RNA–Protein interactions for RNA: ENST00000553071.1

ITGA5-213, Transcript of integrin subunit alpha 5, humanhuman

TSL 1 (best)

Gene ITGA5, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA5-213ENST00000553071 FCRLBQ6BAA4 426 aa15.9■□□□□ 0.14
ITGA5-213ENST00000553071 SLC34A3Q8N130 599 aa15.9■□□□□ 0.14
ITGA5-213ENST00000553071 BEST3Q8N1M1 668 aa15.9■□□□□ 0.14
ITGA5-213ENST00000553071 LSM14AQ8ND56 463 aaKnown RBP15.9■□□□□ 0.14
ITGA5-213ENST00000553071 SIMC1Q8NDZ2 872 aa15.9■□□□□ 0.14
ITGA5-213ENST00000553071 TMEM125Q96AQ2 219 aa15.9■□□□□ 0.14
ITGA5-213ENST00000553071 HOPXQ9BPY8 73 aaPredicted RBP15.9■□□□□ 0.14
ITGA5-213ENST00000553071 G6PC3Q9BUM1 346 aa15.9■□□□□ 0.14
ITGA5-213ENST00000553071 HPF1Q9NWY4 346 aa15.9■□□□□ 0.14
ITGA5-213ENST00000553071 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.9■□□□□ 0.14
ITGA5-213ENST00000553071 TAGLN3Q9UI15 199 aa15.9■□□□□ 0.14
ITGA5-213ENST00000553071 CBLCQ9ULV8 474 aa15.9■□□□□ 0.14
ITGA5-213ENST00000553071 LIPT1Q9Y234 373 aa15.9■□□□□ 0.14
ITGA5-213ENST00000553071 MED13Q9UHV7 2174 aa15.89■□□□□ 0.13
ITGA5-213ENST00000553071 C15orf38-AP3S2A0A0A6YYH1 394 aa15.89■□□□□ 0.13
ITGA5-213ENST00000553071 OR5H15A6NDH6 313 aa15.89■□□□□ 0.13
ITGA5-213ENST00000553071 TMEM247A6NEH6 219 aa15.89■□□□□ 0.13
ITGA5-213ENST00000553071 FBP2O00757 339 aa15.89■□□□□ 0.13
ITGA5-213ENST00000553071 HS6ST1O60243 411 aa15.89■□□□□ 0.13
ITGA5-213ENST00000553071 FBXO45P0C2W1 286 aa15.89■□□□□ 0.13
ITGA5-213ENST00000553071 PTPN6P29350 595 aa15.89■□□□□ 0.13
ITGA5-213ENST00000553071 PLCXD2Q0VAA5 305 aa15.89■□□□□ 0.13
ITGA5-213ENST00000553071 GAB1Q13480 694 aa15.89■□□□□ 0.13
ITGA5-213ENST00000553071 EFR3AQ14156 821 aa15.89■□□□□ 0.13
ITGA5-213ENST00000553071 GNA13Q14344 377 aa15.89■□□□□ 0.13
ITGA5-213ENST00000553071 EXOSC6Q5RKV6 272 aaKnown RBP15.89■□□□□ 0.13
ITGA5-213ENST00000553071 REP15Q6BDI9 236 aa15.89■□□□□ 0.13
ITGA5-213ENST00000553071 DLEU7Q6UYE1 221 aa15.89■□□□□ 0.13
ITGA5-213ENST00000553071 HACD2Q6Y1H2 254 aa15.89■□□□□ 0.13
ITGA5-213ENST00000553071 DNAJC14Q6Y2X3 702 aaPredicted RBP15.89■□□□□ 0.13
ITGA5-213ENST00000553071 TRPM8Q7Z2W7 1104 aa15.89■□□□□ 0.13
ITGA5-213ENST00000553071 NUP54Q7Z3B4 507 aa15.89■□□□□ 0.13
ITGA5-213ENST00000553071 ARPINQ7Z6K5 226 aa15.89■□□□□ 0.13
ITGA5-213ENST00000553071 RETREG3Q86VR2 466 aa15.89■□□□□ 0.13
ITGA5-213ENST00000553071 TREML1Q86YW5 311 aa15.89■□□□□ 0.13
ITGA5-213ENST00000553071 FITM2Q8N6M3 262 aa15.89■□□□□ 0.13
ITGA5-213ENST00000553071 COX18Q8N8Q8 333 aa15.89■□□□□ 0.13
ITGA5-213ENST00000553071 GOLM1Q8NBJ4 401 aa15.89■□□□□ 0.13
ITGA5-213ENST00000553071 SLC16A11Q8NCK7 471 aa15.89■□□□□ 0.13
ITGA5-213ENST00000553071 OR52N2Q8NGI0 321 aa15.89■□□□□ 0.13
ITGA5-213ENST00000553071 LRRC58Q96CX6 371 aa15.89■□□□□ 0.13
ITGA5-213ENST00000553071 C16orf58Q96GQ5 468 aa15.89■□□□□ 0.13
ITGA5-213ENST00000553071 CRELD1Q96HD1 420 aa15.89■□□□□ 0.13
ITGA5-213ENST00000553071 SECISBP2Q96T21 854 aaKnown RBP15.89■□□□□ 0.13
ITGA5-213ENST00000553071 CGREF1Q99674 301 aa15.89■□□□□ 0.13
ITGA5-213ENST00000553071 BTBD2Q9BX70 525 aa15.89■□□□□ 0.13
ITGA5-213ENST00000553071 HHATLQ9HCP6 504 aa15.89■□□□□ 0.13
ITGA5-213ENST00000553071 NDE1Q9NXR1 346 aa15.89■□□□□ 0.13
ITGA5-213ENST00000553071 MAP10Q9P2G4 905 aa15.89■□□□□ 0.13
ITGA5-213ENST00000553071 DTX4Q9Y2E6 619 aa15.89■□□□□ 0.13
ITGA5-213ENST00000553071 CELSR3Q9NYQ7 3312 aa15.89■□□□□ 0.13
ITGA5-213ENST00000553071 PCSK5Q92824 1860 aa15.88■□□□□ 0.13
ITGA5-213ENST00000553071 REM1O75628 298 aa15.88■□□□□ 0.13
ITGA5-213ENST00000553071 WDPCPO95876 746 aa15.88■□□□□ 0.13
ITGA5-213ENST00000553071 ABCD3P28288 659 aa15.88■□□□□ 0.13
ITGA5-213ENST00000553071 IL12BP29460 328 aa15.88■□□□□ 0.13
ITGA5-213ENST00000553071 PIGAP37287 484 aa15.88■□□□□ 0.13
ITGA5-213ENST00000553071 CRATP43155 626 aa15.88■□□□□ 0.13
ITGA5-213ENST00000553071 PNLIPRP2P54317 469 aa15.88■□□□□ 0.13
ITGA5-213ENST00000553071 POU6F2P78424 691 aaPredicted RBP15.88■□□□□ 0.13
ITGA5-213ENST00000553071 LACTB2Q53H82 288 aaPredicted RBP15.88■□□□□ 0.13
ITGA5-213ENST00000553071 RUNDC3AQ59EK9 446 aa15.88■□□□□ 0.13
ITGA5-213ENST00000553071 RTL4Q6ZR62 310 aa15.88■□□□□ 0.13
ITGA5-213ENST00000553071 ASB18Q6ZVZ8 466 aa15.88■□□□□ 0.13
ITGA5-213ENST00000553071 RNF130Q86XS8 419 aa15.88■□□□□ 0.13
ITGA5-213ENST00000553071 OR8J3Q8NGG0 315 aa15.88■□□□□ 0.13
ITGA5-213ENST00000553071 TMCO6Q96DC7 493 aa15.88■□□□□ 0.13
ITGA5-213ENST00000553071 SPACA9Q96E40 222 aaPredicted RBP15.88■□□□□ 0.13
ITGA5-213ENST00000553071 NSL1Q96IY1 281 aa15.88■□□□□ 0.13
ITGA5-213ENST00000553071 ANKRD27Q96NW4 1050 aa15.88■□□□□ 0.13
ITGA5-213ENST00000553071 OR7D2Q96RA2 312 aa15.88■□□□□ 0.13
ITGA5-213ENST00000553071 NPAS2Q99743 824 aa15.88■□□□□ 0.13
ITGA5-213ENST00000553071 THUMPD3Q9BV44 507 aaKnown RBP15.88■□□□□ 0.13
ITGA5-213ENST00000553071 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.88■□□□□ 0.136e-7■■■□□ 15
ITGA5-213ENST00000553071 LIN28AQ9H9Z2 209 aaKnown RBP15.88■□□□□ 0.13
ITGA5-213ENST00000553071 TIMMDC1Q9NPL8 285 aa15.88■□□□□ 0.13
ITGA5-213ENST00000553071 VAPAQ9P0L0 249 aa15.88■□□□□ 0.13
ITGA5-213ENST00000553071 LRFN1Q9P244 771 aa15.88■□□□□ 0.13
ITGA5-213ENST00000553071 PCDHGB6Q9Y5F9 930 aa15.88■□□□□ 0.13
ITGA5-213ENST00000553071 NUP214P35658 2090 aaPredicted RBP15.88■□□□□ 0.13
ITGA5-213ENST00000553071 PKD1L2Q7Z442 2459 aa15.87■□□□□ 0.13
ITGA5-213ENST00000553071 TRBV5-3A0A0A0MS03 114 aa15.87■□□□□ 0.13
ITGA5-213ENST00000553071 TRAV17A0A0B4J275 112 aa15.87■□□□□ 0.13
ITGA5-213ENST00000553071 OR6C70A6NIJ9 312 aa15.87■□□□□ 0.13
ITGA5-213ENST00000553071 AIM2O14862 343 aa15.87■□□□□ 0.13
ITGA5-213ENST00000553071 PPM1BO75688 479 aa15.87■□□□□ 0.13
ITGA5-213ENST00000553071 NADKO95544 446 aaPredicted RBP15.87■□□□□ 0.13
ITGA5-213ENST00000553071 GUSBP08236 651 aa15.87■□□□□ 0.13
ITGA5-213ENST00000553071 FAM87AP0C7U9 286 aa15.87■□□□□ 0.13
ITGA5-213ENST00000553071 ACP2P11117 423 aa15.87■□□□□ 0.13
ITGA5-213ENST00000553071 ESRRAP11474 423 aaPredicted RBP15.87■□□□□ 0.13
ITGA5-213ENST00000553071 CD46P15529 392 aa15.87■□□□□ 0.13
ITGA5-213ENST00000553071 GPX2P18283 190 aa15.87■□□□□ 0.13
ITGA5-213ENST00000553071 ATP6V1C1P21283 382 aa15.87■□□□□ 0.13
ITGA5-213ENST00000553071 CD96P40200 585 aa15.87■□□□□ 0.13
ITGA5-213ENST00000553071 MAN2A2P49641 1150 aa15.87■□□□□ 0.13
ITGA5-213ENST00000553071 CORO7P57737 925 aa15.87■□□□□ 0.13
ITGA5-213ENST00000553071 TUBA3CQ13748 450 aa15.87■□□□□ 0.13
ITGA5-213ENST00000553071 NTRK2Q16620 822 aa15.87■□□□□ 0.13
ITGA5-213ENST00000553071 DUSP5Q16690 384 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms