RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 FAM114A2Q9NRY5 505 aa4.3□□□□□ -1.72
CKS1BP1-201ENST00000555221 ZNF446Q9NWS9 450 aa4.3□□□□□ -1.72
CKS1BP1-201ENST00000555221 RAI14Q9P0K7 980 aa4.3□□□□□ -1.72
CKS1BP1-201ENST00000555221 SENP1Q9P0U3 644 aa4.3□□□□□ -1.72
CKS1BP1-201ENST00000555221 ATP6V1HQ9UI12 483 aa4.3□□□□□ -1.72
CKS1BP1-201ENST00000555221 FOXJ3Q9UPW0 622 aa4.3□□□□□ -1.72
CKS1BP1-201ENST00000555221 RNF24Q9Y225 148 aa4.3□□□□□ -1.72
CKS1BP1-201ENST00000555221 KLF2Q9Y5W3 355 aaPredicted RBP4.3□□□□□ -1.72
CKS1BP1-201ENST00000555221 STYXL1Q9Y6J8 313 aa4.3□□□□□ -1.72
CKS1BP1-201ENST00000555221 PCNX3Q9H6A9 2034 aa4.29□□□□□ -1.72
CKS1BP1-201ENST00000555221 IGHV3OR16-12A0A075B7B8 117 aa4.29□□□□□ -1.72
CKS1BP1-201ENST00000555221 A0A087WZY1 265 aa4.29□□□□□ -1.72
CKS1BP1-201ENST00000555221 RNF222A6NCQ9 220 aa4.29□□□□□ -1.72
CKS1BP1-201ENST00000555221 TRABD2BA6NFA1 517 aa4.29□□□□□ -1.72
CKS1BP1-201ENST00000555221 C11orf98E9PRG8 122 aa4.29□□□□□ -1.72
CKS1BP1-201ENST00000555221 H3BMH7 237 aa4.29□□□□□ -1.72
CKS1BP1-201ENST00000555221 E2F3O00716 465 aa4.29□□□□□ -1.72
CKS1BP1-201ENST00000555221 TYROBPO43914 113 aa4.29□□□□□ -1.72
CKS1BP1-201ENST00000555221 APBB3O95704 486 aa4.29□□□□□ -1.72
CKS1BP1-201ENST00000555221 MELTFP08582 738 aa4.29□□□□□ -1.72
CKS1BP1-201ENST00000555221 ANXA4P09525 319 aaPredicted RBP4.29□□□□□ -1.72
CKS1BP1-201ENST00000555221 TNNI3P19429 210 aa4.29□□□□□ -1.72
CKS1BP1-201ENST00000555221 AXLP30530 894 aa4.29□□□□□ -1.72
CKS1BP1-201ENST00000555221 ELK3P41970 407 aa4.29□□□□□ -1.72
CKS1BP1-201ENST00000555221 SLC8A3P57103 927 aa4.29□□□□□ -1.72
CKS1BP1-201ENST00000555221 ADPRMQ3LIE5 342 aa4.29□□□□□ -1.72
CKS1BP1-201ENST00000555221 NHLRC3Q5JS37 347 aa4.29□□□□□ -1.72
CKS1BP1-201ENST00000555221 LEMD1Q68G75 181 aa4.29□□□□□ -1.72
CKS1BP1-201ENST00000555221 PRR5LQ6MZQ0 368 aa4.29□□□□□ -1.72
CKS1BP1-201ENST00000555221 LRRC8BQ6P9F7 803 aa4.29□□□□□ -1.72
CKS1BP1-201ENST00000555221 ZNF562Q6V9R5 426 aa4.29□□□□□ -1.72
CKS1BP1-201ENST00000555221 ADAMTSL5Q6ZMM2 481 aa4.29□□□□□ -1.72
CKS1BP1-201ENST00000555221 FGFRL1Q8N441 504 aa4.29□□□□□ -1.72
CKS1BP1-201ENST00000555221 CRYGNQ8WXF5 182 aa4.29□□□□□ -1.72
CKS1BP1-201ENST00000555221 DCAF13Q9NV06 445 aaKnown RBP4.29□□□□□ -1.72
CKS1BP1-201ENST00000555221 MRC2Q9UBG0 1479 aa4.29□□□□□ -1.72
CKS1BP1-201ENST00000555221 CACNA1FO60840 1977 aa4.29□□□□□ -1.72
CKS1BP1-201ENST00000555221 TRIM49BA6NDI0 452 aa4.28□□□□□ -1.72
CKS1BP1-201ENST00000555221 ZNF487B1APH4 448 aa4.28□□□□□ -1.72
CKS1BP1-201ENST00000555221 WASH3PC4AMC7 463 aa4.28□□□□□ -1.72
CKS1BP1-201ENST00000555221 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.28□□□□□ -1.72
CKS1BP1-201ENST00000555221 IMPA2O14732 288 aa4.28□□□□□ -1.72
CKS1BP1-201ENST00000555221 NOL3O60936 208 aaKnown RBP4.28□□□□□ -1.72
CKS1BP1-201ENST00000555221 SDC3O75056 442 aa4.28□□□□□ -1.72
CKS1BP1-201ENST00000555221 DIRAS3O95661 229 aa4.28□□□□□ -1.72
CKS1BP1-201ENST00000555221 AK1P00568 194 aa4.28□□□□□ -1.72
CKS1BP1-201ENST00000555221 CA3P07451 260 aa4.28□□□□□ -1.72
CKS1BP1-201ENST00000555221 TSPAN8P19075 237 aa4.28□□□□□ -1.72
CKS1BP1-201ENST00000555221 STK19P49842 368 aaPredicted RBP4.28□□□□□ -1.72
CKS1BP1-201ENST00000555221 NAPAP54920 295 aa4.28□□□□□ -1.72
CKS1BP1-201ENST00000555221 ABRAXAS2Q15018 415 aa4.28□□□□□ -1.72
CKS1BP1-201ENST00000555221 HIGD2BQ4VC39 106 aa4.28□□□□□ -1.72
CKS1BP1-201ENST00000555221 SEL1L2Q5TEA6 688 aa4.28□□□□□ -1.72
CKS1BP1-201ENST00000555221 WASH2PQ6VEQ5 465 aa4.28□□□□□ -1.72
CKS1BP1-201ENST00000555221 CEACAM19Q7Z692 300 aa4.28□□□□□ -1.72
CKS1BP1-201ENST00000555221 ERICH1Q86X53 443 aa4.28□□□□□ -1.72
CKS1BP1-201ENST00000555221 CCDC36Q8IYA8 594 aa4.28□□□□□ -1.72
CKS1BP1-201ENST00000555221 ZBTB44Q8NCP5 570 aa4.28□□□□□ -1.72
CKS1BP1-201ENST00000555221 NFAM1Q8NET5 270 aaPredicted RBP4.28□□□□□ -1.72
CKS1BP1-201ENST00000555221 TBCKQ8TEA7 893 aa4.28□□□□□ -1.72
CKS1BP1-201ENST00000555221 ITLN1Q8WWA0 313 aa4.28□□□□□ -1.72
CKS1BP1-201ENST00000555221 RAB3CQ96E17 227 aa4.28□□□□□ -1.72
CKS1BP1-201ENST00000555221 PUS3Q9BZE2 481 aaKnown RBP4.28□□□□□ -1.72
CKS1BP1-201ENST00000555221 LIN28AQ9H9Z2 209 aaKnown RBP4.28□□□□□ -1.72
CKS1BP1-201ENST00000555221 DUS2Q9NX74 493 aaKnown RBP4.28□□□□□ -1.72
CKS1BP1-201ENST00000555221 CHMP2BQ9UQN3 213 aa4.28□□□□□ -1.72
CKS1BP1-201ENST00000555221 NESP48681 1621 aa4.28□□□□□ -1.72
CKS1BP1-201ENST00000555221 TDRD15B5MCY1 1934 aaKnown RBP4.27□□□□□ -1.73
CKS1BP1-201ENST00000555221 TRBV7-9A0A0J9YWB2 115 aa4.27□□□□□ -1.73
CKS1BP1-201ENST00000555221 A0A0U1RQV5 110 aa4.27□□□□□ -1.73
CKS1BP1-201ENST00000555221 H0YL77 283 aa4.27□□□□□ -1.73
CKS1BP1-201ENST00000555221 K7EPI3 171 aa4.27□□□□□ -1.73
CKS1BP1-201ENST00000555221 CHADO15335 359 aa4.27□□□□□ -1.73
CKS1BP1-201ENST00000555221 LRRTM2O43300 516 aa4.27□□□□□ -1.73
CKS1BP1-201ENST00000555221 HPP00738 406 aa4.27□□□□□ -1.73
CKS1BP1-201ENST00000555221 IFNB1P01574 187 aa4.27□□□□□ -1.73
CKS1BP1-201ENST00000555221 KRT6BP04259 564 aa4.27□□□□□ -1.73
CKS1BP1-201ENST00000555221 HEXBP07686 556 aa4.27□□□□□ -1.73
CKS1BP1-201ENST00000555221 CALCBP10092 127 aa4.27□□□□□ -1.73
CKS1BP1-201ENST00000555221 THRBP10828 461 aa4.27□□□□□ -1.73
CKS1BP1-201ENST00000555221 PAICSP22234 425 aaKnown RBP4.27□□□□□ -1.73
CKS1BP1-201ENST00000555221 CYP2F1P24903 491 aa4.27□□□□□ -1.73
CKS1BP1-201ENST00000555221 MDH1P40925 334 aaKnown RBP4.27□□□□□ -1.73
CKS1BP1-201ENST00000555221 HTR5AP47898 357 aa4.27□□□□□ -1.73
CKS1BP1-201ENST00000555221 KRT6CP48668 564 aa4.27□□□□□ -1.73
CKS1BP1-201ENST00000555221 METAP1P53582 386 aa4.27□□□□□ -1.73
CKS1BP1-201ENST00000555221 EXOSC2Q13868 293 aaKnown RBP4.27□□□□□ -1.73
CKS1BP1-201ENST00000555221 CRMP1Q14194 572 aa4.27□□□□□ -1.73
CKS1BP1-201ENST00000555221 LPCAT2Q7L5N7 544 aa4.27□□□□□ -1.73
CKS1BP1-201ENST00000555221 GCNT2Q8N0V5 402 aa4.27□□□□□ -1.73
CKS1BP1-201ENST00000555221 RSPH1Q8WYR4 309 aa4.27□□□□□ -1.73
CKS1BP1-201ENST00000555221 C9orf85Q96MD7 179 aa4.27□□□□□ -1.73
CKS1BP1-201ENST00000555221 VSTM2LQ96N03 204 aa4.27□□□□□ -1.73
CKS1BP1-201ENST00000555221 GPA33Q99795 319 aa4.27□□□□□ -1.73
CKS1BP1-201ENST00000555221 ZBP1Q9H171 429 aa4.27□□□□□ -1.73
CKS1BP1-201ENST00000555221 COG4Q9H9E3 785 aa4.27□□□□□ -1.73
CKS1BP1-201ENST00000555221 LPAR2Q9HBW0 351 aa4.27□□□□□ -1.73
CKS1BP1-201ENST00000555221 RCOR3Q9P2K3 495 aaPredicted RBP4.27□□□□□ -1.73
CKS1BP1-201ENST00000555221 AP1M2Q9Y6Q5 423 aa4.27□□□□□ -1.73
CKS1BP1-201ENST00000555221 GRIN2DO15399 1336 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms