RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 TSPAN2O60636 221 aa10.81□□□□□ -0.68
VRK1-204ENST00000555351 SEC22BO75396 215 aa10.81□□□□□ -0.68
VRK1-204ENST00000555351 LRATO95237 230 aa10.81□□□□□ -0.68
VRK1-204ENST00000555351 SLU7O95391 586 aaKnown RBP10.81□□□□□ -0.68
VRK1-204ENST00000555351 PSMG1O95456 288 aa10.81□□□□□ -0.68
VRK1-204ENST00000555351 DDX5P17844 614 aaKnown RBP10.81□□□□□ -0.68
VRK1-204ENST00000555351 GCKP35557 465 aa10.81□□□□□ -0.68
VRK1-204ENST00000555351 TIMP3P35625 211 aa10.81□□□□□ -0.68
VRK1-204ENST00000555351 KRT20P35900 424 aa10.81□□□□□ -0.68
VRK1-204ENST00000555351 PEX19P40855 299 aa10.81□□□□□ -0.68
VRK1-204ENST00000555351 PTGDSP41222 190 aa10.81□□□□□ -0.68
VRK1-204ENST00000555351 IFFO1Q0D2I5 559 aa10.81□□□□□ -0.68
VRK1-204ENST00000555351 HSPB2Q16082 182 aa10.81□□□□□ -0.68
VRK1-204ENST00000555351 KANK2Q63ZY3 851 aa10.81□□□□□ -0.68
VRK1-204ENST00000555351 BICRALQ6AI39 1079 aa10.81□□□□□ -0.68
VRK1-204ENST00000555351 FAM180BQ6P0A1 224 aa10.81□□□□□ -0.68
VRK1-204ENST00000555351 ANGPTL8Q6UXH0 198 aa10.81□□□□□ -0.68
VRK1-204ENST00000555351 LURAP1LQ8IV03 231 aa10.81□□□□□ -0.68
VRK1-204ENST00000555351 LACC1Q8IV20 430 aa10.81□□□□□ -0.68
VRK1-204ENST00000555351 CLYBLQ8N0X4 340 aa10.81□□□□□ -0.68
VRK1-204ENST00000555351 OR2L13Q8N349 312 aa10.81□□□□□ -0.68
VRK1-204ENST00000555351 MREGQ8N565 214 aa10.81□□□□□ -0.68
VRK1-204ENST00000555351 OR7G2Q8NG99 324 aa10.81□□□□□ -0.68
VRK1-204ENST00000555351 KAT2AQ92830 837 aa10.81□□□□□ -0.68
VRK1-204ENST00000555351 TMBIM1Q969X1 311 aa10.81□□□□□ -0.68
VRK1-204ENST00000555351 MTERF3Q96E29 417 aa10.81□□□□□ -0.68
VRK1-204ENST00000555351 AMDHD1Q96NU7 426 aa10.81□□□□□ -0.68
VRK1-204ENST00000555351 NODALQ96S42 347 aa10.81□□□□□ -0.68
VRK1-204ENST00000555351 LRTM1Q9HBL6 345 aa10.81□□□□□ -0.68
VRK1-204ENST00000555351 HHATLQ9HCP6 504 aa10.81□□□□□ -0.68
VRK1-204ENST00000555351 TNFRSF12AQ9NP84 129 aa10.81□□□□□ -0.68
VRK1-204ENST00000555351 KLRF1Q9NZS2 232 aa10.81□□□□□ -0.68
VRK1-204ENST00000555351 ABCA12Q86UK0 2595 aa10.81□□□□□ -0.68
VRK1-204ENST00000555351 MYO9AB2RTY4 2548 aa10.8□□□□□ -0.68
VRK1-204ENST00000555351 A0A0G2JNJ9 132 aa10.8□□□□□ -0.68
VRK1-204ENST00000555351 CD8B2A6NJW9 211 aa10.8□□□□□ -0.68
VRK1-204ENST00000555351 REM1O75628 298 aa10.8□□□□□ -0.68
VRK1-204ENST00000555351 TRAPPC6AO75865 159 aa10.8□□□□□ -0.68
VRK1-204ENST00000555351 TUBBP07437 444 aa10.8□□□□□ -0.68
VRK1-204ENST00000555351 CPN1P15169 458 aa10.8□□□□□ -0.68
VRK1-204ENST00000555351 IL12BP29460 328 aa10.8□□□□□ -0.68
VRK1-204ENST00000555351 CEACAM8P31997 349 aaPredicted RBP10.8□□□□□ -0.68
VRK1-204ENST00000555351 ASMTP46597 345 aa10.8□□□□□ -0.68
VRK1-204ENST00000555351 TRPC1P48995 793 aa10.8□□□□□ -0.68
VRK1-204ENST00000555351 NCBP2P52298 156 aaKnown RBP eCLIP10.8□□□□□ -0.68
VRK1-204ENST00000555351 PSG6Q00889 435 aa10.8□□□□□ -0.68
VRK1-204ENST00000555351 NNATQ16517 81 aa10.8□□□□□ -0.68
VRK1-204ENST00000555351 ACSF3Q4G176 576 aaPredicted RBP10.8□□□□□ -0.68
VRK1-204ENST00000555351 FAM219BQ5XKK7 198 aa10.8□□□□□ -0.68
VRK1-204ENST00000555351 CLEC6AQ6EIG7 209 aa10.8□□□□□ -0.68
VRK1-204ENST00000555351 MEX3BQ6ZN04 569 aaKnown RBP10.8□□□□□ -0.68
VRK1-204ENST00000555351 Q6ZSR9 355 aa10.8□□□□□ -0.68
VRK1-204ENST00000555351 PLCZ1Q86YW0 608 aa10.8□□□□□ -0.68
VRK1-204ENST00000555351 CCDC71Q8IV32 467 aaPredicted RBP10.8□□□□□ -0.68
VRK1-204ENST00000555351 DMRTC2Q8IXT2 367 aaPredicted RBP10.8□□□□□ -0.68
VRK1-204ENST00000555351 SRRM1Q8IYB3 904 aaKnown RBP10.8□□□□□ -0.68
VRK1-204ENST00000555351 OR10Q1Q8NGQ4 319 aa10.8□□□□□ -0.68
VRK1-204ENST00000555351 OR2W6PQ8NHA6 318 aa10.8□□□□□ -0.68
VRK1-204ENST00000555351 ZPLD1Q8TCW7 415 aa10.8□□□□□ -0.68
VRK1-204ENST00000555351 ELP4Q96EB1 424 aa10.8□□□□□ -0.68
VRK1-204ENST00000555351 OR2B2Q9GZK3 357 aa10.8□□□□□ -0.68
VRK1-204ENST00000555351 C12orf65Q9H3J6 166 aaKnown RBP10.8□□□□□ -0.68
VRK1-204ENST00000555351 CALHM2Q9HA72 323 aa10.8□□□□□ -0.68
VRK1-204ENST00000555351 NPDC1Q9NQX5 325 aaPredicted RBP10.8□□□□□ -0.68
VRK1-204ENST00000555351 NTMQ9P121 344 aa10.8□□□□□ -0.68
VRK1-204ENST00000555351 ZNF629Q9UEG4 869 aaPredicted RBP10.8□□□□□ -0.68
VRK1-204ENST00000555351 Q9UFV3 132 aa10.8□□□□□ -0.68
VRK1-204ENST00000555351 KCNN3Q9UGI6 736 aa10.8□□□□□ -0.68
VRK1-204ENST00000555351 MRTO4Q9UKD2 239 aaKnown RBP10.8□□□□□ -0.68
VRK1-204ENST00000555351 ABCG2Q9UNQ0 655 aa10.8□□□□□ -0.68
VRK1-204ENST00000555351 POLR3HQ9Y535 204 aaPredicted RBP10.8□□□□□ -0.68
VRK1-204ENST00000555351 DNAJC15Q9Y5T4 150 aa10.8□□□□□ -0.68
VRK1-204ENST00000555351 WIF1Q9Y5W5 379 aa10.8□□□□□ -0.68
VRK1-204ENST00000555351 HCFC1P51610 2035 aa10.8□□□□□ -0.68
VRK1-204ENST00000555351 NINQ8N4C6 2090 aa10.8□□□□□ -0.68
VRK1-204ENST00000555351 ARHGAP21Q5T5U3 1957 aa10.79□□□□□ -0.68
VRK1-204ENST00000555351 UPK1AO00322 258 aa10.79□□□□□ -0.68
VRK1-204ENST00000555351 GNB5O14775 395 aa10.79□□□□□ -0.68
VRK1-204ENST00000555351 LSM1O15116 133 aaKnown RBP10.79□□□□□ -0.68
VRK1-204ENST00000555351 JUNP05412 331 aaKnown RBP10.79□□□□□ -0.68
VRK1-204ENST00000555351 BMP7P18075 431 aa10.79□□□□□ -0.68
VRK1-204ENST00000555351 ALDH3A1P30838 453 aa10.79□□□□□ -0.68
VRK1-204ENST00000555351 SRD5A2P31213 254 aa10.79□□□□□ -0.68
VRK1-204ENST00000555351 RPL3P39023 403 aaKnown RBP10.79□□□□□ -0.68
VRK1-204ENST00000555351 ADH7P40394 386 aa10.79□□□□□ -0.68
VRK1-204ENST00000555351 FRKP42685 505 aaPredicted RBP10.79□□□□□ -0.68
VRK1-204ENST00000555351 PSMD4P55036 377 aaKnown RBP10.79□□□□□ -0.68
VRK1-204ENST00000555351 CORO7P57737 925 aa10.79□□□□□ -0.68
VRK1-204ENST00000555351 PDE7AQ13946 482 aa10.79□□□□□ -0.68
VRK1-204ENST00000555351 ZNHIT3Q15649 155 aaPredicted RBP10.79□□□□□ -0.68
VRK1-204ENST00000555351 UGT3A2Q3SY77 523 aa10.79□□□□□ -0.68
VRK1-204ENST00000555351 FBXL19-AS1Q494R0 122 aa10.79□□□□□ -0.68
VRK1-204ENST00000555351 NSUN5P2Q63ZY6 315 aa10.79□□□□□ -0.68
VRK1-204ENST00000555351 LRIG3Q6UXM1 1119 aa10.79□□□□□ -0.68
VRK1-204ENST00000555351 NPSR1Q6W5P4 371 aa10.79□□□□□ -0.68
VRK1-204ENST00000555351 LARP4Q71RC2 724 aaKnown RBP eCLIP10.79□□□□□ -0.68
VRK1-204ENST00000555351 SLC44A2Q8IWA5 706 aaPredicted RBP10.79□□□□□ -0.68
VRK1-204ENST00000555351 WDSUB1Q8N9V3 476 aa10.79□□□□□ -0.68
VRK1-204ENST00000555351 FAM83FQ8NEG4 500 aaPredicted RBP10.79□□□□□ -0.68
VRK1-204ENST00000555351 OR6Y1Q8NGX8 325 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms