RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 KDM4EB2RXH2 506 aaPredicted RBP4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 NPIPB11E5RHQ5 1161 aa4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 SOCS6O14544 535 aa4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 GYG2O15488 501 aa4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 PSMD3O43242 534 aa4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 SSX5O60225 188 aa4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 GPRIN2O60269 458 aa4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 TM7SF2O76062 418 aa4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 RHOBTB1O94844 696 aa4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 MT-CYBP00156 380 aaPredicted RBP4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 JCHAINP01591 159 aa4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 KRT8P05787 483 aa4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 C2P06681 752 aa4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 RPSAP08865 295 aaKnown RBP4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 STAG3L3P0CL85 134 aa4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 CBSLP0DN79 551 aa4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 CPA3P15088 417 aa4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 AREGP15514 252 aa4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 SRD5A1P18405 259 aa4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 PRKACBP22694 351 aa4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 SPRP35270 261 aaPredicted RBP4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 ADRA1AP35348 466 aa4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 CBSP35520 551 aa4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 WNT5AP41221 380 aa4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 NUMBP49757 651 aa4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 SERPINB8P50452 374 aa4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 CLCNKAP51800 687 aa4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 PNLIPRP2P54317 469 aa4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 ADARP55265 1226 aaKnown RBP4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 ABCE1P61221 599 aaKnown RBP4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 PDE1BQ01064 536 aa4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 GRIK3Q13003 919 aa4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 ITGADQ13349 1161 aa4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 HNRNPDQ14103 355 aaKnown RBP4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 ANGPT1Q15389 498 aa4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 DLG2Q15700 870 aa4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 SGCBQ16585 318 aa4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 UGP2Q16851 508 aa4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 COL28A1Q2UY09 1125 aa4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 PRTGQ2VWP7 1150 aa4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 CCDC153Q494R4 210 aa4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 KLHL26Q53HC5 615 aa4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 Q5PR19 223 aa4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 BRMS1LQ5PSV4 323 aa4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 FUT10Q6P4F1 479 aa4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 PRSS55Q6UWB4 352 aaPredicted RBP4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 PARM1Q6UWI2 310 aa4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 CFAP77Q6ZQR2 320 aa4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 CMC1Q7Z7K0 106 aa4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 PIP4P1Q86T03 277 aa4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 ZC3HC1Q86WB0 502 aaKnown RBP4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 MFSD6LQ8IWD5 586 aa4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 ZNF683Q8IZ20 524 aa4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 PARP16Q8N5Y8 322 aa4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 NRACQ8N912 160 aa4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 LEMD2Q8NC56 503 aa4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 SLC24A4Q8NFF2 622 aa4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 SPATA22Q8NHS9 363 aa4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 SLC26A7Q8TE54 656 aa4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 SMG7Q92540 1137 aaKnown RBP4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 BCL2L2Q92843 193 aaPredicted RBP4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 EXT2Q93063 718 aa4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 FBXO32Q969P5 355 aa4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 ART5Q96L15 291 aa4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 ANKRD27Q96NW4 1050 aa4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 OR2A14Q96R47 310 aa4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 GFM1Q96RP9 751 aaKnown RBP4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 GPR22Q99680 433 aa4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 APOL2Q9BQE5 337 aa4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 SLC29A3Q9BZD2 475 aa4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 SLC39A8Q9C0K1 460 aa4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 ZNF350Q9GZX5 532 aa4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 KLHL31Q9H511 634 aa4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 DCLRE1BQ9H816 532 aa4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 CAB39LQ9H9S4 337 aa4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 BPIFA1Q9NP55 256 aa4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 DMAP1Q9NPF5 467 aaPredicted RBP4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 CHRAC1Q9NRG0 131 aa4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 DLGAP2Q9P1A6 1054 aa4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 WNT16Q9UBV4 365 aa4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 NDRG3Q9UGV2 375 aa4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 GMEB2Q9UKD1 530 aa4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 MRPS7Q9Y2R9 242 aaKnown RBP4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 CHD5Q8TDI0 1954 aa4.87□□□□□ -1.63
MTHFD1-206ENST00000554353 KIF26AQ9ULI4 1882 aaPredicted RBP4.86□□□□□ -1.63
MTHFD1-206ENST00000554353 TICRRQ7Z2Z1 1910 aa4.86□□□□□ -1.63
MTHFD1-206ENST00000554353 A0A087WV48 116 aa4.86□□□□□ -1.63
MTHFD1-206ENST00000554353 IGLV5-39A0A0G2JS06 123 aa4.86□□□□□ -1.63
MTHFD1-206ENST00000554353 EDDM13A0A1B0GTR0 161 aa4.86□□□□□ -1.63
MTHFD1-206ENST00000554353 DNAJC9-AS1A6NH13 148 aa4.86□□□□□ -1.63
MTHFD1-206ENST00000554353 TMEM114B3SHH9 223 aa4.86□□□□□ -1.63
MTHFD1-206ENST00000554353 USP17L23D6RBM5 183 aa4.86□□□□□ -1.63
MTHFD1-206ENST00000554353 E9PI62 339 aa4.86□□□□□ -1.63
MTHFD1-206ENST00000554353 SPECC1L-ADORA2AF8WAN1 911 aa4.86□□□□□ -1.63
MTHFD1-206ENST00000554353 PLK4O00444 970 aa4.86□□□□□ -1.63
MTHFD1-206ENST00000554353 CCL16O15467 120 aa4.86□□□□□ -1.63
MTHFD1-206ENST00000554353 MITFO75030 526 aaPredicted RBP4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms