RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 IL17CQ9P0M4 197 aa13.26□□□□□ -0.29
VTI1B-204ENST00000554659 MFSD13AQ14CX5 517 aa13.25□□□□□ -0.29
VTI1B-204ENST00000554659 ZNF529Q6P280 563 aa13.25□□□□□ -0.29
VTI1B-204ENST00000554659 SLC41A3Q96GZ6 507 aa13.25□□□□□ -0.29
VTI1B-204ENST00000554659 ZNF486Q96H40 463 aaPredicted RBP13.25□□□□□ -0.29
VTI1B-204ENST00000554659 NEDD4LQ96PU5 975 aa13.25□□□□□ -0.29
VTI1B-204ENST00000554659 WDR77Q9BQA1 342 aaPredicted RBP13.25□□□□□ -0.29
VTI1B-204ENST00000554659 ZBTB20Q9HC78 741 aaPredicted RBP13.25□□□□□ -0.29
VTI1B-204ENST00000554659 CPED1A4D0V7 1026 aa13.25□□□□□ -0.29
VTI1B-204ENST00000554659 ACTBP60709 375 aa13.25□□□□□ -0.29
VTI1B-204ENST00000554659 ACTG1P63261 375 aa13.25□□□□□ -0.29
VTI1B-204ENST00000554659 FGFBP1Q14512 234 aa13.25□□□□□ -0.29
VTI1B-204ENST00000554659 TMEM173Q86WV6 379 aaPredicted RBP13.25□□□□□ -0.29
VTI1B-204ENST00000554659 POC1BQ8TC44 478 aa13.25□□□□□ -0.29
VTI1B-204ENST00000554659 RHOP08100 348 aa13.25□□□□□ -0.29
VTI1B-204ENST00000554659 RPS2P15880 293 aaKnown RBP13.25□□□□□ -0.29
VTI1B-204ENST00000554659 KCNJ5P48544 419 aa13.25□□□□□ -0.29
VTI1B-204ENST00000554659 RIDAP52758 137 aaKnown RBP13.25□□□□□ -0.29
VTI1B-204ENST00000554659 FAM198BQ6UWH4 519 aa13.25□□□□□ -0.29
VTI1B-204ENST00000554659 NRMQ8IXM6 262 aa13.25□□□□□ -0.29
VTI1B-204ENST00000554659 GATSQ8NAP1 163 aa13.25□□□□□ -0.29
VTI1B-204ENST00000554659 FIBINQ8TAL6 211 aa13.25□□□□□ -0.29
VTI1B-204ENST00000554659 WDR20Q8TBZ3 569 aa13.25□□□□□ -0.29
VTI1B-204ENST00000554659 ACTRT3Q9BYD9 372 aa13.25□□□□□ -0.29
VTI1B-204ENST00000554659 SRA1Q9HD15 236 aaKnown RBP13.25□□□□□ -0.29
VTI1B-204ENST00000554659 CICQ96RK0 1608 aaPredicted RBP13.25□□□□□ -0.29
VTI1B-204ENST00000554659 IFNA1P01562 189 aa13.25□□□□□ -0.29
VTI1B-204ENST00000554659 RNH1P13489 461 aaKnown RBP13.25□□□□□ -0.29
VTI1B-204ENST00000554659 GM2AP17900 193 aa13.25□□□□□ -0.29
VTI1B-204ENST00000554659 AAK1Q2M2I8 961 aa13.25□□□□□ -0.29
VTI1B-204ENST00000554659 MLIPQ5VWP3 458 aa13.25□□□□□ -0.29
VTI1B-204ENST00000554659 DESI1Q6ICB0 168 aa13.25□□□□□ -0.29
VTI1B-204ENST00000554659 ZNF551Q7Z340 670 aaPredicted RBP13.25□□□□□ -0.29
VTI1B-204ENST00000554659 PIWIL3Q7Z3Z3 882 aaKnown RBP13.25□□□□□ -0.29
VTI1B-204ENST00000554659 AMIGO3Q86WK7 504 aa13.25□□□□□ -0.29
VTI1B-204ENST00000554659 FAM217AQ8IXS0 508 aa13.25□□□□□ -0.29
VTI1B-204ENST00000554659 OR5T1Q8NG75 326 aa13.25□□□□□ -0.29
VTI1B-204ENST00000554659 ZNF225Q9UK10 706 aa13.25□□□□□ -0.29
VTI1B-204ENST00000554659 SLC16A8O95907 504 aa13.24□□□□□ -0.29
VTI1B-204ENST00000554659 C6P13671 934 aa13.24□□□□□ -0.29
VTI1B-204ENST00000554659 SDC1P18827 310 aa13.24□□□□□ -0.29
VTI1B-204ENST00000554659 TNFRSF1BP20333 461 aa13.24□□□□□ -0.29
VTI1B-204ENST00000554659 OR52E2Q8NGJ4 325 aa13.24□□□□□ -0.29
VTI1B-204ENST00000554659 OR8K5Q8NH50 307 aa13.24□□□□□ -0.29
VTI1B-204ENST00000554659 METTL2AQ96IZ6 378 aaKnown RBP13.24□□□□□ -0.29
VTI1B-204ENST00000554659 MSLNLQ96KJ4 702 aa13.24□□□□□ -0.29
VTI1B-204ENST00000554659 PTCHD1Q96NR3 888 aa13.24□□□□□ -0.29
VTI1B-204ENST00000554659 RBCK1Q9BYM8 510 aa13.24□□□□□ -0.29
VTI1B-204ENST00000554659 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.24□□□□□ -0.29
VTI1B-204ENST00000554659 MEPEQ9NQ76 525 aaPredicted RBP13.24□□□□□ -0.29
VTI1B-204ENST00000554659 SLCO3A1Q9UIG8 710 aa13.24□□□□□ -0.29
VTI1B-204ENST00000554659 KCNS2Q9ULS6 477 aa13.24□□□□□ -0.29
VTI1B-204ENST00000554659 C1orf196B1AJZ1 125 aa13.24□□□□□ -0.29
VTI1B-204ENST00000554659 IFNA10P01566 189 aa13.24□□□□□ -0.29
VTI1B-204ENST00000554659 KLK3P07288 261 aaPredicted RBP13.24□□□□□ -0.29
VTI1B-204ENST00000554659 ZXDBP98169 803 aa13.24□□□□□ -0.29
VTI1B-204ENST00000554659 PLGLB1Q02325 96 aa13.24□□□□□ -0.29
VTI1B-204ENST00000554659 RAB11BQ15907 218 aa13.24□□□□□ -0.29
VTI1B-204ENST00000554659 IQCF1Q8N6M8 205 aa13.24□□□□□ -0.29
VTI1B-204ENST00000554659 TRMT10AQ8TBZ6 339 aaKnown RBP13.24□□□□□ -0.29
VTI1B-204ENST00000554659 FAM46BQ96A09 425 aa13.24□□□□□ -0.29
VTI1B-204ENST00000554659 KLHDC7BQ96G42 594 aa13.24□□□□□ -0.29
VTI1B-204ENST00000554659 NTMT1Q9BV86 223 aa13.24□□□□□ -0.29
VTI1B-204ENST00000554659 DKKL1Q9UK85 242 aa13.24□□□□□ -0.29
VTI1B-204ENST00000554659 GPR52Q9Y2T5 361 aa13.24□□□□□ -0.29
VTI1B-204ENST00000554659 LOC285095A0A1B0GVY8 99 aa13.24□□□□□ -0.29
VTI1B-204ENST00000554659 CDK1P06493 297 aa13.24□□□□□ -0.29
VTI1B-204ENST00000554659 AMY2BP19961 511 aa13.24□□□□□ -0.29
VTI1B-204ENST00000554659 PITPNBP48739 271 aa13.24□□□□□ -0.29
VTI1B-204ENST00000554659 SLC14A2Q15849 920 aa13.24□□□□□ -0.29
VTI1B-204ENST00000554659 BCL2L15Q5TBC7 163 aa13.24□□□□□ -0.29
VTI1B-204ENST00000554659 MRPL10Q7Z7H8 261 aaKnown RBP13.24□□□□□ -0.29
VTI1B-204ENST00000554659 KLHDC8AQ8IYD2 350 aa13.24□□□□□ -0.29
VTI1B-204ENST00000554659 ARL14Q8N4G2 192 aa13.24□□□□□ -0.29
VTI1B-204ENST00000554659 OR2T4Q8NH00 348 aa13.24□□□□□ -0.29
VTI1B-204ENST00000554659 PBDC1Q9BVG4 233 aa13.24□□□□□ -0.29
VTI1B-204ENST00000554659 PCDHGA8Q9Y5G5 932 aa13.24□□□□□ -0.29
VTI1B-204ENST00000554659 OR6C74A6NCV1 312 aa13.24□□□□□ -0.29
VTI1B-204ENST00000554659 TRAPPC6AO75865 159 aa13.24□□□□□ -0.29
VTI1B-204ENST00000554659 HNRNPA1P09651 372 aaKnown RBP eCLIP13.24□□□□□ -0.29
VTI1B-204ENST00000554659 CD3GP09693 182 aa13.24□□□□□ -0.29
VTI1B-204ENST00000554659 ADORA3P0DMS8 318 aa13.24□□□□□ -0.29
VTI1B-204ENST00000554659 PGCP20142 388 aa13.24□□□□□ -0.29
VTI1B-204ENST00000554659 NR4A2P43354 598 aa13.24□□□□□ -0.29
VTI1B-204ENST00000554659 LSSP48449 732 aa13.24□□□□□ -0.29
VTI1B-204ENST00000554659 CAMLGP49069 296 aa13.24□□□□□ -0.29
VTI1B-204ENST00000554659 HNRNPFP52597 415 aaKnown RBP13.24□□□□□ -0.29
VTI1B-204ENST00000554659 RTP2Q5QGT7 225 aa13.24□□□□□ -0.29
VTI1B-204ENST00000554659 UBE2UQ5VVX9 321 aa13.24□□□□□ -0.29
VTI1B-204ENST00000554659 ZER1Q7Z7L7 766 aa13.24□□□□□ -0.29
VTI1B-204ENST00000554659 ADAMTS18Q8TE60 1221 aa13.24□□□□□ -0.29
VTI1B-204ENST00000554659 SGIP1Q9BQI5 828 aa13.24□□□□□ -0.29
VTI1B-204ENST00000554659 IL26Q9NPH9 171 aa13.24□□□□□ -0.29
VTI1B-204ENST00000554659 BIN3Q9NQY0 253 aa13.24□□□□□ -0.29
VTI1B-204ENST00000554659 SACM1LQ9NTJ5 587 aa13.24□□□□□ -0.29
VTI1B-204ENST00000554659 CNOT2Q9NZN8 540 aaKnown RBP13.24□□□□□ -0.29
VTI1B-204ENST00000554659 IQCF3P0C7M6 154 aa13.23□□□□□ -0.29
VTI1B-204ENST00000554659 ADRB3P13945 408 aa13.23□□□□□ -0.29
VTI1B-204ENST00000554659 RAB28P51157 221 aa13.23□□□□□ -0.29
VTI1B-204ENST00000554659 HSD11B2P80365 405 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms