RNA–Protein interactions for RNA: ENST00000551305.5

TMEM106C-216, Transcript of transmembrane protein 106C, humanhuman

TSL 1 (best)

Gene TMEM106C, Length 1,356 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-216ENST00000551305 TMCO6Q96DC7 493 aa13.41□□□□□ -0.26
TMEM106C-216ENST00000551305 STARD4Q96DR4 205 aa13.41□□□□□ -0.26
TMEM106C-216ENST00000551305 CNRIP1Q96F85 164 aaPredicted RBP13.41□□□□□ -0.26
TMEM106C-216ENST00000551305 PIK3IP1Q96FE7 263 aa13.41□□□□□ -0.26
TMEM106C-216ENST00000551305 ZNF681Q96N22 645 aa13.41□□□□□ -0.26
TMEM106C-216ENST00000551305 COL21A1Q96P44 957 aa13.41□□□□□ -0.26
TMEM106C-216ENST00000551305 ADOQ96SZ5 270 aa13.41□□□□□ -0.26
TMEM106C-216ENST00000551305 MDFIQ99750 246 aa13.41□□□□□ -0.26
TMEM106C-216ENST00000551305 PRODH2Q9UF12 536 aa13.41□□□□□ -0.26
TMEM106C-216ENST00000551305 PCTPQ9UKL6 214 aa13.41□□□□□ -0.26
TMEM106C-216ENST00000551305 GPR55Q9Y2T6 319 aaPredicted RBP13.41□□□□□ -0.26
TMEM106C-216ENST00000551305 FN1P02751 2386 aaKnown RBP13.41□□□□□ -0.26
TMEM106C-216ENST00000551305 FRG2CA6NGY1 282 aa13.4□□□□□ -0.26
TMEM106C-216ENST00000551305 OR6C70A6NIJ9 312 aa13.4□□□□□ -0.26
TMEM106C-216ENST00000551305 CTIFO43310 598 aaKnown RBP13.4□□□□□ -0.26
TMEM106C-216ENST00000551305 CHMP24386 653 aa13.4□□□□□ -0.26
TMEM106C-216ENST00000551305 CORO7P57737 925 aa13.4□□□□□ -0.26
TMEM106C-216ENST00000551305 METTL2BQ6P1Q9 378 aaKnown RBP13.4□□□□□ -0.26
TMEM106C-216ENST00000551305 AAGABQ6PD74 315 aa13.4□□□□□ -0.26
TMEM106C-216ENST00000551305 ZNF474Q6S9Z5 364 aaPredicted RBP13.4□□□□□ -0.26
TMEM106C-216ENST00000551305 P4HA3Q7Z4N8 544 aa13.4□□□□□ -0.26
TMEM106C-216ENST00000551305 BTLAQ7Z6A9 289 aa13.4□□□□□ -0.26
TMEM106C-216ENST00000551305 CCDC116Q8IYX3 515 aa13.4□□□□□ -0.26
TMEM106C-216ENST00000551305 CNEP1R1Q8N9A8 125 aa13.4□□□□□ -0.26
TMEM106C-216ENST00000551305 COX4I2Q96KJ9 171 aa13.4□□□□□ -0.26
TMEM106C-216ENST00000551305 FAM111AQ96PZ2 611 aa13.4□□□□□ -0.26
TMEM106C-216ENST00000551305 PIP5K1AQ99755 562 aa13.4□□□□□ -0.26
TMEM106C-216ENST00000551305 OPN3Q9H1Y3 402 aaPredicted RBP13.4□□□□□ -0.26
TMEM106C-216ENST00000551305 ACBD3Q9H3P7 528 aa13.4□□□□□ -0.26
TMEM106C-216ENST00000551305 ELOVL6Q9H5J4 265 aa13.4□□□□□ -0.26
TMEM106C-216ENST00000551305 UBTD1Q9HAC8 227 aa13.4□□□□□ -0.26
TMEM106C-216ENST00000551305 HEY2Q9UBP5 337 aa13.4□□□□□ -0.26
TMEM106C-216ENST00000551305 DKKL1Q9UK85 242 aa13.4□□□□□ -0.26
TMEM106C-216ENST00000551305 UTP11Q9Y3A2 253 aaKnown RBP13.4□□□□□ -0.26
TMEM106C-216ENST00000551305 TRIM64A6NGJ6 449 aa13.39□□□□□ -0.27
TMEM106C-216ENST00000551305 TRIM64BA6NI03 449 aa13.39□□□□□ -0.27
TMEM106C-216ENST00000551305 MSTNO14793 375 aa13.39□□□□□ -0.27
TMEM106C-216ENST00000551305 HCRTR2O43614 444 aa13.39□□□□□ -0.27
TMEM106C-216ENST00000551305 TSPAN2O60636 221 aa13.39□□□□□ -0.27
TMEM106C-216ENST00000551305 GUCY1B2O75343 617 aa13.39□□□□□ -0.27
TMEM106C-216ENST00000551305 CTAGE8P0CG41 777 aa13.39□□□□□ -0.27
TMEM106C-216ENST00000551305 SERPINB8P50452 374 aa13.39□□□□□ -0.27
TMEM106C-216ENST00000551305 CDH13P55290 713 aa13.39□□□□□ -0.27
TMEM106C-216ENST00000551305 CLDN15P56746 228 aa13.39□□□□□ -0.27
TMEM106C-216ENST00000551305 B3GALT5-AS1P59052 145 aa13.39□□□□□ -0.27
TMEM106C-216ENST00000551305 CAV1Q03135 178 aa13.39□□□□□ -0.27
TMEM106C-216ENST00000551305 ACKR1Q16570 336 aa13.39□□□□□ -0.27
TMEM106C-216ENST00000551305 ZNF628Q5EBL2 1059 aa13.39□□□□□ -0.27
TMEM106C-216ENST00000551305 ZNF550Q7Z398 422 aa13.39□□□□□ -0.27
TMEM106C-216ENST00000551305 YTHDF3Q7Z739 585 aaKnown RBP13.39□□□□□ -0.27
TMEM106C-216ENST00000551305 CTAGE4Q8IX94 777 aa13.39□□□□□ -0.27
TMEM106C-216ENST00000551305 UBQLNLQ8IYU4 475 aa13.39□□□□□ -0.27
TMEM106C-216ENST00000551305 LRRC75A-AS1Q8N1F1 130 aa13.39□□□□□ -0.27
TMEM106C-216ENST00000551305 SELENOMQ8WWX9 145 aa13.39□□□□□ -0.27
TMEM106C-216ENST00000551305 KAT2AQ92830 837 aa13.39□□□□□ -0.27
TMEM106C-216ENST00000551305 PIGTQ969N2 578 aa13.39□□□□□ -0.27
TMEM106C-216ENST00000551305 PERPQ96FX8 193 aa13.39□□□□□ -0.27
TMEM106C-216ENST00000551305 SLC35A4Q96G79 324 aa13.39□□□□□ -0.27
TMEM106C-216ENST00000551305 HS3ST6Q96QI5 342 aa13.39□□□□□ -0.27
TMEM106C-216ENST00000551305 HBEGFQ99075 208 aa13.39□□□□□ -0.27
TMEM106C-216ENST00000551305 PIGQQ9BRB3 760 aa13.39□□□□□ -0.27
TMEM106C-216ENST00000551305 UTS2RQ9UKP6 389 aa13.39□□□□□ -0.27
TMEM106C-216ENST00000551305 PSME2Q9UL46 239 aa13.39□□□□□ -0.27
TMEM106C-216ENST00000551305 PYCARDQ9ULZ3 195 aa13.39□□□□□ -0.27
TMEM106C-216ENST00000551305 DLGAP4Q9Y2H0 992 aa13.39□□□□□ -0.27
TMEM106C-216ENST00000551305 ZNF780BQ9Y6R6 833 aa13.39□□□□□ -0.27
TMEM106C-216ENST00000551305 FAM171A2A8MVW0 826 aa13.38□□□□□ -0.27
TMEM106C-216ENST00000551305 H0YC42 278 aa13.38□□□□□ -0.27
TMEM106C-216ENST00000551305 STX16-NPEPL1H3BU86 382 aa13.38□□□□□ -0.27
TMEM106C-216ENST00000551305 STX16O14662 325 aa13.38□□□□□ -0.27
TMEM106C-216ENST00000551305 CT45A8P0DMV1 189 aa13.38□□□□□ -0.27
TMEM106C-216ENST00000551305 CT45A9P0DMV2 189 aa13.38□□□□□ -0.27
TMEM106C-216ENST00000551305 GRK2P25098 689 aa13.38□□□□□ -0.27
TMEM106C-216ENST00000551305 DPP4P27487 766 aa13.38□□□□□ -0.27
TMEM106C-216ENST00000551305 CD79BP40259 229 aa13.38□□□□□ -0.27
TMEM106C-216ENST00000551305 MC3RP41968 323 aa13.38□□□□□ -0.27
TMEM106C-216ENST00000551305 KIR2DL2P43627 348 aaPredicted RBP13.38□□□□□ -0.27
TMEM106C-216ENST00000551305 GAS1P54826 345 aa13.38□□□□□ -0.27
TMEM106C-216ENST00000551305 TPD52P55327 224 aaPredicted RBP13.38□□□□□ -0.27
TMEM106C-216ENST00000551305 EEF1A1P68104 462 aaKnown RBP13.38□□□□□ -0.27
TMEM106C-216ENST00000551305 SIRPAP78324 504 aa13.38□□□□□ -0.27
TMEM106C-216ENST00000551305 GGTA1PQ4G0N0 100 aa13.38□□□□□ -0.27
TMEM106C-216ENST00000551305 CT45A2Q5DJT8 189 aa13.38□□□□□ -0.27
TMEM106C-216ENST00000551305 EEF1A1P5Q5VTE0 462 aa13.38□□□□□ -0.27
TMEM106C-216ENST00000551305 LETMD1Q6P1Q0 360 aa13.38□□□□□ -0.27
TMEM106C-216ENST00000551305 NPSR1Q6W5P4 371 aa13.38□□□□□ -0.27
TMEM106C-216ENST00000551305 C22orf34Q6ZV56 151 aa13.38□□□□□ -0.27
TMEM106C-216ENST00000551305 C1orf52Q8N6N3 182 aaKnown RBP13.38□□□□□ -0.27
TMEM106C-216ENST00000551305 OR4N2Q8NGD1 307 aa13.38□□□□□ -0.27
TMEM106C-216ENST00000551305 OR9A2Q8NGT5 310 aa13.38□□□□□ -0.27
TMEM106C-216ENST00000551305 FIG4Q92562 907 aa13.38□□□□□ -0.27
TMEM106C-216ENST00000551305 PGM2Q96G03 612 aa13.38□□□□□ -0.27
TMEM106C-216ENST00000551305 ZC3HAV1LQ96H79 300 aaKnown RBP13.38□□□□□ -0.27
TMEM106C-216ENST00000551305 CCL19Q99731 98 aa13.38□□□□□ -0.27
TMEM106C-216ENST00000551305 LRRC1Q9BTT6 524 aa13.38□□□□□ -0.27
TMEM106C-216ENST00000551305 PFDN4Q9NQP4 134 aa13.38□□□□□ -0.27
TMEM106C-216ENST00000551305 XPR1Q9UBH6 696 aa13.38□□□□□ -0.27
TMEM106C-216ENST00000551305 MRPS18CQ9Y3D5 142 aaKnown RBP13.38□□□□□ -0.27
TMEM106C-216ENST00000551305 ESYT3A0FGR9 886 aa13.37□□□□□ -0.27
TMEM106C-216ENST00000551305 SLC22A20A6NK97 555 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms