RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 NME3Q13232 169 aa2.21□□□□□ -2.06
SCFD1-218ENST00000556256 LTB4RQ15722 352 aa2.21□□□□□ -2.06
SCFD1-218ENST00000556256 CARTPTQ16568 116 aa2.21□□□□□ -2.06
SCFD1-218ENST00000556256 C14orf28Q4W4Y0 310 aa2.21□□□□□ -2.06
SCFD1-218ENST00000556256 TCHHL1Q5QJ38 904 aaPredicted RBP2.21□□□□□ -2.06
SCFD1-218ENST00000556256 SEL1L2Q5TEA6 688 aa2.21□□□□□ -2.06
SCFD1-218ENST00000556256 FAM219BQ5XKK7 198 aa2.21□□□□□ -2.06
SCFD1-218ENST00000556256 LEG1Q6P5S2 330 aa2.21□□□□□ -2.06
SCFD1-218ENST00000556256 RBM43Q6ZSC3 357 aaKnown RBP2.21□□□□□ -2.06
SCFD1-218ENST00000556256 TMEM26Q6ZUK4 368 aa2.21□□□□□ -2.06
SCFD1-218ENST00000556256 GOLGA7Q7Z5G4 137 aa2.21□□□□□ -2.06
SCFD1-218ENST00000556256 LUZP1Q86V48 1076 aa2.21□□□□□ -2.06
SCFD1-218ENST00000556256 PYROXD2Q8N2H3 581 aa2.21□□□□□ -2.06
SCFD1-218ENST00000556256 OR6T1Q8NGN1 323 aa2.21□□□□□ -2.06
SCFD1-218ENST00000556256 CRYGNQ8WXF5 182 aa2.21□□□□□ -2.06
SCFD1-218ENST00000556256 NCLNQ969V3 563 aa2.21□□□□□ -2.06
SCFD1-218ENST00000556256 SLC25A36Q96CQ1 311 aa2.21□□□□□ -2.06
SCFD1-218ENST00000556256 KCNK16Q96T55 309 aa2.21□□□□□ -2.06
SCFD1-218ENST00000556256 FAM173AQ9BQD7 235 aa2.21□□□□□ -2.06
SCFD1-218ENST00000556256 WRAP53Q9BUR4 548 aaKnown RBP2.21□□□□□ -2.06
SCFD1-218ENST00000556256 ZBP1Q9H171 429 aa2.21□□□□□ -2.06
SCFD1-218ENST00000556256 ADGRL4Q9HBW9 690 aa2.21□□□□□ -2.06
SCFD1-218ENST00000556256 ABCC13Q9NSE7 274 aa2.21□□□□□ -2.06
SCFD1-218ENST00000556256 CENPMQ9NSP4 180 aa2.21□□□□□ -2.06
SCFD1-218ENST00000556256 SOHLH2Q9NX45 425 aa2.21□□□□□ -2.06
SCFD1-218ENST00000556256 TAS2R16Q9NYV7 291 aa2.21□□□□□ -2.06
SCFD1-218ENST00000556256 SEC14L4Q9UDX3 406 aa2.21□□□□□ -2.06
SCFD1-218ENST00000556256 ODF2LQ9ULJ1 636 aa2.21□□□□□ -2.06
SCFD1-218ENST00000556256 ZNF490Q9ULM2 529 aaPredicted RBP2.21□□□□□ -2.06
SCFD1-218ENST00000556256 PLA2G4CQ9UP65 541 aa2.21□□□□□ -2.06
SCFD1-218ENST00000556256 RNF24Q9Y225 148 aa2.21□□□□□ -2.06
SCFD1-218ENST00000556256 NAALAD2Q9Y3Q0 740 aa2.21□□□□□ -2.06
SCFD1-218ENST00000556256 RNF115Q9Y4L5 304 aa2.21□□□□□ -2.06
SCFD1-218ENST00000556256 CLCA3PQ9Y6N3 262 aa2.21□□□□□ -2.06
SCFD1-218ENST00000556256 RALGAPA1Q6GYQ0 2036 aa2.2□□□□□ -2.06
SCFD1-218ENST00000556256 BICDL2A1A5D9 508 aa2.2□□□□□ -2.06
SCFD1-218ENST00000556256 IMPA2O14732 288 aa2.2□□□□□ -2.06
SCFD1-218ENST00000556256 RASGRF2O14827 1237 aa2.2□□□□□ -2.06
SCFD1-218ENST00000556256 SH3BGRLO75368 114 aa2.2□□□□□ -2.06
SCFD1-218ENST00000556256 PDE5AO76074 875 aa2.2□□□□□ -2.06
SCFD1-218ENST00000556256 KBTBD11O94819 623 aa2.2□□□□□ -2.06
SCFD1-218ENST00000556256 PTBP3O95758 552 aaKnown RBP2.2□□□□□ -2.06
SCFD1-218ENST00000556256 GOT2P00505 430 aaKnown RBP2.2□□□□□ -2.06
SCFD1-218ENST00000556256 SNRPCP09234 159 aaKnown RBP2.2□□□□□ -2.06
SCFD1-218ENST00000556256 FAM200BP0CF97 657 aa2.2□□□□□ -2.06
SCFD1-218ENST00000556256 RALAP11233 206 aa2.2□□□□□ -2.06
SCFD1-218ENST00000556256 CALML3P27482 149 aa2.2□□□□□ -2.06
SCFD1-218ENST00000556256 PPP2R1BP30154 601 aa2.2□□□□□ -2.06
SCFD1-218ENST00000556256 CD86P42081 329 aa2.2□□□□□ -2.06
SCFD1-218ENST00000556256 ASMTP46597 345 aa2.2□□□□□ -2.06
SCFD1-218ENST00000556256 CAMLGP49069 296 aa2.2□□□□□ -2.06
SCFD1-218ENST00000556256 MFAP2P55001 183 aa2.2□□□□□ -2.06
SCFD1-218ENST00000556256 SLC26A5P58743 744 aa2.2□□□□□ -2.06
SCFD1-218ENST00000556256 GABPB1Q06547 395 aaPredicted RBP2.2□□□□□ -2.06
SCFD1-218ENST00000556256 SPP2Q13103 211 aa2.2□□□□□ -2.06
SCFD1-218ENST00000556256 SMC1AQ14683 1233 aaKnown RBP2.2□□□□□ -2.06
SCFD1-218ENST00000556256 ACER2Q5QJU3 275 aa2.2□□□□□ -2.06
SCFD1-218ENST00000556256 ABRAXAS1Q6UWZ7 409 aa2.2□□□□□ -2.06
SCFD1-218ENST00000556256 SYVN1Q86TM6 617 aa2.2□□□□□ -2.06
SCFD1-218ENST00000556256 ZSCAN30Q86W11 494 aa2.2□□□□□ -2.06
SCFD1-218ENST00000556256 HSCBQ8IWL3 235 aa2.2□□□□□ -2.06
SCFD1-218ENST00000556256 CCDC36Q8IYA8 594 aa2.2□□□□□ -2.06
SCFD1-218ENST00000556256 ARFGAP2Q8N6H7 521 aa2.2□□□□□ -2.06
SCFD1-218ENST00000556256 OR4F17Q8NGA8 305 aa2.2□□□□□ -2.06
SCFD1-218ENST00000556256 WDR36Q8NI36 951 aaKnown RBP2.2□□□□□ -2.06
SCFD1-218ENST00000556256 FNDC8Q8TC99 324 aa2.2□□□□□ -2.06
SCFD1-218ENST00000556256 AGAP11Q8TF27 550 aa2.2□□□□□ -2.06
SCFD1-218ENST00000556256 LHX4Q969G2 390 aa2.2□□□□□ -2.06
SCFD1-218ENST00000556256 C11orf24Q96F05 449 aaPredicted RBP2.2□□□□□ -2.06
SCFD1-218ENST00000556256 PHYHIPLQ96FC7 376 aa2.2□□□□□ -2.06
SCFD1-218ENST00000556256 OR4F4Q96R69 305 aa2.2□□□□□ -2.06
SCFD1-218ENST00000556256 RANBP9Q96S59 729 aa2.2□□□□□ -2.06
SCFD1-218ENST00000556256 TRIM9Q9C026 710 aa2.2□□□□□ -2.06
SCFD1-218ENST00000556256 TSPY26PQ9H489 355 aa2.2□□□□□ -2.06
SCFD1-218ENST00000556256 TMEM231Q9H6L2 316 aa2.2□□□□□ -2.06
SCFD1-218ENST00000556256 ALG9Q9H6U8 611 aa2.2□□□□□ -2.06
SCFD1-218ENST00000556256 RCOR3Q9P2K3 495 aaPredicted RBP2.2□□□□□ -2.06
SCFD1-218ENST00000556256 ABCD2Q9UBJ2 740 aa2.2□□□□□ -2.06
SCFD1-218ENST00000556256 BCAP29Q9UHQ4 241 aa2.2□□□□□ -2.06
SCFD1-218ENST00000556256 MTF2Q9Y483 593 aaPredicted RBP2.2□□□□□ -2.06
SCFD1-218ENST00000556256 LRIT2A6NDA9 550 aa2.19□□□□□ -2.06
SCFD1-218ENST00000556256 ZNF487B1APH4 448 aa2.19□□□□□ -2.06
SCFD1-218ENST00000556256 C19orf81C9J6K1 198 aa2.19□□□□□ -2.06
SCFD1-218ENST00000556256 NPIPA2E9PIF3 369 aa2.19□□□□□ -2.06
SCFD1-218ENST00000556256 PDXKO00764 312 aa2.19□□□□□ -2.06
SCFD1-218ENST00000556256 EI24O14681 340 aa2.19□□□□□ -2.06
SCFD1-218ENST00000556256 RANBP6O60518 1105 aaKnown RBP2.19□□□□□ -2.06
SCFD1-218ENST00000556256 ZNF253O75346 499 aa2.19□□□□□ -2.06
SCFD1-218ENST00000556256 IGSF6O95976 241 aa2.19□□□□□ -2.06
SCFD1-218ENST00000556256 HOXC4P09017 264 aaPredicted RBP2.19□□□□□ -2.06
SCFD1-218ENST00000556256 WNT2P09544 360 aa2.19□□□□□ -2.06
SCFD1-218ENST00000556256 CCND2P30279 289 aa2.19□□□□□ -2.06
SCFD1-218ENST00000556256 HSPA1LP34931 641 aa2.19□□□□□ -2.06
SCFD1-218ENST00000556256 POU3F4P49335 361 aa2.19□□□□□ -2.06
SCFD1-218ENST00000556256 ZP4Q12836 540 aa2.19□□□□□ -2.06
SCFD1-218ENST00000556256 BTG3Q14201 252 aaPredicted RBP2.19□□□□□ -2.06
SCFD1-218ENST00000556256 KARSQ15046 597 aaKnown RBP2.19□□□□□ -2.06
SCFD1-218ENST00000556256 CEBPEQ15744 281 aa2.19□□□□□ -2.06
SCFD1-218ENST00000556256 PARP6Q2NL67 630 aa2.19□□□□□ -2.06
SCFD1-218ENST00000556256 CCDC92Q53HC0 331 aaPredicted RBP2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms