RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 PRPH2P23942 346 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 CERS1P27544 350 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 EPHA3P29320 983 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 PTPN6P29350 595 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 MPGP29372 298 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 GKP32189 559 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 PCGF2P35227 344 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 SPAM1P38567 509 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 RGRP47804 291 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 ARSFP54793 590 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 ELF3P78545 371 aaPredicted RBP4.82□□□□□ -1.64
SRP54-211ENST00000556445 ECT2LQ008S8 904 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 TRAF2Q12933 501 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 ALKBH1Q13686 389 aaKnown RBP4.82□□□□□ -1.64
SRP54-211ENST00000556445 MAPRE2Q15555 327 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 TEAD2Q15562 447 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 ZNF77Q15935 545 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 SNCBQ16143 134 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 FBXO43Q4G163 708 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 IFI44LQ53G44 452 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 CARD16Q5EG05 197 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 MTX3Q5HYI7 312 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 WASHC2DQ5SRD0 308 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 RARS2Q5T160 578 aaKnown RBP4.82□□□□□ -1.64
SRP54-211ENST00000556445 ZNF626Q68DY1 528 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 METTL2BQ6P1Q9 378 aaKnown RBP4.82□□□□□ -1.64
SRP54-211ENST00000556445 C22orf39Q6P5X5 142 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 CYB5D1Q6P9G0 228 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 TTC23LQ6PF05 361 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 EPGNQ6UW88 154 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 LINGO4Q6UY18 593 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 WDR88Q6ZMY6 472 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 TMEM182Q6ZP80 229 aaPredicted RBP4.82□□□□□ -1.64
SRP54-211ENST00000556445 ZCCHC23Q6ZST2 131 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 TPRG1Q6ZUI0 275 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 SNX20Q7Z614 316 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 ADAMTSL2Q86TH1 951 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 PHC2Q8IXK0 858 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 APCDD1Q8J025 514 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 RBFAQ8N0V3 343 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 AADATQ8N5Z0 425 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 CCNYL1Q8N7R7 359 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 ZNF321PQ8N8H1 164 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 ENDOVQ8N8Q3 282 aaKnown RBP4.82□□□□□ -1.64
SRP54-211ENST00000556445 RASGEF1AQ8N9B8 481 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 PNLDC1Q8NA58 520 aaKnown RBP4.82□□□□□ -1.64
SRP54-211ENST00000556445 SETD9Q8NE22 299 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 FAM110DQ8TAY7 271 aaPredicted RBP4.82□□□□□ -1.64
SRP54-211ENST00000556445 MAGEC3Q8TD91 643 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 DTX3LQ8TDB6 740 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 HEXDCQ8WVB3 486 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 PIH1D2Q8WWB5 315 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 ST6GALNAC6Q969X2 333 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 MCUR1Q96AQ8 359 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 ULK4Q96C45 1275 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 CTHRC1Q96CG8 243 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 L3HYPDHQ96EM0 354 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 SCRN2Q96FV2 425 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 GPR78Q96P69 363 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 PANX3Q96QZ0 392 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 SECISBP2Q96T21 854 aaKnown RBP4.82□□□□□ -1.64
SRP54-211ENST00000556445 SORT1Q99523 831 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 CCT7Q99832 543 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 GAL3ST1Q99999 423 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 BTBD10Q9BSF8 475 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 QTRT1Q9BXR0 403 aaKnown RBP4.82□□□□□ -1.64
SRP54-211ENST00000556445 SLC29A3Q9BZD2 475 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 GPR61Q9BZJ8 451 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 TRIM2Q9C040 744 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 CIPCQ9C0C6 399 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 POMKQ9H5K3 350 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 XKR8Q9H6D3 395 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 TLE6Q9H808 572 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 COG4Q9H9E3 785 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 GPN1Q9HCN4 374 aaPredicted RBP4.82□□□□□ -1.64
SRP54-211ENST00000556445 ASIC5Q9NY37 505 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 PKD2L2Q9NZM6 624 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 STEAP1Q9UHE8 339 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 GNPTGQ9UJJ9 305 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 GBF1Q92538 1859 aa4.81□□□□□ -1.64
SRP54-211ENST00000556445 C15orf38-AP3S2A0A0A6YYH1 394 aa4.81□□□□□ -1.64
SRP54-211ENST00000556445 TRBV5-4A0A0C4DH59 114 aa4.81□□□□□ -1.64
SRP54-211ENST00000556445 C1orf232A0A0U1RR37 186 aa4.81□□□□□ -1.64
SRP54-211ENST00000556445 C13orf42A0A1B0GVH6 325 aa4.81□□□□□ -1.64
SRP54-211ENST00000556445 SERTM2A0A1B0GWG4 89 aa4.81□□□□□ -1.64
SRP54-211ENST00000556445 A8MT66 165 aa4.81□□□□□ -1.64
SRP54-211ENST00000556445 HIDE1A8MVS5 230 aa4.81□□□□□ -1.64
SRP54-211ENST00000556445 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.81□□□□□ -1.64
SRP54-211ENST00000556445 NEDD8-MDP1E9PL57 170 aa4.81□□□□□ -1.64
SRP54-211ENST00000556445 PPP6CO00743 305 aa4.81□□□□□ -1.64
SRP54-211ENST00000556445 CHUKO15111 745 aa4.81□□□□□ -1.64
SRP54-211ENST00000556445 MAGEC1O60732 1142 aa4.81□□□□□ -1.64
SRP54-211ENST00000556445 ZNF254O75437 659 aa4.81□□□□□ -1.64
SRP54-211ENST00000556445 LYPLA1O75608 230 aaPredicted RBP4.81□□□□□ -1.64
SRP54-211ENST00000556445 RHBDL1O75783 438 aa4.81□□□□□ -1.64
SRP54-211ENST00000556445 CIB2O75838 187 aa4.81□□□□□ -1.64
SRP54-211ENST00000556445 NKX2-2O95096 273 aa4.81□□□□□ -1.64
SRP54-211ENST00000556445 WISP3O95389 354 aaPredicted RBP4.81□□□□□ -1.64
SRP54-211ENST00000556445 NFATC1O95644 943 aa4.81□□□□□ -1.64
SRP54-211ENST00000556445 TOP3BO95985 862 aaKnown RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms