RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 MASP1P48740 699 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 ANXA11P50995 505 aaKnown RBP4.16□□□□□ -1.74
ATXN3-241ENST00000556374 DAPP51397 102 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 PTTG1IPP53801 180 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 UGT2B15P54855 530 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 CDH12P55289 794 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 SMIM11AP58511 58 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 DCDC1P59894 354 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 COPZ1P61923 177 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 RPP38P78345 283 aaKnown RBP4.16□□□□□ -1.74
ATXN3-241ENST00000556374 VLDLRP98155 873 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 RUNX1T1Q06455 604 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 CDC20Q12834 499 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 LMAN2Q12907 356 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 DNASE1L3Q13609 305 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 TP53BP2Q13625 1128 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 TSTA3Q13630 321 aaPredicted RBP4.16□□□□□ -1.74
ATXN3-241ENST00000556374 SCARB2Q14108 478 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 ZNF169Q14929 603 aaPredicted RBP4.16□□□□□ -1.74
ATXN3-241ENST00000556374 NCF4Q15080 339 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 PDCD1Q15116 288 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 ZNF630Q2M218 657 aaPredicted RBP4.16□□□□□ -1.74
ATXN3-241ENST00000556374 ADPRMQ3LIE5 342 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 IQCCQ4KMZ1 466 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 CARD16Q5EG05 197 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 TOR1AIP1Q5JTV8 583 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 TPRG1LQ5T0D9 272 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 MPP7Q5T2T1 576 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 ATAD3BQ5T9A4 648 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 RSBN1Q5VWQ0 802 aaPredicted RBP4.16□□□□□ -1.74
ATXN3-241ENST00000556374 ZNF544Q6NX49 715 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 ERAP2Q6P179 960 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 TMEM53Q6P2H8 277 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 FAHD1Q6P587 224 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 BRAT1Q6PJG6 821 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 PAGE2Q7Z2X7 111 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 PIWIL3Q7Z3Z3 882 aaKnown RBP4.16□□□□□ -1.74
ATXN3-241ENST00000556374 CAMKMTQ7Z624 323 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 TMEM179BQ7Z7N9 219 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 TMPRSS11BQ86T26 416 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 SLC22A16Q86VW1 577 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 THOC6Q86W42 341 aaKnown RBP4.16□□□□□ -1.74
ATXN3-241ENST00000556374 SYTL1Q8IYJ3 562 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 ENTHD1Q8IYW4 607 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 CPXM2Q8N436 756 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 CPA6Q8N4T0 437 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 DNAJC22Q8N4W6 341 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 NATD1Q8N6N6 113 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 ARL14EPQ8N8R7 260 aaPredicted RBP4.16□□□□□ -1.74
ATXN3-241ENST00000556374 DENND6BQ8NEG7 585 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 OR56A1Q8NGH5 318 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 WDR36Q8NI36 951 aaKnown RBP4.16□□□□□ -1.74
ATXN3-241ENST00000556374 ZNF461Q8TAF7 563 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 SETD6Q8TBK2 473 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 RASSF5Q8WWW0 418 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 HTRA1Q92743 480 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 TANKQ92844 425 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 FKBP10Q96AY3 582 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 SH3KBP1Q96B97 665 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 FCRL1Q96LA6 429 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 ZNF558Q96NG5 402 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 VPS35Q96QK1 796 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 ZNF300Q96RE9 604 aaPredicted RBP4.16□□□□□ -1.74
ATXN3-241ENST00000556374 LYSMD1Q96S90 227 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 YME1L1Q96TA2 773 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 CSF3RQ99062 836 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 NEURL2Q9BR09 285 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 SLC35A5Q9BS91 424 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 ZSCAN5AQ9BUG6 496 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 EFCAB11Q9BUY7 163 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 CCDC32Q9BV29 185 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 BBS2Q9BXC9 721 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 PRRG3Q9BZD7 231 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 ABCG8Q9H221 673 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 DUSP21Q9H596 190 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 ARMC7Q9H6L4 198 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 TRIM45Q9H8W5 580 aaPredicted RBP4.16□□□□□ -1.74
ATXN3-241ENST00000556374 TPT1P8Q9HAU6 139 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 CACYBPQ9HB71 228 aaKnown RBP4.16□□□□□ -1.74
ATXN3-241ENST00000556374 GALNT9Q9HCQ5 603 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 SERHLQ9NQF3 203 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.16□□□□□ -1.74
ATXN3-241ENST00000556374 THSD1Q9NS62 852 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 PLCXD1Q9NUJ7 323 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 DDX28Q9NUL7 540 aaKnown RBP4.16□□□□□ -1.74
ATXN3-241ENST00000556374 ABCB8Q9NUT2 735 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 VNN3Q9NY84 501 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 SPG21Q9NZD8 308 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 EHD3Q9NZN3 535 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 CNOT2Q9NZN8 540 aaKnown RBP4.16□□□□□ -1.74
ATXN3-241ENST00000556374 SH3BP4Q9P0V3 963 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 CFAP97Q9P2B7 532 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 ANKMY1Q9P2S6 941 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 SPASTQ9UBP0 616 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 ZNF221Q9UK13 617 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 UTS2RQ9UKP6 389 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 MKLN1Q9UL63 735 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 NDRG4Q9ULP0 352 aaKnown RBP4.16□□□□□ -1.74
ATXN3-241ENST00000556374 FZD4Q9ULV1 537 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms