RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 TMEM81Q6P7N7 255 aa6.59□□□□□ -1.35
ATXN3-219ENST00000553488 VHLLQ6RSH7 139 aa6.59□□□□□ -1.35
ATXN3-219ENST00000553488 CYP2R1Q6VVX0 501 aa6.59□□□□□ -1.35
ATXN3-219ENST00000553488 FRA10AC1Q70Z53 315 aa6.59□□□□□ -1.35
ATXN3-219ENST00000553488 YRDCQ86U90 279 aaKnown RBP6.59□□□□□ -1.35
ATXN3-219ENST00000553488 PPIL6Q8IXY8 311 aa6.59□□□□□ -1.35
ATXN3-219ENST00000553488 NKAPQ8N5F7 415 aaKnown RBP6.59□□□□□ -1.35
ATXN3-219ENST00000553488 SRFBP1Q8NEF9 429 aaKnown RBP6.59□□□□□ -1.35
ATXN3-219ENST00000553488 C7orf57Q8NEG2 295 aa6.59□□□□□ -1.35
ATXN3-219ENST00000553488 INTS12Q96CB8 462 aaKnown RBP6.59□□□□□ -1.35
ATXN3-219ENST00000553488 PIK3IP1Q96FE7 263 aa6.59□□□□□ -1.35
ATXN3-219ENST00000553488 WFIKKN1Q96NZ8 548 aa6.59□□□□□ -1.35
ATXN3-219ENST00000553488 SORBS1Q9BX66 1292 aaKnown RBP6.59□□□□□ -1.35
ATXN3-219ENST00000553488 ZNF717Q9BY31 904 aaPredicted RBP6.59□□□□□ -1.35
ATXN3-219ENST00000553488 OR2B2Q9GZK3 357 aa6.59□□□□□ -1.35
ATXN3-219ENST00000553488 DNAJC11Q9NVH1 559 aa6.59□□□□□ -1.35
ATXN3-219ENST00000553488 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.59□□□□□ -1.35
ATXN3-219ENST00000553488 KLHL28Q9NXS3 571 aa6.59□□□□□ -1.35
ATXN3-219ENST00000553488 KLHL14Q9P2G3 628 aa6.59□□□□□ -1.35
ATXN3-219ENST00000553488 CGGBP1Q9UFW8 167 aaPredicted RBP6.59□□□□□ -1.35
ATXN3-219ENST00000553488 PACSIN3Q9UKS6 424 aa6.59□□□□□ -1.35
ATXN3-219ENST00000553488 SPACA6W5XKT8 324 aa6.59□□□□□ -1.35
ATXN3-219ENST00000553488 FREM1Q5H8C1 2179 aa6.59□□□□□ -1.35
ATXN3-219ENST00000553488 MALRD1Q5VYJ5 2156 aa6.58□□□□□ -1.36
ATXN3-219ENST00000553488 IQANK1A0A1B0GTG1 560 aa6.58□□□□□ -1.36
ATXN3-219ENST00000553488 NCF1BA6NI72 391 aaPredicted RBP6.58□□□□□ -1.36
ATXN3-219ENST00000553488 NCF1CA8MVU1 366 aaPredicted RBP6.58□□□□□ -1.36
ATXN3-219ENST00000553488 H0Y3Z8 333 aa6.58□□□□□ -1.36
ATXN3-219ENST00000553488 CASKO14936 926 aa6.58□□□□□ -1.36
ATXN3-219ENST00000553488 SH3BGRLO75368 114 aa6.58□□□□□ -1.36
ATXN3-219ENST00000553488 C8BP07358 591 aa6.58□□□□□ -1.36
ATXN3-219ENST00000553488 NCF1P14598 390 aaPredicted RBP6.58□□□□□ -1.36
ATXN3-219ENST00000553488 PRKCAP17252 672 aa6.58□□□□□ -1.36
ATXN3-219ENST00000553488 PTMSP20962 102 aa6.58□□□□□ -1.36
ATXN3-219ENST00000553488 GALNSP34059 522 aa6.58□□□□□ -1.36
ATXN3-219ENST00000553488 SSR2P43308 183 aa6.58□□□□□ -1.36
ATXN3-219ENST00000553488 MASP1P48740 699 aa6.58□□□□□ -1.36
ATXN3-219ENST00000553488 HSPA7P48741 367 aa6.58□□□□□ -1.36
ATXN3-219ENST00000553488 TMED10P49755 219 aaKnown RBP6.58□□□□□ -1.36
ATXN3-219ENST00000553488 LHX2P50458 406 aa6.58□□□□□ -1.36
ATXN3-219ENST00000553488 GFRA1P56159 465 aa6.58□□□□□ -1.36
ATXN3-219ENST00000553488 TAS2R39P59534 338 aa6.58□□□□□ -1.36
ATXN3-219ENST00000553488 FAM27E3Q08E93 113 aa6.58□□□□□ -1.36
ATXN3-219ENST00000553488 BIKQ13323 160 aa6.58□□□□□ -1.36
ATXN3-219ENST00000553488 ZNF267Q14586 743 aaPredicted RBP6.58□□□□□ -1.36
ATXN3-219ENST00000553488 TBCCQ15814 346 aa6.58□□□□□ -1.36
ATXN3-219ENST00000553488 PDK4Q16654 411 aa6.58□□□□□ -1.36
ATXN3-219ENST00000553488 TMEM35AQ53FP2 167 aa6.58□□□□□ -1.36
ATXN3-219ENST00000553488 KHDRBS2Q5VWX1 349 aaKnown RBP6.58□□□□□ -1.36
ATXN3-219ENST00000553488 MRM1Q6IN84 353 aaKnown RBP6.58□□□□□ -1.36
ATXN3-219ENST00000553488 HEPHL1Q6MZM0 1159 aa6.58□□□□□ -1.36
ATXN3-219ENST00000553488 VWA1Q6PCB0 445 aa6.58□□□□□ -1.36
ATXN3-219ENST00000553488 CCDC137Q6PK04 289 aaKnown RBP6.58□□□□□ -1.36
ATXN3-219ENST00000553488 ZC3HC1Q86WB0 502 aaKnown RBP6.58□□□□□ -1.36
ATXN3-219ENST00000553488 LAS2Q8IYD9 372 aa6.58□□□□□ -1.36
ATXN3-219ENST00000553488 TAGAPQ8N103 731 aa6.58□□□□□ -1.36
ATXN3-219ENST00000553488 ZCCHC7Q8N3Z6 543 aaKnown RBP6.58□□□□□ -1.36
ATXN3-219ENST00000553488 PDPRQ8NCN5 879 aa6.58□□□□□ -1.36
ATXN3-219ENST00000553488 ADCY4Q8NFM4 1077 aa6.58□□□□□ -1.36
ATXN3-219ENST00000553488 TANKQ92844 425 aa6.58□□□□□ -1.36
ATXN3-219ENST00000553488 HGDQ93099 445 aa6.58□□□□□ -1.36
ATXN3-219ENST00000553488 ADIPOR1Q96A54 375 aa6.58□□□□□ -1.36
ATXN3-219ENST00000553488 MAGOHBQ96A72 148 aaKnown RBP6.58□□□□□ -1.36
ATXN3-219ENST00000553488 ESAMQ96AP7 390 aa6.58□□□□□ -1.36
ATXN3-219ENST00000553488 RBM18Q96H35 190 aaKnown RBP6.58□□□□□ -1.36
ATXN3-219ENST00000553488 VPS39Q96JC1 886 aa6.58□□□□□ -1.36
ATXN3-219ENST00000553488 PELOQ9BRX2 385 aaKnown RBP6.58□□□□□ -1.36
ATXN3-219ENST00000553488 NAT9Q9BTE0 207 aa6.58□□□□□ -1.36
ATXN3-219ENST00000553488 CAPS2Q9BXY5 557 aa6.58□□□□□ -1.36
ATXN3-219ENST00000553488 RPF2Q9H7B2 306 aaKnown RBP6.58□□□□□ -1.36
ATXN3-219ENST00000553488 SNX15Q9NRS6 342 aa6.58□□□□□ -1.36
ATXN3-219ENST00000553488 ZNF701Q9NV72 531 aaPredicted RBP6.58□□□□□ -1.36
ATXN3-219ENST00000553488 WWOXQ9NZC7 414 aa6.58□□□□□ -1.36
ATXN3-219ENST00000553488 CTNNAL1Q9UBT7 734 aa6.58□□□□□ -1.36
ATXN3-219ENST00000553488 NDRG3Q9UGV2 375 aa6.58□□□□□ -1.36
ATXN3-219ENST00000553488 DTX4Q9Y2E6 619 aa6.58□□□□□ -1.36
ATXN3-219ENST00000553488 ALPK2Q86TB3 2170 aa6.58□□□□□ -1.36
ATXN3-219ENST00000553488 C2orf92A0A1B0GVN3 265 aa6.57□□□□□ -1.36
ATXN3-219ENST00000553488 ANKRD34BA5PLL1 514 aa6.57□□□□□ -1.36
ATXN3-219ENST00000553488 WASHC1A8K0Z3 465 aa6.57□□□□□ -1.36
ATXN3-219ENST00000553488 B4DXG7 233 aa6.57□□□□□ -1.36
ATXN3-219ENST00000553488 SAP18O00422 153 aaKnown RBP6.57□□□□□ -1.36
ATXN3-219ENST00000553488 PLOD2O00469 737 aa6.57□□□□□ -1.36
ATXN3-219ENST00000553488 PLPP1O14494 284 aa6.57□□□□□ -1.36
ATXN3-219ENST00000553488 DNALI1O14645 258 aaPredicted RBP6.57□□□□□ -1.36
ATXN3-219ENST00000553488 CLGNO14967 610 aa6.57□□□□□ -1.36
ATXN3-219ENST00000553488 TMPRSS11DO60235 418 aa6.57□□□□□ -1.36
ATXN3-219ENST00000553488 PPM1BO75688 479 aa6.57□□□□□ -1.36
ATXN3-219ENST00000553488 GPR75O95800 540 aa6.57□□□□□ -1.36
ATXN3-219ENST00000553488 TGM6O95932 706 aa6.57□□□□□ -1.36
ATXN3-219ENST00000553488 CD3EP07766 207 aa6.57□□□□□ -1.36
ATXN3-219ENST00000553488 ABCB1P08183 1280 aaPredicted RBP6.57□□□□□ -1.36
ATXN3-219ENST00000553488 CT62P0C5K7 136 aa6.57□□□□□ -1.36
ATXN3-219ENST00000553488 RHOXF2BP0C7M4 288 aa6.57□□□□□ -1.36
ATXN3-219ENST00000553488 ZNF708P17019 499 aa6.57□□□□□ -1.36
ATXN3-219ENST00000553488 GPX3P22352 226 aa6.57□□□□□ -1.36
ATXN3-219ENST00000553488 CHMP24386 653 aa6.57□□□□□ -1.36
ATXN3-219ENST00000553488 ABCD3P28288 659 aa6.57□□□□□ -1.36
ATXN3-219ENST00000553488 UGT2B10P36537 528 aa6.57□□□□□ -1.36
ATXN3-219ENST00000553488 CD79BP40259 229 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms