM260-211ENST00000556648 OR5K3A6NET4 321 aa9.46□□□□□ -0.89
TMEM260-211ENST00000556648 EFCAB9A8MZ26 197 aa9.46□□□□□ -0.89
TMEM260-211ENST00000556648 NPIPA7E9PJI5 369 aa9.46□□□□□ -0.89
TMEM260-211ENST00000556648 CYR61O00622 381 aa9.46□□□□□ -0.89
TMEM260-211ENST00000556648 CASC3O15234 703 aaKnown RBP9.46□□□□□ -0.89
TMEM260-211ENST00000556648 PRKYO43930 277 aa9.46□□□□□ -0.89
TMEM260-211ENST00000556648 PIP5K1CO60331 668 aa9.46□□□□□ -0.89
TMEM260-211ENST00000556648 RDH16O75452 317 aa9.46□□□□□ -0.89
TMEM260-211ENST00000556648 MED26O95402 600 aa9.46□□□□□ -0.89
TMEM260-211ENST00000556648 NADKO95544 446 aaPredicted RBP9.46□□□□□ -0.89
TMEM260-211ENST00000556648 WNT1P04628 370 aa9.46□□□□□ -0.89
TMEM260-211ENST00000556648 NPIPA8P0DM63 369 aa9.46□□□□□ -0.89
TMEM260-211ENST00000556648 MAGEA8P43361 318 aa9.46□□□□□ -0.89
TMEM260-211ENST00000556648 SLC15A1P46059 708 aa9.46□□□□□ -0.89
TMEM260-211ENST00000556648 SMIM11AP58511 58 aa9.46□□□□□ -0.89
TMEM260-211ENST00000556648 TAS2R41P59536 307 aa9.46□□□□□ -0.89
TMEM260-211ENST00000556648 HHEXQ03014 270 aa9.46□□□□□ -0.89
TMEM260-211ENST00000556648 EXOSC7Q15024 291 aaKnown RBP9.46□□□□□ -0.89
TMEM260-211ENST00000556648 INAVAQ3KP66 663 aa9.46□□□□□ -0.89
TMEM260-211ENST00000556648 PRAMEF8Q5VWM4 474 aa9.46□□□□□ -0.89
TMEM260-211ENST00000556648 PRAMEF7Q5VXH5 474 aa9.46□□□□□ -0.89
TMEM260-211ENST00000556648 TYW3Q6IPR3 259 aaKnown RBP9.46□□□□□ -0.89
TMEM260-211ENST00000556648 ACSM5Q6NUN0 579 aa9.46□□□□□ -0.89
TMEM260-211ENST00000556648 ZNF836Q6ZNA1 936 aa9.46□□□□□ -0.89
TMEM260-211ENST00000556648 DGAT2L6Q6ZPD8 337 aa9.46□□□□□ -0.89
TMEM260-211ENST00000556648 PRICKLE2Q7Z3G6 844 aa9.46□□□□□ -0.89
TMEM260-211ENST00000556648 SLC46A3Q7Z3Q1 461 aa9.46□□□□□ -0.89
TMEM260-211ENST00000556648 TCEANCQ8N8B7 351 aa9.46□□□□□ -0.89
TMEM260-211ENST00000556648 OR8D4Q8NGM9 314 aa9.46□□□□□ -0.89
TMEM260-211ENST00000556648 OR52P1PQ8NH57 321 aa9.46□□□□□ -0.89
TMEM260-211ENST00000556648 ZDHHC1Q8WTX9 485 aa9.46□□□□□ -0.89
TMEM260-211ENST00000556648 PIK3R3Q92569 461 aa9.46□□□□□ -0.89
TMEM260-211ENST00000556648 FCGR1BQ92637 280 aa9.46□□□□□ -0.89
TMEM260-211ENST00000556648 DIO2Q92813 273 aa9.46□□□□□ -0.89
TMEM260-211ENST00000556648 IL21RQ9HBE5 538 aa9.46□□□□□ -0.89
TMEM260-211ENST00000556648 ZBTB20Q9HC78 741 aaPredicted RBP9.46□□□□□ -0.89
TMEM260-211ENST00000556648 ADAP2Q9NPF8 381 aa9.46□□□□□ -0.89
TMEM260-211ENST00000556648 NECTIN3Q9NQS3 549 aa9.46□□□□□ -0.89
TMEM260-211ENST00000556648 FBXO34Q9NWN3 711 aa9.46□□□□□ -0.89
TMEM260-211ENST00000556648 CNIH4Q9P003 139 aa9.46□□□□□ -0.89
TMEM260-211ENST00000556648 NTMQ9P121 344 aa9.46□□□□□ -0.89
TMEM260-211ENST00000556648 NDOR1Q9UHB4 597 aa9.46□□□□□ -0.89
TMEM260-211ENST00000556648 ENOPH1Q9UHY7 261 aa9.46□□□□□ -0.89
TMEM260-211ENST00000556648 ZNF443Q9Y2A4 671 aaPredicted RBP9.46□□□□□ -0.89
TMEM260-211ENST00000556648 KLK4Q9Y5K2 254 aa9.46□□□□□ -0.89
TMEM260-211ENST00000556648 KIR2DS5A0A0G2JLQ3 304 aa9.46□□□□□ -0.9
TMEM260-211ENST00000556648 A0A0G2JNG1 304 aa9.46□□□□□ -0.9
TMEM260-211ENST00000556648 KIR2DS3K7RE56 304 aa9.46□□□□□ -0.9
TMEM260-211ENST00000556648 M0R3G1 203 aa9.46□□□□□ -0.9
TMEM260-211ENST00000556648 HSMCR30P0CW71 290 aa9.46□□□□□ -0.9
TMEM260-211ENST00000556648 CKMT1AP12532 417 aa9.46□□□□□ -0.9
TMEM260-211ENST00000556648 CTSEP14091 401 aa9.46□□□□□ -0.9
TMEM260-211ENST00000556648 PORP16435 677 aaPredicted RBP9.46□□□□□ -0.9
TMEM260-211ENST00000556648 NT5EP21589 574 aa9.46□□□□□ -0.9
TMEM260-211ENST00000556648 C21orf59P57076 290 aa9.46□□□□□ -0.9
TMEM260-211ENST00000556648 SNRPGP62308 76 aaKnown RBP9.46□□□□□ -0.9
TMEM260-211ENST00000556648 MLLT1Q03111 559 aaPredicted RBP9.46□□□□□ -0.9
TMEM260-211ENST00000556648 TMED1Q13445 227 aa9.46□□□□□ -0.9
TMEM260-211ENST00000556648 KIR2DS5Q14953 304 aa9.46□□□□□ -0.9
TMEM260-211ENST00000556648 MAPK14Q16539 360 aa9.46□□□□□ -0.9
TMEM260-211ENST00000556648 ZNF829Q3KNS6 432 aaPredicted RBP9.46□□□□□ -0.9
TMEM260-211ENST00000556648 ATAD3BQ5T9A4 648 aa9.46□□□□□ -0.9
TMEM260-211ENST00000556648 USP53Q70EK8 1073 aa9.46□□□□□ -0.9
TMEM260-211ENST00000556648 NKAIN4Q8IVV8 208 aa9.46□□□□□ -0.9
TMEM260-211ENST00000556648 ZNF687Q8N1G0 1237 aa9.46□□□□□ -0.9
TMEM260-211ENST00000556648 AVL9Q8NBF6 648 aa9.46□□□□□ -0.9
TMEM260-211ENST00000556648 WDR36Q8NI36 951 aaKnown RBP9.46□□□□□ -0.9
TMEM260-211ENST00000556648 FNDC8Q8TC99 324 aa9.46□□□□□ -0.9
TMEM260-211ENST00000556648 LGALS12Q96DT0 336 aa9.46□□□□□ -0.9
TMEM260-211ENST00000556648 SH3YL1Q96HL8 342 aaPredicted RBP9.46□□□□□ -0.9
TMEM260-211ENST00000556648 PLEKHA8Q96JA3 519 aa9.46□□□□□ -0.9
TMEM260-211ENST00000556648 BCL7BQ9BQE9 202 aa9.46□□□□□ -0.9
TMEM260-211ENST00000556648 OR51E2Q9H255 320 aa9.46□□□□□ -0.9
TMEM260-211ENST00000556648 LYRM4Q9HD34 91 aa9.46□□□□□ -0.9
TMEM260-211ENST00000556648 TVP23BQ9NYZ1 205 aa9.46□□□□□ -0.9
TMEM260-211ENST00000556648 CLEC2DQ9UHP7 191 aa9.46□□□□□ -0.9
TMEM260-211ENST00000556648 LIPT1Q9Y234 373 aa9.46□□□□□ -0.9
TMEM260-211ENST00000556648 IGHV1OR15-9A0A0B4J2B8 117 aa9.45□□□□□ -0.9
TMEM260-211ENST00000556648 A0A1W2PPC4 97 aa9.45□□□□□ -0.9
TMEM260-211ENST00000556648 SH3D21A4FU49 640 aa9.45□□□□□ -0.9
TMEM260-211ENST00000556648 EFCAB10A6NFE3 127 aa9.45□□□□□ -0.9
TMEM260-211ENST00000556648 URADA6NGE7 173 aa9.45□□□□□ -0.9
TMEM260-211ENST00000556648 FAM170BA6NMN3 283 aa9.45□□□□□ -0.9
TMEM260-211ENST00000556648 SYT5O00445 386 aa9.45□□□□□ -0.9
TMEM260-211ENST00000556648 AIREO43918 545 aa9.45□□□□□ -0.9
TMEM260-211ENST00000556648 GALR3O60755 368 aaPredicted RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms