RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 OR2L13Q8N349 312 aa11.12□□□□□ -0.63
SRP54-206ENST00000555317 OR7A2PQ8NGA2 310 aa11.12□□□□□ -0.63
SRP54-206ENST00000555317 CEP70Q8NHQ1 597 aa11.12□□□□□ -0.63
SRP54-206ENST00000555317 SPPL2AQ8TCT8 520 aa11.12□□□□□ -0.63
SRP54-206ENST00000555317 LRRC8CQ8TDW0 803 aa11.12□□□□□ -0.63
SRP54-206ENST00000555317 TMBIM1Q969X1 311 aa11.12□□□□□ -0.63
SRP54-206ENST00000555317 TMCO6Q96DC7 493 aa11.12□□□□□ -0.63
SRP54-206ENST00000555317 DTNBP1Q96EV8 351 aa11.12□□□□□ -0.63
SRP54-206ENST00000555317 RILPQ96NA2 401 aa11.12□□□□□ -0.63
SRP54-206ENST00000555317 DEFB127Q9H1M4 99 aa11.12□□□□□ -0.63
SRP54-206ENST00000555317 LDAHQ9H6V9 325 aa11.12□□□□□ -0.63
SRP54-206ENST00000555317 MEAF6Q9HAF1 191 aa11.12□□□□□ -0.63
SRP54-206ENST00000555317 Q9N2J8 555 aa11.12□□□□□ -0.63
SRP54-206ENST00000555317 ZFP64Q9NPA5 681 aa11.12□□□□□ -0.63
SRP54-206ENST00000555317 EQTNQ9NQ60 294 aa11.12□□□□□ -0.63
SRP54-206ENST00000555317 ASIC5Q9NY37 505 aa11.12□□□□□ -0.63
SRP54-206ENST00000555317 ATP6V1HQ9UI12 483 aa11.12□□□□□ -0.63
SRP54-206ENST00000555317 ERRFI1Q9UJM3 462 aaPredicted RBP11.12□□□□□ -0.63
SRP54-206ENST00000555317 CNOT11Q9UKZ1 510 aaKnown RBP11.12□□□□□ -0.63
SRP54-206ENST00000555317 SNX8Q9Y5X2 465 aa11.12□□□□□ -0.63
SRP54-206ENST00000555317 CENPEQ02224 2701 aa11.12□□□□□ -0.63
SRP54-206ENST00000555317 A0A1W2PRB8 838 aa11.11□□□□□ -0.63
SRP54-206ENST00000555317 CLEC18AA5D8T8 446 aa11.11□□□□□ -0.63
SRP54-206ENST00000555317 ANKRD33BA6NCL7 494 aa11.11□□□□□ -0.63
SRP54-206ENST00000555317 OR6C70A6NIJ9 312 aa11.11□□□□□ -0.63
SRP54-206ENST00000555317 UPK1AO00322 258 aa11.11□□□□□ -0.63
SRP54-206ENST00000555317 CCL21O00585 134 aa11.11□□□□□ -0.63
SRP54-206ENST00000555317 HDAC3O15379 428 aa11.11□□□□□ -0.63
SRP54-206ENST00000555317 CFLARO15519 480 aa11.11□□□□□ -0.63
SRP54-206ENST00000555317 GLSO94925 669 aaPredicted RBP11.11□□□□□ -0.63
SRP54-206ENST00000555317 LAMP1P11279 417 aa11.11□□□□□ -0.63
SRP54-206ENST00000555317 EFNA1P20827 205 aaPredicted RBP11.11□□□□□ -0.63
SRP54-206ENST00000555317 GDF1P27539 372 aa11.11□□□□□ -0.63
SRP54-206ENST00000555317 PTGS2P35354 604 aa11.11□□□□□ -0.63
SRP54-206ENST00000555317 MAGEA5P43359 124 aa11.11□□□□□ -0.63
SRP54-206ENST00000555317 PSMD4P55036 377 aaKnown RBP11.11□□□□□ -0.63
SRP54-206ENST00000555317 HSF1Q00613 529 aa11.11□□□□□ -0.63
SRP54-206ENST00000555317 TOMM20Q15388 145 aa11.11□□□□□ -0.63
SRP54-206ENST00000555317 DECR1Q16698 335 aa11.11□□□□□ -0.63
SRP54-206ENST00000555317 PGS1Q32NB8 556 aa11.11□□□□□ -0.63
SRP54-206ENST00000555317 TTMPQ5BVD1 217 aa11.11□□□□□ -0.63
SRP54-206ENST00000555317 CMPK2Q5EBM0 449 aa11.11□□□□□ -0.63
SRP54-206ENST00000555317 NXNQ6DKJ4 435 aa11.11□□□□□ -0.63
SRP54-206ENST00000555317 CLEC18BQ6UXF7 455 aa11.11□□□□□ -0.63
SRP54-206ENST00000555317 SPPL2CQ8IUH8 684 aa11.11□□□□□ -0.63
SRP54-206ENST00000555317 LRRC34Q8IZ02 419 aa11.11□□□□□ -0.63
SRP54-206ENST00000555317 KRTCAP2Q8N6L1 136 aa11.11□□□□□ -0.63
SRP54-206ENST00000555317 CLEC18CQ8NCF0 446 aa11.11□□□□□ -0.63
SRP54-206ENST00000555317 OR52N2Q8NGI0 321 aa11.11□□□□□ -0.63
SRP54-206ENST00000555317 JADE3Q92613 823 aa11.11□□□□□ -0.63
SRP54-206ENST00000555317 CHMP6Q96FZ7 201 aa11.11□□□□□ -0.63
SRP54-206ENST00000555317 MS4A4EQ96PG1 132 aa11.11□□□□□ -0.63
SRP54-206ENST00000555317 ADOQ96SZ5 270 aa11.11□□□□□ -0.63
SRP54-206ENST00000555317 SH3GL2Q99962 352 aa11.11□□□□□ -0.63
SRP54-206ENST00000555317 OSBPL11Q9BXB4 747 aa11.11□□□□□ -0.63
SRP54-206ENST00000555317 DPY30Q9C005 99 aa11.11□□□□□ -0.63
SRP54-206ENST00000555317 FREM3P0C091 2139 aa11.11□□□□□ -0.63
SRP54-206ENST00000555317 A0A1B0GTH9 108 aa11.1□□□□□ -0.63
SRP54-206ENST00000555317 PRAMEF25A6NGN4 478 aa11.1□□□□□ -0.63
SRP54-206ENST00000555317 KLF11O14901 512 aa11.1□□□□□ -0.63
SRP54-206ENST00000555317 EMC8O43402 210 aa11.1□□□□□ -0.63
SRP54-206ENST00000555317 UGT2B11O75310 529 aa11.1□□□□□ -0.63
SRP54-206ENST00000555317 NME6O75414 186 aaPredicted RBP11.1□□□□□ -0.63
SRP54-206ENST00000555317 KCNH1O95259 989 aa11.1□□□□□ -0.63
SRP54-206ENST00000555317 TPOP07202 933 aa11.1□□□□□ -0.63
SRP54-206ENST00000555317 CT45A8P0DMV1 189 aa11.1□□□□□ -0.63
SRP54-206ENST00000555317 CT45A9P0DMV2 189 aa11.1□□□□□ -0.63
SRP54-206ENST00000555317 SOX18P35713 384 aa11.1□□□□□ -0.63
SRP54-206ENST00000555317 CA7P43166 264 aa11.1□□□□□ -0.63
SRP54-206ENST00000555317 RFX3P48380 749 aa11.1□□□□□ -0.63
SRP54-206ENST00000555317 CDK9P50750 372 aaKnown RBP11.1□□□□□ -0.63
SRP54-206ENST00000555317 CLNS1AP54105 237 aaKnown RBP11.1□□□□□ -0.63
SRP54-206ENST00000555317 CLDN8P56748 225 aa11.1□□□□□ -0.63
SRP54-206ENST00000555317 SRSF1Q07955 248 aaKnown RBP eCLIP11.1□□□□□ -0.63
SRP54-206ENST00000555317 FOXO1Q12778 655 aa11.1□□□□□ -0.63
SRP54-206ENST00000555317 SNTA1Q13424 505 aa11.1□□□□□ -0.63
SRP54-206ENST00000555317 SLC10A1Q14973 349 aa11.1□□□□□ -0.63
SRP54-206ENST00000555317 MLC1Q15049 377 aa11.1□□□□□ -0.63
SRP54-206ENST00000555317 HYAL4Q2M3T9 481 aa11.1□□□□□ -0.63
SRP54-206ENST00000555317 CYP27C1Q4G0S4 372 aa11.1□□□□□ -0.63
SRP54-206ENST00000555317 CT45A2Q5DJT8 189 aa11.1□□□□□ -0.63
SRP54-206ENST00000555317 BICRALQ6AI39 1079 aa11.1□□□□□ -0.63
SRP54-206ENST00000555317 SLC30A6Q6NXT4 461 aa11.1□□□□□ -0.63
SRP54-206ENST00000555317 NPSR1Q6W5P4 371 aa11.1□□□□□ -0.63
SRP54-206ENST00000555317 TMEM251Q8N6I4 163 aa11.1□□□□□ -0.63
SRP54-206ENST00000555317 CDRT4Q8N9R6 151 aa11.1□□□□□ -0.63
SRP54-206ENST00000555317 VPS37AQ8NEZ2 397 aa11.1□□□□□ -0.63
SRP54-206ENST00000555317 NUP43Q8NFH3 380 aa11.1□□□□□ -0.63
SRP54-206ENST00000555317 GPR151Q8TDV0 419 aa11.1□□□□□ -0.63
SRP54-206ENST00000555317 ZNF75CPQ92670 426 aaPredicted RBP11.1□□□□□ -0.63
SRP54-206ENST00000555317 EFHD2Q96C19 240 aaPredicted RBP11.1□□□□□ -0.63
SRP54-206ENST00000555317 DUSP26Q9BV47 211 aa11.1□□□□□ -0.63
SRP54-206ENST00000555317 ANGPTL4Q9BY76 406 aa11.1□□□□□ -0.63
SRP54-206ENST00000555317 BHLHE41Q9C0J9 482 aaPredicted RBP11.1□□□□□ -0.63
SRP54-206ENST00000555317 ZNF703Q9H7S9 590 aaPredicted RBP11.1□□□□□ -0.63
SRP54-206ENST00000555317 ZDHHC11Q9H8X9 412 aa11.1□□□□□ -0.63
SRP54-206ENST00000555317 NEUROD4Q9HD90 331 aa11.1□□□□□ -0.63
SRP54-206ENST00000555317 ZCCHC3Q9NUD5 404 aaKnown RBP11.1□□□□□ -0.63
SRP54-206ENST00000555317 TINAGQ9UJW2 476 aa11.1□□□□□ -0.63
SRP54-206ENST00000555317 CBLCQ9ULV8 474 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms