RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 OR2A14Q96R47 310 aa11.17□□□□□ -0.62
XRCC3-208ENST00000554811 TMEM38AQ9H6F2 299 aa11.17□□□□□ -0.62
XRCC3-208ENST00000554811 C6orf106Q9H6K1 298 aaPredicted RBP11.17□□□□□ -0.62
XRCC3-208ENST00000554811 DDX31Q9H8H2 851 aaKnown RBP11.17□□□□□ -0.62
XRCC3-208ENST00000554811 THSD1Q9NS62 852 aa11.17□□□□□ -0.62
XRCC3-208ENST00000554811 SH3D21A4FU49 640 aa11.17□□□□□ -0.62
XRCC3-208ENST00000554811 FAM47E-STBD1D6RA91 191 aa11.17□□□□□ -0.62
XRCC3-208ENST00000554811 C1QTNF3-AMACRE9PGA6 284 aa11.17□□□□□ -0.62
XRCC3-208ENST00000554811 NARSO43776 548 aaKnown RBP11.17□□□□□ -0.62
XRCC3-208ENST00000554811 B4GALT2O60909 372 aa11.17□□□□□ -0.62
XRCC3-208ENST00000554811 ASGR2P07307 311 aa11.17□□□□□ -0.62
XRCC3-208ENST00000554811 CHRM4P08173 479 aa11.17□□□□□ -0.62
XRCC3-208ENST00000554811 HTR3AP46098 478 aa11.17□□□□□ -0.62
XRCC3-208ENST00000554811 GCGRP47871 477 aa11.17□□□□□ -0.62
XRCC3-208ENST00000554811 OR4C11Q6IEV9 310 aa11.17□□□□□ -0.62
XRCC3-208ENST00000554811 NUP43Q8NFH3 380 aa11.17□□□□□ -0.62
XRCC3-208ENST00000554811 PDXPQ96GD0 296 aa11.17□□□□□ -0.62
XRCC3-208ENST00000554811 MRGPRX3Q96LB0 322 aa11.17□□□□□ -0.62
XRCC3-208ENST00000554811 DPH1Q9BZG8 443 aa11.17□□□□□ -0.62
XRCC3-208ENST00000554811 ZBP1Q9H171 429 aa11.17□□□□□ -0.62
XRCC3-208ENST00000554811 IRF2BPLQ9H1B7 796 aa11.17□□□□□ -0.62
XRCC3-208ENST00000554811 SERHL2Q9H4I8 314 aa11.17□□□□□ -0.62
XRCC3-208ENST00000554811 MBNL1Q9NR56 388 aaKnown RBP11.17□□□□□ -0.62
XRCC3-208ENST00000554811 PLCXD1Q9NUJ7 323 aa11.17□□□□□ -0.62
XRCC3-208ENST00000554811 NDRG2Q9UN36 371 aaKnown RBP11.17□□□□□ -0.62
XRCC3-208ENST00000554811 SPEGQ15772 3267 aa11.17□□□□□ -0.62
XRCC3-208ENST00000554811 J3QLW9 94 aa11.16□□□□□ -0.62
XRCC3-208ENST00000554811 CDC123O75794 336 aaPredicted RBP11.16□□□□□ -0.62
XRCC3-208ENST00000554811 TOXO94900 526 aa11.16□□□□□ -0.62
XRCC3-208ENST00000554811 ZNF19P17023 458 aa11.16□□□□□ -0.62
XRCC3-208ENST00000554811 OPRD1P41143 372 aa11.16□□□□□ -0.62
XRCC3-208ENST00000554811 KHKP50053 298 aa11.16□□□□□ -0.62
XRCC3-208ENST00000554811 WNT4P56705 351 aa11.16□□□□□ -0.62
XRCC3-208ENST00000554811 COX10Q12887 443 aa11.16□□□□□ -0.62
XRCC3-208ENST00000554811 C10orf53Q8N6V4 93 aa11.16□□□□□ -0.62
XRCC3-208ENST00000554811 SIMC1Q8NDZ2 872 aa11.16□□□□□ -0.62
XRCC3-208ENST00000554811 LMLNQ96KR4 655 aa11.16□□□□□ -0.62
XRCC3-208ENST00000554811 IFT27Q9BW83 186 aa11.16□□□□□ -0.62
XRCC3-208ENST00000554811 ANKHQ9HCJ1 492 aa11.16□□□□□ -0.62
XRCC3-208ENST00000554811 EXTL2Q9UBQ6 330 aa11.16□□□□□ -0.62
XRCC3-208ENST00000554811 GPR55Q9Y2T6 319 aaPredicted RBP11.16□□□□□ -0.62
XRCC3-208ENST00000554811 SLC9A3R1O14745 358 aaPredicted RBP11.16□□□□□ -0.62
XRCC3-208ENST00000554811 PRKAR1AP10644 381 aa11.16□□□□□ -0.62
XRCC3-208ENST00000554811 AK4P27144 223 aaPredicted RBP11.16□□□□□ -0.62
XRCC3-208ENST00000554811 KCNJ5P48544 419 aa11.16□□□□□ -0.62
XRCC3-208ENST00000554811 HYAL4Q2M3T9 481 aa11.16□□□□□ -0.62
XRCC3-208ENST00000554811 BTBD16Q32M84 506 aa11.16□□□□□ -0.62
XRCC3-208ENST00000554811 ATCAYQ86WG3 371 aa11.16□□□□□ -0.62
XRCC3-208ENST00000554811 IZUMO1Q8IYV9 350 aa11.16□□□□□ -0.62
XRCC3-208ENST00000554811 SAMD12Q8N8I0 201 aa11.16□□□□□ -0.62
XRCC3-208ENST00000554811 SPRYD4Q8WW59 207 aaPredicted RBP11.16□□□□□ -0.62
XRCC3-208ENST00000554811 NEURL3Q96EH8 262 aa11.16□□□□□ -0.62
XRCC3-208ENST00000554811 GAL3ST1Q99999 423 aa11.16□□□□□ -0.62
XRCC3-208ENST00000554811 MS4A8Q9BY19 250 aa11.16□□□□□ -0.62
XRCC3-208ENST00000554811 TNFRSF10DQ9UBN6 386 aa11.16□□□□□ -0.62
XRCC3-208ENST00000554811 A0A087WUU8 490 aa11.16□□□□□ -0.62
XRCC3-208ENST00000554811 A0A1W2PRG6 482 aa11.16□□□□□ -0.62
XRCC3-208ENST00000554811 FOXE1O00358 373 aaPredicted RBP11.16□□□□□ -0.62
XRCC3-208ENST00000554811 PRG2P13727 222 aa11.16□□□□□ -0.62
XRCC3-208ENST00000554811 CSNK2A2P19784 350 aaPredicted RBP11.16□□□□□ -0.62
XRCC3-208ENST00000554811 NT5EP21589 574 aa11.16□□□□□ -0.62
XRCC3-208ENST00000554811 GRPRP30550 384 aa11.16□□□□□ -0.62
XRCC3-208ENST00000554811 HNRNPFP52597 415 aaKnown RBP11.16□□□□□ -0.62
XRCC3-208ENST00000554811 TATDN3Q17R31 274 aa11.16□□□□□ -0.62
XRCC3-208ENST00000554811 CDC73Q6P1J9 531 aa11.16□□□□□ -0.62
XRCC3-208ENST00000554811 ZNF433Q8N7K0 673 aaPredicted RBP11.16□□□□□ -0.62
XRCC3-208ENST00000554811 BEST4Q8NFU0 473 aa11.16□□□□□ -0.62
XRCC3-208ENST00000554811 LCN9Q8WX39 176 aa11.16□□□□□ -0.62
XRCC3-208ENST00000554811 CXorf40BQ96DE9 158 aa11.16□□□□□ -0.62
XRCC3-208ENST00000554811 INSM2Q96T92 566 aaPredicted RBP11.16□□□□□ -0.62
XRCC3-208ENST00000554811 CTRCQ99895 268 aa11.16□□□□□ -0.62
XRCC3-208ENST00000554811 SPATA5L1Q9BVQ7 753 aa11.16□□□□□ -0.62
XRCC3-208ENST00000554811 CNOT2Q9NZN8 540 aaKnown RBP11.16□□□□□ -0.62
XRCC3-208ENST00000554811 USP36Q9P275 1121 aaKnown RBP11.16□□□□□ -0.62
XRCC3-208ENST00000554811 ABHD14A-ACY1A0A1B0GW23 586 aa11.15□□□□□ -0.62
XRCC3-208ENST00000554811 BTN3A3O00478 584 aa11.15□□□□□ -0.62
XRCC3-208ENST00000554811 PAHP00439 452 aa11.15□□□□□ -0.62
XRCC3-208ENST00000554811 SRPRAP08240 638 aaKnown RBP11.15□□□□□ -0.62
XRCC3-208ENST00000554811 BMP7P18075 431 aa11.15□□□□□ -0.62
XRCC3-208ENST00000554811 CCR4P51679 360 aa11.15□□□□□ -0.62
XRCC3-208ENST00000554811 TAS2R38P59533 333 aa11.15□□□□□ -0.62
XRCC3-208ENST00000554811 PSPHP78330 225 aa11.15□□□□□ -0.62
XRCC3-208ENST00000554811 FABP5Q01469 135 aa11.15□□□□□ -0.62
XRCC3-208ENST00000554811 HYAL2Q12891 473 aa11.15□□□□□ -0.62
XRCC3-208ENST00000554811 ELAVL3Q14576 367 aaKnown RBP11.15□□□□□ -0.62
XRCC3-208ENST00000554811 KLHL22Q53GT1 634 aa11.15□□□□□ -0.62
XRCC3-208ENST00000554811 VASH1Q7L8A9 365 aaPredicted RBP11.15□□□□□ -0.62
XRCC3-208ENST00000554811 CCDC190Q86UF4 302 aa11.15□□□□□ -0.62
XRCC3-208ENST00000554811 PARGQ86W56 976 aa11.15□□□□□ -0.62
XRCC3-208ENST00000554811 ACOT4Q8N9L9 421 aa11.15□□□□□ -0.62
XRCC3-208ENST00000554811 OR2L2Q8NH16 312 aa11.15□□□□□ -0.62
XRCC3-208ENST00000554811 TMEM255BQ8WV15 326 aa11.15□□□□□ -0.62
XRCC3-208ENST00000554811 TM9SF4Q92544 642 aa11.15□□□□□ -0.62
XRCC3-208ENST00000554811 SGPP1Q9BX95 441 aa11.15□□□□□ -0.62
XRCC3-208ENST00000554811 CABIN1Q9Y6J0 2220 aa11.15□□□□□ -0.62
XRCC3-208ENST00000554811 DAPL1A0PJW8 107 aa11.15□□□□□ -0.62
XRCC3-208ENST00000554811 ZNF670-ZNF695F2Z2N8 137 aa11.15□□□□□ -0.62
XRCC3-208ENST00000554811 MEN1O00255 615 aa11.15□□□□□ -0.62
XRCC3-208ENST00000554811 EEF1E1O43324 174 aaKnown RBP11.15□□□□□ -0.62
XRCC3-208ENST00000554811 GABRB1P18505 474 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms