RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 NAPBQ9H115 298 aa2.75□□□□□ -1.97
SCFD1-210ENST00000553693 NT5DC2Q9H857 520 aa2.75□□□□□ -1.97
SCFD1-210ENST00000553693 RNPEPL1Q9HAU8 725 aa2.75□□□□□ -1.97
SCFD1-210ENST00000553693 ABCC13Q9NSE7 274 aa2.75□□□□□ -1.97
SCFD1-210ENST00000553693 ITGB4P16144 1822 aa2.75□□□□□ -1.97
SCFD1-210ENST00000553693 VIRMAQ69YN4 1812 aaKnown RBP2.75□□□□□ -1.97
SCFD1-210ENST00000553693 RAB3GAP2Q9H2M9 1393 aa2.74□□□□□ -1.97
SCFD1-210ENST00000553693 USP42Q9H9J4 1324 aaKnown RBP2.74□□□□□ -1.97
SCFD1-210ENST00000553693 MON2Q7Z3U7 1717 aa2.74□□□□□ -1.97
SCFD1-210ENST00000553693 FAM149AA5PLN7 773 aa2.74□□□□□ -1.97
SCFD1-210ENST00000553693 C5orf52A6NGY3 159 aa2.74□□□□□ -1.97
SCFD1-210ENST00000553693 CACNB4O00305 520 aaPredicted RBP2.74□□□□□ -1.97
SCFD1-210ENST00000553693 CCSO14618 274 aa2.74□□□□□ -1.97
SCFD1-210ENST00000553693 ATP6V1G1O75348 118 aa2.74□□□□□ -1.97
SCFD1-210ENST00000553693 GAS8O95995 478 aa2.74□□□□□ -1.97
SCFD1-210ENST00000553693 FHP07954 510 aa2.74□□□□□ -1.97
SCFD1-210ENST00000553693 ARF4P18085 180 aaPredicted RBP2.74□□□□□ -1.97
SCFD1-210ENST00000553693 GDF1P27539 372 aa2.74□□□□□ -1.97
SCFD1-210ENST00000553693 PPP2R1BP30154 601 aa2.74□□□□□ -1.97
SCFD1-210ENST00000553693 MDH2P40926 338 aaKnown RBP2.74□□□□□ -1.97
SCFD1-210ENST00000553693 CASP3P42574 277 aa2.74□□□□□ -1.97
SCFD1-210ENST00000553693 KCNJ1P48048 391 aa2.74□□□□□ -1.97
SCFD1-210ENST00000553693 KIAA1024LP59773 190 aa2.74□□□□□ -1.97
SCFD1-210ENST00000553693 PRKCEQ02156 737 aa2.74□□□□□ -1.97
SCFD1-210ENST00000553693 KHDRBS2Q5VWX1 349 aaKnown RBP2.74□□□□□ -1.97
SCFD1-210ENST00000553693 CATSPER4Q7RTX7 472 aa2.74□□□□□ -1.97
SCFD1-210ENST00000553693 CACUL1Q86Y37 369 aa2.74□□□□□ -1.97
SCFD1-210ENST00000553693 ARL14Q8N4G2 192 aa2.74□□□□□ -1.97
SCFD1-210ENST00000553693 UXS1Q8NBZ7 420 aa2.74□□□□□ -1.97
SCFD1-210ENST00000553693 NEK11Q8NG66 645 aa2.74□□□□□ -1.97
SCFD1-210ENST00000553693 GPR148Q8TDV2 347 aa2.74□□□□□ -1.97
SCFD1-210ENST00000553693 RSPH1Q8WYR4 309 aa2.74□□□□□ -1.97
SCFD1-210ENST00000553693 TAF4BQ92750 862 aa2.74□□□□□ -1.97
SCFD1-210ENST00000553693 AP2M1Q96CW1 435 aa2.74□□□□□ -1.97
SCFD1-210ENST00000553693 NUS1Q96E22 293 aa2.74□□□□□ -1.97
SCFD1-210ENST00000553693 CDKN2AIPNLQ96HQ2 116 aa2.74□□□□□ -1.97
SCFD1-210ENST00000553693 COG3Q96JB2 828 aa2.74□□□□□ -1.97
SCFD1-210ENST00000553693 CAPNS2Q96L46 248 aa2.74□□□□□ -1.97
SCFD1-210ENST00000553693 SPXQ9BT56 116 aa2.74□□□□□ -1.97
SCFD1-210ENST00000553693 IDI2Q9BXS1 227 aa2.74□□□□□ -1.97
SCFD1-210ENST00000553693 CACNG6Q9BXT2 260 aa2.74□□□□□ -1.97
SCFD1-210ENST00000553693 DPEP3Q9H4B8 488 aa2.74□□□□□ -1.97
SCFD1-210ENST00000553693 HPF1Q9NWY4 346 aa2.74□□□□□ -1.97
SCFD1-210ENST00000553693 CNIH4Q9P003 139 aa2.74□□□□□ -1.97
SCFD1-210ENST00000553693 EXOC6BQ9Y2D4 811 aa2.74□□□□□ -1.97
SCFD1-210ENST00000553693 NTNG1Q9Y2I2 539 aa2.74□□□□□ -1.97
SCFD1-210ENST00000553693 MTF2Q9Y483 593 aaPredicted RBP2.74□□□□□ -1.97
SCFD1-210ENST00000553693 EDC4Q6P2E9 1401 aaKnown RBP2.74□□□□□ -1.97
SCFD1-210ENST00000553693 A0A1W2PP64 1363 aa2.74□□□□□ -1.97
SCFD1-210ENST00000553693 KDRP35968 1356 aa2.74□□□□□ -1.97
SCFD1-210ENST00000553693 TIAM2Q8IVF5 1701 aa2.73□□□□□ -1.97
SCFD1-210ENST00000553693 SMIM30A4D0T7 59 aa2.73□□□□□ -1.97
SCFD1-210ENST00000553693 ANKDD1BA6NHY2 528 aa2.73□□□□□ -1.97
SCFD1-210ENST00000553693 RNF212BA8MTL3 300 aa2.73□□□□□ -1.97
SCFD1-210ENST00000553693 CTDSPLO15194 276 aa2.73□□□□□ -1.97
SCFD1-210ENST00000553693 TTI1O43156 1089 aa2.73□□□□□ -1.97
SCFD1-210ENST00000553693 ST8SIA3O43173 380 aa2.73□□□□□ -1.97
SCFD1-210ENST00000553693 TSC22D2O75157 780 aa2.73□□□□□ -1.97
SCFD1-210ENST00000553693 REC8O95072 547 aa2.73□□□□□ -1.97
SCFD1-210ENST00000553693 FCGR3AP08637 254 aa2.73□□□□□ -1.97
SCFD1-210ENST00000553693 HSD17B1P14061 328 aa2.73□□□□□ -1.97
SCFD1-210ENST00000553693 FOSL2P15408 326 aa2.73□□□□□ -1.97
SCFD1-210ENST00000553693 IL10P22301 178 aa2.73□□□□□ -1.97
SCFD1-210ENST00000553693 FRKP42685 505 aaPredicted RBP2.73□□□□□ -1.97
SCFD1-210ENST00000553693 GALK2Q01415 458 aa2.73□□□□□ -1.97
SCFD1-210ENST00000553693 AKAP17AQ02040 695 aaKnown RBP2.73□□□□□ -1.97
SCFD1-210ENST00000553693 FOLH1Q04609 750 aa2.73□□□□□ -1.97
SCFD1-210ENST00000553693 RPS6KA1Q15418 735 aa2.73□□□□□ -1.97
SCFD1-210ENST00000553693 PARP10Q53GL7 1025 aa2.73□□□□□ -1.97
SCFD1-210ENST00000553693 TOR1AIP1Q5JTV8 583 aa2.73□□□□□ -1.97
SCFD1-210ENST00000553693 LYPLAL1Q5VWZ2 237 aa2.73□□□□□ -1.97
SCFD1-210ENST00000553693 CST9Q5W186 159 aa2.73□□□□□ -1.97
SCFD1-210ENST00000553693 ZNF619Q8N2I2 560 aa2.73□□□□□ -1.97
SCFD1-210ENST00000553693 KIAA0895Q8NCT3 520 aa2.73□□□□□ -1.97
SCFD1-210ENST00000553693 CCDC110Q8TBZ0 833 aa2.73□□□□□ -1.97
SCFD1-210ENST00000553693 VN1R17PQ8TDU5 208 aa2.73□□□□□ -1.97
SCFD1-210ENST00000553693 TCP11Q8WWU5 503 aa2.73□□□□□ -1.97
SCFD1-210ENST00000553693 ATP6V0BQ99437 205 aa2.73□□□□□ -1.97
SCFD1-210ENST00000553693 NAP1L3Q99457 506 aaPredicted RBP2.73□□□□□ -1.97
SCFD1-210ENST00000553693 ATG101Q9BSB4 218 aa2.73□□□□□ -1.97
SCFD1-210ENST00000553693 KRT23Q9C075 422 aa2.73□□□□□ -1.97
SCFD1-210ENST00000553693 C1orf21Q9H246 121 aa2.73□□□□□ -1.97
SCFD1-210ENST00000553693 CUEDC2Q9H467 287 aa2.73□□□□□ -1.97
SCFD1-210ENST00000553693 SRD5A3Q9H8P0 318 aa2.73□□□□□ -1.97
SCFD1-210ENST00000553693 ANO10Q9NW15 660 aa2.73□□□□□ -1.97
SCFD1-210ENST00000553693 SPG21Q9NZD8 308 aa2.73□□□□□ -1.97
SCFD1-210ENST00000553693 IL19Q9UHD0 177 aa2.73□□□□□ -1.97
SCFD1-210ENST00000553693 RNF24Q9Y225 148 aa2.73□□□□□ -1.97
SCFD1-210ENST00000553693 TMED7Q9Y3B3 224 aa2.73□□□□□ -1.97
SCFD1-210ENST00000553693 ETV7Q9Y603 341 aa2.73□□□□□ -1.97
SCFD1-210ENST00000553693 CCDC88AQ3V6T2 1871 aa2.73□□□□□ -1.97
SCFD1-210ENST00000553693 INSRP06213 1382 aa2.73□□□□□ -1.97
SCFD1-210ENST00000553693 CARMIL3Q8ND23 1372 aa2.73□□□□□ -1.97
SCFD1-210ENST00000553693 CPLX1O14810 134 aa2.72□□□□□ -1.97
SCFD1-210ENST00000553693 SELENOFO60613 162 aa2.72□□□□□ -1.97
SCFD1-210ENST00000553693 ATP9AO75110 1047 aa2.72□□□□□ -1.97
SCFD1-210ENST00000553693 DUSP11O75319 330 aaKnown RBP2.72□□□□□ -1.97
SCFD1-210ENST00000553693 SEC22BO75396 215 aa2.72□□□□□ -1.97
SCFD1-210ENST00000553693 LETM1O95202 739 aaPredicted RBP2.72□□□□□ -1.97
SCFD1-210ENST00000553693 LYPD3O95274 346 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms