RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 B4GALT2O60909 372 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 COQ9O75208 318 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 FKBP6O75344 327 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 CSO75390 466 aaKnown RBP4.68□□□□□ -1.66
VTI1B-202ENST00000553619 IFNA14P01570 189 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 IGHEP01854 428 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 IFNA16P05015 189 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 ATP1B1P05026 303 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 HEXBP07686 556 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 FTH1P19P0C7X4 201 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 C8orf89P0DMQ9 161 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 UMPSP11172 480 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 NT5EP21589 574 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 MATN1P21941 496 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 CD82P27701 267 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 THBS2P35442 1172 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 SOAT1P35610 550 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 FEN1P39748 380 aaKnown RBP4.68□□□□□ -1.66
VTI1B-202ENST00000553619 CRATP43155 626 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 OR1D4P47884 311 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 SLC7A2P52569 658 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 HBA1P69905 142 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 SIM1P81133 766 aaPredicted RBP4.68□□□□□ -1.66
VTI1B-202ENST00000553619 SHC2P98077 582 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 FOLH1Q04609 750 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 LIPEQ05469 1076 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 MAP4K2Q12851 820 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 HSPB3Q12988 150 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 C16orf72Q14CZ0 275 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 ZNHIT3Q15649 155 aaPredicted RBP4.68□□□□□ -1.66
VTI1B-202ENST00000553619 NKAIN1Q4KMZ8 207 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 PIGGQ5H8A4 983 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 MTX3Q5HYI7 312 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 ATAD3BQ5T9A4 648 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 INTS11Q5TA45 600 aaKnown RBP4.68□□□□□ -1.66
VTI1B-202ENST00000553619 C1orf146Q5VVC0 180 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 MLIPQ5VWP3 458 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 ANKRD26P1Q6NSI1 321 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 PWWP2BQ6NUJ5 590 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 C8orf82Q6P1X6 216 aaPredicted RBP4.68□□□□□ -1.66
VTI1B-202ENST00000553619 PGM2L1Q6PCE3 622 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 ANGPTL8Q6UXH0 198 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 QSOX2Q6ZRP7 698 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 OVCH1Q7RTY7 1134 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 C6orf120Q7Z4R8 191 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 SERPINA11Q86U17 422 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 ANKRD46Q86W74 232 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 DHFR2Q86XF0 187 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 PDSS2Q86YH6 399 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 ULK2Q8IYT8 1036 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 ST13P4Q8IZP2 240 aaPredicted RBP4.68□□□□□ -1.66
VTI1B-202ENST00000553619 LGI4Q8N135 537 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 KIF2BQ8N4N8 673 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 DEFB124Q8NES8 71 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 OR2T12Q8NG77 320 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 OR5T3Q8NGG3 340 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 OR52N2Q8NGI0 321 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 OR10A6Q8NH74 314 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 ZNF675Q8TD23 568 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 ADAMTS17Q8TE56 1095 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 ADAMTS15Q8TE58 950 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 ZFP90Q8TF47 636 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 METTL21AQ8WXB1 218 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 JADE3Q92613 823 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 PMM1Q92871 262 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 DAZLQ92904 295 aaKnown RBP4.68□□□□□ -1.66
VTI1B-202ENST00000553619 TMEM125Q96AQ2 219 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 CIDECQ96AQ7 238 aaPredicted RBP4.68□□□□□ -1.66
VTI1B-202ENST00000553619 FKBP10Q96AY3 582 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 ASB9Q96DX5 294 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 ZNF681Q96N22 645 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 AMDHD1Q96NU7 426 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 KCTD14Q9BQ13 255 aaPredicted RBP4.68□□□□□ -1.66
VTI1B-202ENST00000553619 SYT3Q9BQG1 590 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 SLC35A5Q9BS91 424 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 INPP5KQ9BT40 448 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 SLC26A1Q9H2B4 701 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 GLIPR2Q9H4G4 154 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 TRIM45Q9H8W5 580 aaPredicted RBP4.68□□□□□ -1.66
VTI1B-202ENST00000553619 SERHLQ9NQF3 203 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 EXD2Q9NVH0 621 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 SIDT1Q9NXL6 827 aaKnown RBP4.68□□□□□ -1.66
VTI1B-202ENST00000553619 CALML5Q9NZT1 146 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 VAPAQ9P0L0 249 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 HCN3Q9P1Z3 774 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 ABCD2Q9UBJ2 740 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 DHCR7Q9UBM7 475 aaKnown RBP4.68□□□□□ -1.66
VTI1B-202ENST00000553619 C19orf25Q9UFG5 118 aaPredicted RBP4.68□□□□□ -1.66
VTI1B-202ENST00000553619 CD300AQ9UGN4 299 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 PADI1Q9ULC6 663 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 FAF1Q9UNN5 650 aaPredicted RBP4.68□□□□□ -1.66
VTI1B-202ENST00000553619 EXO1Q9UQ84 846 aaKnown RBP4.68□□□□□ -1.66
VTI1B-202ENST00000553619 MRPS2Q9Y399 296 aaKnown RBP4.68□□□□□ -1.66
VTI1B-202ENST00000553619 RRP15Q9Y3B9 282 aaKnown RBP4.68□□□□□ -1.66
VTI1B-202ENST00000553619 LOXL2Q9Y4K0 774 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 PCDHGA8Q9Y5G5 932 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 PCDHGA3Q9Y5H0 932 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 SNX8Q9Y5X2 465 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 MAU2Q9Y6X3 613 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 TTC28Q96AY4 2481 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms