RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 ZNF451Q9Y4E5 1061 aa13.69□□□□□ -0.22
MTHFD1-204ENST00000553405 KCNE3Q9Y6H6 103 aa13.69□□□□□ -0.22
MTHFD1-204ENST00000553405 FAM208BQ5VWN6 2430 aa13.68□□□□□ -0.22
MTHFD1-204ENST00000553405 LOC100653049A0A140TA62 436 aa13.68□□□□□ -0.22
MTHFD1-204ENST00000553405 GXYLT2A0PJZ3 443 aa13.68□□□□□ -0.22
MTHFD1-204ENST00000553405 OR5H15A6NDH6 313 aa13.68□□□□□ -0.22
MTHFD1-204ENST00000553405 TTC36A6NLP5 189 aa13.68□□□□□ -0.22
MTHFD1-204ENST00000553405 TSPAN2O60636 221 aa13.68□□□□□ -0.22
MTHFD1-204ENST00000553405 KRT34O76011 436 aa13.68□□□□□ -0.22
MTHFD1-204ENST00000553405 UNC5CO95185 931 aa13.68□□□□□ -0.22
MTHFD1-204ENST00000553405 F10P00742 488 aa13.68□□□□□ -0.22
MTHFD1-204ENST00000553405 IGKV1D-16P01601 117 aa13.68□□□□□ -0.22
MTHFD1-204ENST00000553405 COX4I1P13073 169 aa13.68□□□□□ -0.22
MTHFD1-204ENST00000553405 SOAT1P35610 550 aa13.68□□□□□ -0.22
MTHFD1-204ENST00000553405 TNFSF10P50591 281 aa13.68□□□□□ -0.22
MTHFD1-204ENST00000553405 SSR4P51571 173 aa13.68□□□□□ -0.22
MTHFD1-204ENST00000553405 PRKAG1P54619 331 aa13.68□□□□□ -0.22
MTHFD1-204ENST00000553405 FUT5Q11128 374 aa13.68□□□□□ -0.22
MTHFD1-204ENST00000553405 MAPK11Q15759 364 aa13.68□□□□□ -0.22
MTHFD1-204ENST00000553405 COX20Q5RI15 118 aa13.68□□□□□ -0.22
MTHFD1-204ENST00000553405 C6orf10Q5SRN2 563 aa13.68□□□□□ -0.22
MTHFD1-204ENST00000553405 AP1ARQ63HQ0 302 aa13.68□□□□□ -0.22
MTHFD1-204ENST00000553405 REP15Q6BDI9 236 aa13.68□□□□□ -0.22
MTHFD1-204ENST00000553405 Q6ZS92 163 aa13.68□□□□□ -0.22
MTHFD1-204ENST00000553405 ZNF621Q6ZSS3 439 aa13.68□□□□□ -0.22
MTHFD1-204ENST00000553405 MTERF4Q7Z6M4 381 aaKnown RBP13.68□□□□□ -0.22
MTHFD1-204ENST00000553405 RP9Q8TA86 221 aaKnown RBP13.68□□□□□ -0.22
MTHFD1-204ENST00000553405 C9orf43Q8TAL5 461 aaPredicted RBP13.68□□□□□ -0.22
MTHFD1-204ENST00000553405 FBXO30Q8TB52 745 aa13.68□□□□□ -0.22
MTHFD1-204ENST00000553405 BCAS4Q8TDM0 211 aa13.68□□□□□ -0.22
MTHFD1-204ENST00000553405 OTUB1Q96FW1 271 aaPredicted RBP13.68□□□□□ -0.22
MTHFD1-204ENST00000553405 SLC35A4Q96G79 324 aa13.68□□□□□ -0.22
MTHFD1-204ENST00000553405 BBC3Q96PG8 261 aaPredicted RBP13.68□□□□□ -0.22
MTHFD1-204ENST00000553405 SIGLEC12Q96PQ1 595 aa13.68□□□□□ -0.22
MTHFD1-204ENST00000553405 STACQ99469 402 aa13.68□□□□□ -0.22
MTHFD1-204ENST00000553405 YIPF4Q9BSR8 244 aa13.68□□□□□ -0.22
MTHFD1-204ENST00000553405 PIGUQ9H490 435 aa13.68□□□□□ -0.22
MTHFD1-204ENST00000553405 TPT1P8Q9HAU6 139 aa13.68□□□□□ -0.22
MTHFD1-204ENST00000553405 DUSP22Q9NRW4 184 aa13.68□□□□□ -0.22
MTHFD1-204ENST00000553405 BBIP1A8MTZ0 92 aa13.67□□□□□ -0.22
MTHFD1-204ENST00000553405 NDUFAB1O14561 156 aa13.67□□□□□ -0.22
MTHFD1-204ENST00000553405 ANGPT2O15123 496 aa13.67□□□□□ -0.22
MTHFD1-204ENST00000553405 ATXN7O15265 892 aaPredicted RBP13.67□□□□□ -0.22
MTHFD1-204ENST00000553405 NAGAP17050 411 aa13.67□□□□□ -0.22
MTHFD1-204ENST00000553405 PRDX6P30041 224 aa13.67□□□□□ -0.22
MTHFD1-204ENST00000553405 PRIM2P49643 509 aa13.67□□□□□ -0.22
MTHFD1-204ENST00000553405 LY6DQ14210 128 aa13.67□□□□□ -0.22
MTHFD1-204ENST00000553405 MAPRE2Q15555 327 aa13.67□□□□□ -0.22
MTHFD1-204ENST00000553405 NTRK2Q16620 822 aa13.67□□□□□ -0.22
MTHFD1-204ENST00000553405 SPDYE7PQ495Y7 208 aa13.67□□□□□ -0.22
MTHFD1-204ENST00000553405 CYP27C1Q4G0S4 372 aa13.67□□□□□ -0.22
MTHFD1-204ENST00000553405 LACTB2Q53H82 288 aaPredicted RBP13.67□□□□□ -0.22
MTHFD1-204ENST00000553405 RUNDC3AQ59EK9 446 aa13.67□□□□□ -0.22
MTHFD1-204ENST00000553405 HLA-DQA1Q5Y7H0 255 aa13.67□□□□□ -0.22
MTHFD1-204ENST00000553405 DESI1Q6ICB0 168 aa13.67□□□□□ -0.22
MTHFD1-204ENST00000553405 HEPHL1Q6MZM0 1159 aa13.67□□□□□ -0.22
MTHFD1-204ENST00000553405 C8orf82Q6P1X6 216 aaPredicted RBP13.67□□□□□ -0.22
MTHFD1-204ENST00000553405 ASB18Q6ZVZ8 466 aa13.67□□□□□ -0.22
MTHFD1-204ENST00000553405 MDGA2Q7Z553 956 aa13.67□□□□□ -0.22
MTHFD1-204ENST00000553405 DHDDSQ86SQ9 333 aa13.67□□□□□ -0.22
MTHFD1-204ENST00000553405 RNF130Q86XS8 419 aa13.67□□□□□ -0.22
MTHFD1-204ENST00000553405 HPS6Q86YV9 775 aa13.67□□□□□ -0.22
MTHFD1-204ENST00000553405 SLC44A2Q8IWA5 706 aaPredicted RBP13.67□□□□□ -0.22
MTHFD1-204ENST00000553405 PRR22Q8IZ63 422 aa13.67□□□□□ -0.22
MTHFD1-204ENST00000553405 SLC34A3Q8N130 599 aa13.67□□□□□ -0.22
MTHFD1-204ENST00000553405 HORMAD2Q8N7B1 307 aa13.67□□□□□ -0.22
MTHFD1-204ENST00000553405 CATSPER1Q8NEC5 780 aa13.67□□□□□ -0.22
MTHFD1-204ENST00000553405 OR5D16Q8NGK9 328 aa13.67□□□□□ -0.22
MTHFD1-204ENST00000553405 SLC22A8Q8TCC7 542 aa13.67□□□□□ -0.22
MTHFD1-204ENST00000553405 PIK3R3Q92569 461 aa13.67□□□□□ -0.22
MTHFD1-204ENST00000553405 HGDQ93099 445 aa13.67□□□□□ -0.22
MTHFD1-204ENST00000553405 TMBIM1Q969X1 311 aa13.67□□□□□ -0.22
MTHFD1-204ENST00000553405 SPACA9Q96E40 222 aaPredicted RBP13.67□□□□□ -0.22
MTHFD1-204ENST00000553405 SLC35G5Q96KT7 338 aa13.67□□□□□ -0.22
MTHFD1-204ENST00000553405 LRRC37BQ96QE4 947 aa13.67□□□□□ -0.22
MTHFD1-204ENST00000553405 CPPED1Q9BRF8 314 aaPredicted RBP13.67□□□□□ -0.22
MTHFD1-204ENST00000553405 ZNF71Q9NQZ8 489 aaPredicted RBP13.67□□□□□ -0.22
MTHFD1-204ENST00000553405 ARL8BQ9NVJ2 186 aa13.67□□□□□ -0.22
MTHFD1-204ENST00000553405 ANKRD10Q9NXR5 420 aa13.67□□□□□ -0.22
MTHFD1-204ENST00000553405 NPFFR2Q9Y5X5 522 aa13.67□□□□□ -0.22
MTHFD1-204ENST00000553405 HMGN4O00479 90 aa13.66□□□□□ -0.22
MTHFD1-204ENST00000553405 ASNA1O43681 348 aa13.66□□□□□ -0.22
MTHFD1-204ENST00000553405 PPM1BO75688 479 aa13.66□□□□□ -0.22
MTHFD1-204ENST00000553405 DCTN3O75935 186 aa13.66□□□□□ -0.22
MTHFD1-204ENST00000553405 KCNH1O95259 989 aa13.66□□□□□ -0.22
MTHFD1-204ENST00000553405 ZIC2O95409 532 aaPredicted RBP13.66□□□□□ -0.22
MTHFD1-204ENST00000553405 BMP2P12643 396 aa13.66□□□□□ -0.22
MTHFD1-204ENST00000553405 GABRA3P34903 492 aa13.66□□□□□ -0.22
MTHFD1-204ENST00000553405 PIGAP37287 484 aa13.66□□□□□ -0.22
MTHFD1-204ENST00000553405 MAGEA8P43361 318 aa13.66□□□□□ -0.22
MTHFD1-204ENST00000553405 CASP9P55211 416 aa13.66□□□□□ -0.22
MTHFD1-204ENST00000553405 PSPHP78330 225 aa13.66□□□□□ -0.22
MTHFD1-204ENST00000553405 CYLC2Q14093 348 aaPredicted RBP13.66□□□□□ -0.22
MTHFD1-204ENST00000553405 SELPLGQ14242 412 aa13.66□□□□□ -0.22
MTHFD1-204ENST00000553405 OR1C1Q15619 314 aa13.66□□□□□ -0.22
MTHFD1-204ENST00000553405 TRMT5Q32P41 509 aaKnown RBP13.66□□□□□ -0.22
MTHFD1-204ENST00000553405 BHLHB9Q6PI77 547 aa13.66□□□□□ -0.22
MTHFD1-204ENST00000553405 OPN5Q6U736 354 aa13.66□□□□□ -0.22
MTHFD1-204ENST00000553405 SZRD1Q7Z422 152 aa13.66□□□□□ -0.22
MTHFD1-204ENST00000553405 ZAR1Q86SH2 424 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms