RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 VMACQ2NL98 169 aa13.46□□□□□ -0.25
SHMT2-210ENST00000553950 CYP27C1Q4G0S4 372 aa13.46□□□□□ -0.25
SHMT2-210ENST00000553950 COX20Q5RI15 118 aa13.46□□□□□ -0.25
SHMT2-210ENST00000553950 BROXQ5VW32 411 aa13.46□□□□□ -0.25
SHMT2-210ENST00000553950 PROSER1Q86XN7 944 aa13.46□□□□□ -0.25
SHMT2-210ENST00000553950 PTRH1Q86Y79 214 aaKnown RBP13.46□□□□□ -0.25
SHMT2-210ENST00000553950 TAGAPQ8N103 731 aa13.46□□□□□ -0.25
SHMT2-210ENST00000553950 SLC5A8Q8N695 610 aa13.46□□□□□ -0.25
SHMT2-210ENST00000553950 TMEM102Q8N9M5 508 aaPredicted RBP13.46□□□□□ -0.25
SHMT2-210ENST00000553950 CLEC1AQ8NC01 280 aa13.46□□□□□ -0.25
SHMT2-210ENST00000553950 BBS10Q8TAM1 723 aa13.46□□□□□ -0.25
SHMT2-210ENST00000553950 SLC22A8Q8TCC7 542 aa13.46□□□□□ -0.25
SHMT2-210ENST00000553950 GPR151Q8TDV0 419 aa13.46□□□□□ -0.25
SHMT2-210ENST00000553950 PMM1Q92871 262 aa13.46□□□□□ -0.25
SHMT2-210ENST00000553950 CCDC124Q96CT7 223 aaKnown RBP13.46□□□□□ -0.25
SHMT2-210ENST00000553950 LCORQ96JN0 433 aaPredicted RBP13.46□□□□□ -0.25
SHMT2-210ENST00000553950 CCNL2Q96S94 520 aaPredicted RBP13.46□□□□□ -0.25
SHMT2-210ENST00000553950 G6PC3Q9BUM1 346 aa13.46□□□□□ -0.25
SHMT2-210ENST00000553950 NUDT9Q9BW91 350 aa13.46□□□□□ -0.25
SHMT2-210ENST00000553950 BTBD2Q9BX70 525 aa13.46□□□□□ -0.25
SHMT2-210ENST00000553950 TMEM121BQ9BXQ6 578 aaPredicted RBP13.46□□□□□ -0.25
SHMT2-210ENST00000553950 DEFB126Q9BYW3 111 aa13.46□□□□□ -0.25
SHMT2-210ENST00000553950 ZNF160Q9HCG1 818 aa13.46□□□□□ -0.25
SHMT2-210ENST00000553950 CD300AQ9UGN4 299 aa13.46□□□□□ -0.25
SHMT2-210ENST00000553950 IL17BQ9UHF5 180 aa13.46□□□□□ -0.25
SHMT2-210ENST00000553950 CPAMD8Q8IZJ3 1885 aa13.45□□□□□ -0.26
SHMT2-210ENST00000553950 HRKO00198 91 aa13.45□□□□□ -0.26
SHMT2-210ENST00000553950 CDK2AP1O14519 115 aa13.45□□□□□ -0.26
SHMT2-210ENST00000553950 TO15178 435 aa13.45□□□□□ -0.26
SHMT2-210ENST00000553950 PDE5AO76074 875 aa13.45□□□□□ -0.26
SHMT2-210ENST00000553950 IFNA14P01570 189 aa13.45□□□□□ -0.26
SHMT2-210ENST00000553950 SERPINA7P05543 415 aa13.45□□□□□ -0.26
SHMT2-210ENST00000553950 BCHEP06276 602 aa13.45□□□□□ -0.26
SHMT2-210ENST00000553950 OR12D1P0DN82 309 aa13.45□□□□□ -0.26
SHMT2-210ENST00000553950 NR2F1P10589 423 aa13.45□□□□□ -0.26
SHMT2-210ENST00000553950 ACP2P11117 423 aa13.45□□□□□ -0.26
SHMT2-210ENST00000553950 NQO1P15559 274 aaKnown RBP13.45□□□□□ -0.26
SHMT2-210ENST00000553950 ATP6V1C1P21283 382 aa13.45□□□□□ -0.26
SHMT2-210ENST00000553950 CDK6Q00534 326 aa13.45□□□□□ -0.26
SHMT2-210ENST00000553950 ATP1A4Q13733 1029 aa13.45□□□□□ -0.26
SHMT2-210ENST00000553950 CEACAM7Q14002 265 aa13.45□□□□□ -0.26
SHMT2-210ENST00000553950 SCARB2Q14108 478 aa13.45□□□□□ -0.26
SHMT2-210ENST00000553950 ELOAQ14241 798 aaKnown RBP13.45□□□□□ -0.26
SHMT2-210ENST00000553950 TRIM25Q14258 630 aaKnown RBP13.45□□□□□ -0.26
SHMT2-210ENST00000553950 DUSP5Q16690 384 aa13.45□□□□□ -0.26
SHMT2-210ENST00000553950 DECR1Q16698 335 aa13.45□□□□□ -0.26
SHMT2-210ENST00000553950 ARHGAP11BQ3KRB8 267 aa13.45□□□□□ -0.26
SHMT2-210ENST00000553950 HEPHL1Q6MZM0 1159 aa13.45□□□□□ -0.26
SHMT2-210ENST00000553950 REEP3Q6NUK4 255 aa13.45□□□□□ -0.26
SHMT2-210ENST00000553950 PGM2L1Q6PCE3 622 aa13.45□□□□□ -0.26
SHMT2-210ENST00000553950 ERMP1Q7Z2K6 904 aa13.45□□□□□ -0.26
SHMT2-210ENST00000553950 VASH2Q86V25 355 aa13.45□□□□□ -0.26
SHMT2-210ENST00000553950 IFNEQ86WN2 208 aa13.45□□□□□ -0.26
SHMT2-210ENST00000553950 KRT73Q86Y46 540 aa13.45□□□□□ -0.26
SHMT2-210ENST00000553950 C9orf40Q8IXQ3 194 aa13.45□□□□□ -0.26
SHMT2-210ENST00000553950 ZZZ3Q8IYH5 903 aa13.45□□□□□ -0.26
SHMT2-210ENST00000553950 C10orf67Q8IYJ2 551 aa13.45□□□□□ -0.26
SHMT2-210ENST00000553950 DND1Q8IYX4 353 aaKnown RBP13.45□□□□□ -0.26
SHMT2-210ENST00000553950 SLC15A4Q8N697 577 aa13.45□□□□□ -0.26
SHMT2-210ENST00000553950 CHDHQ8NE62 594 aaPredicted RBP13.45□□□□□ -0.26
SHMT2-210ENST00000553950 OR5D16Q8NGK9 328 aa13.45□□□□□ -0.26
SHMT2-210ENST00000553950 FBXO30Q8TB52 745 aa13.45□□□□□ -0.26
SHMT2-210ENST00000553950 ELP5Q8TE02 316 aa13.45□□□□□ -0.26
SHMT2-210ENST00000553950 XAGE5Q8WWM1 108 aa13.45□□□□□ -0.26
SHMT2-210ENST00000553950 RASSF5Q8WWW0 418 aa13.45□□□□□ -0.26
SHMT2-210ENST00000553950 ZNF583Q96ND8 569 aa13.45□□□□□ -0.26
SHMT2-210ENST00000553950 TRNT1Q96Q11 434 aaKnown RBP13.45□□□□□ -0.26
SHMT2-210ENST00000553950 SPATA5L1Q9BVQ7 753 aa13.45□□□□□ -0.26
SHMT2-210ENST00000553950 TRIM8Q9BZR9 551 aa13.45□□□□□ -0.26
SHMT2-210ENST00000553950 SERHL2Q9H4I8 314 aa13.45□□□□□ -0.26
SHMT2-210ENST00000553950 ANKRA2Q9H9E1 313 aa13.45□□□□□ -0.26
SHMT2-210ENST00000553950 TEKT2Q9UIF3 430 aa13.45□□□□□ -0.26
SHMT2-210ENST00000553950 POLHQ9Y253 713 aa13.45□□□□□ -0.26
SHMT2-210ENST00000553950 MRPS18BQ9Y676 258 aaKnown RBP13.45□□□□□ -0.26
SHMT2-210ENST00000553950 CDC14CA4D256 554 aa13.44□□□□□ -0.26
SHMT2-210ENST00000553950 A8MVJ9 347 aa13.44□□□□□ -0.26
SHMT2-210ENST00000553950 KLK10O43240 276 aa13.44□□□□□ -0.26
SHMT2-210ENST00000553950 SLC28A2O43868 658 aa13.44□□□□□ -0.26
SHMT2-210ENST00000553950 ABCB7O75027 752 aa13.44□□□□□ -0.26
SHMT2-210ENST00000553950 HOXB6P17509 224 aaKnown RBP13.44□□□□□ -0.26
SHMT2-210ENST00000553950 TCN1P20061 433 aaPredicted RBP13.44□□□□□ -0.26
SHMT2-210ENST00000553950 GABRA3P34903 492 aa13.44□□□□□ -0.26
SHMT2-210ENST00000553950 GZMMP51124 257 aa13.44□□□□□ -0.26
SHMT2-210ENST00000553950 UCNP55089 124 aa13.44□□□□□ -0.26
SHMT2-210ENST00000553950 PSG6Q00889 435 aa13.44□□□□□ -0.26
SHMT2-210ENST00000553950 CDC20Q12834 499 aa13.44□□□□□ -0.26
SHMT2-210ENST00000553950 CHAF1BQ13112 559 aa13.44□□□□□ -0.26
SHMT2-210ENST00000553950 GPAT3Q53EU6 434 aa13.44□□□□□ -0.26
SHMT2-210ENST00000553950 DCST2Q5T1A1 773 aa13.44□□□□□ -0.26
SHMT2-210ENST00000553950 FAM69BQ5VUD6 431 aa13.44□□□□□ -0.26
SHMT2-210ENST00000553950 LRRC74BQ6ZQY2 392 aa13.44□□□□□ -0.26
SHMT2-210ENST00000553950 PATL1Q86TB9 770 aaKnown RBP13.44□□□□□ -0.26
SHMT2-210ENST00000553950 PTOV1Q86YD1 416 aa13.44□□□□□ -0.26
SHMT2-210ENST00000553950 HPS6Q86YV9 775 aa13.44□□□□□ -0.26
SHMT2-210ENST00000553950 SLC44A2Q8IWA5 706 aaPredicted RBP13.44□□□□□ -0.26
SHMT2-210ENST00000553950 ZNF441Q8N8Z8 693 aa13.44□□□□□ -0.26
SHMT2-210ENST00000553950 SLC16A11Q8NCK7 471 aa13.44□□□□□ -0.26
SHMT2-210ENST00000553950 OR52E4Q8NGH9 312 aa13.44□□□□□ -0.26
SHMT2-210ENST00000553950 CDS1Q92903 461 aa13.44□□□□□ -0.26
SHMT2-210ENST00000553950 C16orf58Q96GQ5 468 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms