RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 CPN1P15169 458 aa20.56■□□□□ 0.88
ACTN1-220ENST00000556433 OPRM1P35372 400 aa20.56■□□□□ 0.88
ACTN1-220ENST00000556433 KRT20P35900 424 aa20.56■□□□□ 0.88
ACTN1-220ENST00000556433 CORO7P57737 925 aa20.56■□□□□ 0.88
ACTN1-220ENST00000556433 SRYQ05066 204 aa20.56■□□□□ 0.88
ACTN1-220ENST00000556433 FAM153CQ494X1 144 aa20.56■□□□□ 0.88
ACTN1-220ENST00000556433 FLYWCH1Q4VC44 716 aa20.56■□□□□ 0.88
ACTN1-220ENST00000556433 CT45A2Q5DJT8 189 aa20.56■□□□□ 0.88
ACTN1-220ENST00000556433 SPDYAQ5MJ70 313 aa20.56■□□□□ 0.88
ACTN1-220ENST00000556433 GALNT18Q6P9A2 607 aa20.56■□□□□ 0.88
ACTN1-220ENST00000556433 PLCZ1Q86YW0 608 aa20.56■□□□□ 0.88
ACTN1-220ENST00000556433 TRIM42Q8IWZ5 723 aa20.56■□□□□ 0.88
ACTN1-220ENST00000556433 CCNYL1Q8N7R7 359 aa20.56■□□□□ 0.88
ACTN1-220ENST00000556433 C9orf106Q8NAJ2 232 aa20.56■□□□□ 0.88
ACTN1-220ENST00000556433 KIF18AQ8NI77 898 aa20.56■□□□□ 0.88
ACTN1-220ENST00000556433 SLC35A4Q96G79 324 aa20.56■□□□□ 0.88
ACTN1-220ENST00000556433 VSTM2LQ96N03 204 aa20.56■□□□□ 0.88
ACTN1-220ENST00000556433 OR2B2Q9GZK3 357 aa20.56■□□□□ 0.88
ACTN1-220ENST00000556433 CLEC4MQ9H2X3 399 aaPredicted RBP20.56■□□□□ 0.88
ACTN1-220ENST00000556433 GSTO2Q9H4Y5 243 aa20.56■□□□□ 0.88
ACTN1-220ENST00000556433 MID1IP1Q9NPA3 183 aa20.56■□□□□ 0.88
ACTN1-220ENST00000556433 PSMC3IPQ9P2W1 217 aaPredicted RBP20.56■□□□□ 0.88
ACTN1-220ENST00000556433 TBK1Q9UHD2 729 aa20.56■□□□□ 0.88
ACTN1-220ENST00000556433 DCDC2Q9UHG0 476 aa20.56■□□□□ 0.88
ACTN1-220ENST00000556433 C2CD3Q4AC94 2353 aa20.56■□□□□ 0.88
ACTN1-220ENST00000556433 ANKHD1Q8IWZ3 2542 aaKnown RBP20.55■□□□□ 0.88
ACTN1-220ENST00000556433 FAM221AA4D161 298 aa20.55■□□□□ 0.88
ACTN1-220ENST00000556433 KIF2AO00139 706 aaPredicted RBP20.55■□□□□ 0.88
ACTN1-220ENST00000556433 TSPAN2O60636 221 aa20.55■□□□□ 0.88
ACTN1-220ENST00000556433 ERN1O75460 977 aaKnown RBP20.55■□□□□ 0.88
ACTN1-220ENST00000556433 ANXA4P09525 319 aaPredicted RBP20.55■□□□□ 0.88
ACTN1-220ENST00000556433 MPIP34949 423 aa20.55■□□□□ 0.88
ACTN1-220ENST00000556433 SLCO1A2P46721 670 aa20.55■□□□□ 0.88
ACTN1-220ENST00000556433 EFR3AQ14156 821 aa20.55■□□□□ 0.88
ACTN1-220ENST00000556433 ENPP6Q6UWR7 440 aa20.55■□□□□ 0.88
ACTN1-220ENST00000556433 LARP4Q71RC2 724 aaKnown RBP eCLIP20.55■□□□□ 0.88
ACTN1-220ENST00000556433 FAM9CQ8IZT9 166 aa20.55■□□□□ 0.88
ACTN1-220ENST00000556433 C11orf24Q96F05 449 aaPredicted RBP20.55■□□□□ 0.88
ACTN1-220ENST00000556433 BBS4Q96RK4 519 aa20.55■□□□□ 0.88
ACTN1-220ENST00000556433 TUBA1CQ9BQE3 449 aa20.55■□□□□ 0.88
ACTN1-220ENST00000556433 FOLH1BQ9HBA9 442 aa20.55■□□□□ 0.88
ACTN1-220ENST00000556433 TAS2R10Q9NYW0 307 aa20.55■□□□□ 0.88
ACTN1-220ENST00000556433 SENP1Q9P0U3 644 aa20.55■□□□□ 0.88
ACTN1-220ENST00000556433 SERTM1A2A2V5 107 aa20.54■□□□□ 0.88
ACTN1-220ENST00000556433 A6NNC1 897 aa20.54■□□□□ 0.88
ACTN1-220ENST00000556433 EEF1E1-BLOC1S5C9J1V9 151 aa20.54■□□□□ 0.88
ACTN1-220ENST00000556433 H0Y3Z8 333 aa20.54■□□□□ 0.88
ACTN1-220ENST00000556433 EEF1E1O43324 174 aaKnown RBP20.54■□□□□ 0.88
ACTN1-220ENST00000556433 PLOD3O60568 738 aa20.54■□□□□ 0.88
ACTN1-220ENST00000556433 IL18BPO95998 194 aa20.54■□□□□ 0.88
ACTN1-220ENST00000556433 TMIGD3P0DMS9 266 aaPredicted RBP20.54■□□□□ 0.88
ACTN1-220ENST00000556433 IL12BP29460 328 aa20.54■□□□□ 0.88
ACTN1-220ENST00000556433 STARP49675 285 aa20.54■□□□□ 0.88
ACTN1-220ENST00000556433 DGKQP52824 942 aa20.54■□□□□ 0.88
ACTN1-220ENST00000556433 C2orf80Q0P641 193 aa20.54■□□□□ 0.88
ACTN1-220ENST00000556433 CEBPEQ15744 281 aa20.54■□□□□ 0.88
ACTN1-220ENST00000556433 OR5M10Q6IEU7 315 aa20.54■□□□□ 0.88
ACTN1-220ENST00000556433 NPSR1Q6W5P4 371 aa20.54■□□□□ 0.88
ACTN1-220ENST00000556433 KIF18BQ86Y91 864 aa20.54■□□□□ 0.88
ACTN1-220ENST00000556433 SLC44A2Q8IWA5 706 aaPredicted RBP20.54■□□□□ 0.88
ACTN1-220ENST00000556433 OR7G2Q8NG99 324 aa20.54■□□□□ 0.88
ACTN1-220ENST00000556433 GOT1L1Q8NHS2 421 aaPredicted RBP20.54■□□□□ 0.88
ACTN1-220ENST00000556433 CDC26Q8NHZ8 85 aa20.54■□□□□ 0.88
ACTN1-220ENST00000556433 RHOXF2Q9BQY4 288 aa20.54■□□□□ 0.88
ACTN1-220ENST00000556433 TXLNGYQ9BZA5 131 aa20.54■□□□□ 0.88
ACTN1-220ENST00000556433 LIME1Q9H400 295 aa20.54■□□□□ 0.88
ACTN1-220ENST00000556433 CCM2LQ9NUG4 571 aaPredicted RBP20.54■□□□□ 0.88
ACTN1-220ENST00000556433 SIRT5Q9NXA8 310 aa20.54■□□□□ 0.88
ACTN1-220ENST00000556433 TAS2R9Q9NYW1 312 aa20.54■□□□□ 0.88
ACTN1-220ENST00000556433 FBXL2Q9UKC9 423 aa20.54■□□□□ 0.88
ACTN1-220ENST00000556433 WIF1Q9Y5W5 379 aa20.54■□□□□ 0.88
ACTN1-220ENST00000556433 KIAA1549Q9HCM3 1950 aa20.54■□□□□ 0.88
ACTN1-220ENST00000556433 MPDZO75970 2070 aa20.54■□□□□ 0.88
ACTN1-220ENST00000556433 A0A1W2PPM1 405 aa20.53■□□□□ 0.88
ACTN1-220ENST00000556433 TUBAL3A6NHL2 446 aa20.53■□□□□ 0.88
ACTN1-220ENST00000556433 UBFD1O14562 309 aaKnown RBP20.53■□□□□ 0.88
ACTN1-220ENST00000556433 DDCP20711 480 aa20.53■□□□□ 0.88
ACTN1-220ENST00000556433 TACR1P25103 407 aa20.53■□□□□ 0.88
ACTN1-220ENST00000556433 SRD5A2P31213 254 aa20.53■□□□□ 0.88
ACTN1-220ENST00000556433 GSTM5P46439 218 aa20.53■□□□□ 0.88
ACTN1-220ENST00000556433 PNLIPRP2P54317 469 aa20.53■□□□□ 0.88
ACTN1-220ENST00000556433 FOXA1P55317 472 aa20.53■□□□□ 0.88
ACTN1-220ENST00000556433 PSPHP78330 225 aa20.53■□□□□ 0.88
ACTN1-220ENST00000556433 DAZAP2Q15038 168 aaPredicted RBP20.53■□□□□ 0.88
ACTN1-220ENST00000556433 IFNEQ86WN2 208 aa20.53■□□□□ 0.88
ACTN1-220ENST00000556433 CNPY4Q8N129 248 aa20.53■□□□□ 0.88
ACTN1-220ENST00000556433 MZB1Q8WU39 189 aa20.53■□□□□ 0.88
ACTN1-220ENST00000556433 NINJ1Q92982 152 aa20.53■□□□□ 0.88
ACTN1-220ENST00000556433 CCDC126Q96EE4 140 aa20.53■□□□□ 0.88
ACTN1-220ENST00000556433 STMN4Q9H169 189 aaPredicted RBP20.53■□□□□ 0.88
ACTN1-220ENST00000556433 ST6GALNAC2Q9UJ37 374 aa20.53■□□□□ 0.88
ACTN1-220ENST00000556433 EMCNQ9ULC0 261 aa20.53■□□□□ 0.88
ACTN1-220ENST00000556433 CBLCQ9ULV8 474 aa20.53■□□□□ 0.88
ACTN1-220ENST00000556433 OR10H1Q9Y4A9 318 aa20.53■□□□□ 0.88
ACTN1-220ENST00000556433 G3V2L1 256 aa20.52■□□□□ 0.88
ACTN1-220ENST00000556433 MYL2P10916 166 aa20.52■□□□□ 0.88
ACTN1-220ENST00000556433 GFRA1P56159 465 aa20.52■□□□□ 0.88
ACTN1-220ENST00000556433 FOXF2Q12947 444 aa20.52■□□□□ 0.88
ACTN1-220ENST00000556433 IMPG1Q17R60 797 aa20.52■□□□□ 0.88
ACTN1-220ENST00000556433 PRSS53Q2L4Q9 553 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms