RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 RBBP4Q09028 425 aa11.52□□□□□ -0.56
NR4A1-215ENST00000550557 KIAA0907Q7Z7F0 614 aaPredicted RBP11.52□□□□□ -0.56
NR4A1-215ENST00000550557 PNLDC1Q8NA58 520 aaKnown RBP11.52□□□□□ -0.56
NR4A1-215ENST00000550557 FRS2Q8WU20 508 aa11.52□□□□□ -0.56
NR4A1-215ENST00000550557 HSH2DQ96JZ2 352 aa11.52□□□□□ -0.56
NR4A1-215ENST00000550557 TSSK6Q9BXA6 273 aa11.52□□□□□ -0.56
NR4A1-215ENST00000550557 ACTRT3Q9BYD9 372 aa11.52□□□□□ -0.56
NR4A1-215ENST00000550557 TOR3AQ9H497 397 aa11.52□□□□□ -0.56
NR4A1-215ENST00000550557 VDAC3Q9Y277 283 aa11.52□□□□□ -0.56
NR4A1-215ENST00000550557 GRXCR2A6NFK2 248 aa11.52□□□□□ -0.57
NR4A1-215ENST00000550557 MKRN2OSH3BPM6 223 aa11.52□□□□□ -0.57
NR4A1-215ENST00000550557 SLC30A4O14863 429 aa11.52□□□□□ -0.57
NR4A1-215ENST00000550557 CREG1O75629 220 aa11.52□□□□□ -0.57
NR4A1-215ENST00000550557 ZNF182P17025 639 aaPredicted RBP11.52□□□□□ -0.57
NR4A1-215ENST00000550557 POU3F2P20265 443 aaPredicted RBP11.52□□□□□ -0.57
NR4A1-215ENST00000550557 PGFP49763 221 aa11.52□□□□□ -0.57
NR4A1-215ENST00000550557 BLOC1S3Q6QNY0 202 aa11.52□□□□□ -0.57
NR4A1-215ENST00000550557 HMGN2P46Q86SG4 172 aa11.52□□□□□ -0.57
NR4A1-215ENST00000550557 CLCC1Q96S66 551 aa11.52□□□□□ -0.57
NR4A1-215ENST00000550557 GDF15Q99988 308 aa11.52□□□□□ -0.57
NR4A1-215ENST00000550557 TMEM30AQ9NV96 361 aa11.52□□□□□ -0.57
NR4A1-215ENST00000550557 LOC100130705A0A1B0GUX0 176 aa11.52□□□□□ -0.57
NR4A1-215ENST00000550557 CH25HO95992 272 aa11.52□□□□□ -0.57
NR4A1-215ENST00000550557 HIST1H1TP22492 207 aaPredicted RBP11.52□□□□□ -0.57
NR4A1-215ENST00000550557 TXNL4AP83876 142 aaKnown RBP11.52□□□□□ -0.57
NR4A1-215ENST00000550557 MAT1AQ00266 395 aaKnown RBP11.52□□□□□ -0.57
NR4A1-215ENST00000550557 SMAD2Q15796 467 aaKnown RBP11.52□□□□□ -0.57
NR4A1-215ENST00000550557 KLHL22Q53GT1 634 aa11.52□□□□□ -0.57
NR4A1-215ENST00000550557 NANOGP8Q6NSW7 305 aa11.52□□□□□ -0.57
NR4A1-215ENST00000550557 PAPD4Q6PIY7 484 aaKnown RBP11.52□□□□□ -0.57
NR4A1-215ENST00000550557 SPATC1Q76KD6 591 aa11.52□□□□□ -0.57
NR4A1-215ENST00000550557 GAB3Q8WWW8 586 aa11.52□□□□□ -0.57
NR4A1-215ENST00000550557 STON2Q8WXE9 905 aa11.52□□□□□ -0.57
NR4A1-215ENST00000550557 TMIGD2Q96BF3 282 aa11.52□□□□□ -0.57
NR4A1-215ENST00000550557 MUS81Q96NY9 551 aa11.52□□□□□ -0.57
NR4A1-215ENST00000550557 MS4A4EQ96PG1 132 aa11.52□□□□□ -0.57
NR4A1-215ENST00000550557 NANOGQ9H9S0 305 aa11.52□□□□□ -0.57
NR4A1-215ENST00000550557 SPHK1Q9NYA1 384 aa11.52□□□□□ -0.57
NR4A1-215ENST00000550557 EIF3KQ9UBQ5 218 aaKnown RBP11.52□□□□□ -0.57
NR4A1-215ENST00000550557 ZNF222Q9UK12 451 aa11.52□□□□□ -0.57
NR4A1-215ENST00000550557 MCM3APO60318 1980 aa11.52□□□□□ -0.57
NR4A1-215ENST00000550557 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.52□□□□□ -0.57
NR4A1-215ENST00000550557 SCAMP2O15127 329 aaKnown RBP11.52□□□□□ -0.57
NR4A1-215ENST00000550557 RFPL3O75679 317 aa11.52□□□□□ -0.57
NR4A1-215ENST00000550557 IFNA6P05013 189 aa11.52□□□□□ -0.57
NR4A1-215ENST00000550557 SMSP52788 366 aa11.52□□□□□ -0.57
NR4A1-215ENST00000550557 CLDN8P56748 225 aa11.52□□□□□ -0.57
NR4A1-215ENST00000550557 ERVPABLB-1P60509 514 aa11.52□□□□□ -0.57
NR4A1-215ENST00000550557 MEP1AQ16819 746 aa11.52□□□□□ -0.57
NR4A1-215ENST00000550557 OR2T5Q6IEZ7 315 aa11.52□□□□□ -0.57
NR4A1-215ENST00000550557 LCN8Q6JVE9 175 aa11.52□□□□□ -0.57
NR4A1-215ENST00000550557 CARM1Q86X55 608 aa11.52□□□□□ -0.57
NR4A1-215ENST00000550557 ETFBKMTQ8IXQ9 262 aa11.52□□□□□ -0.57
NR4A1-215ENST00000550557 OR2T29Q8NH02 315 aa11.52□□□□□ -0.57
NR4A1-215ENST00000550557 DDIT4LQ96D03 193 aa11.52□□□□□ -0.57
NR4A1-215ENST00000550557 ZNF597Q96LX8 424 aa11.52□□□□□ -0.57
NR4A1-215ENST00000550557 FRMD6Q96NE9 622 aa11.52□□□□□ -0.57
NR4A1-215ENST00000550557 ALPK1Q96QP1 1244 aa11.52□□□□□ -0.57
NR4A1-215ENST00000550557 EHD1Q9H4M9 534 aa11.52□□□□□ -0.57
NR4A1-215ENST00000550557 EPHX3Q9H6B9 360 aa11.52□□□□□ -0.57
NR4A1-215ENST00000550557 ARMC1Q9NVT9 282 aa11.52□□□□□ -0.57
NR4A1-215ENST00000550557 CAMK2AQ9UQM7 478 aa11.52□□□□□ -0.57
NR4A1-215ENST00000550557 RBMX2Q9Y388 322 aaKnown RBP11.52□□□□□ -0.57
NR4A1-215ENST00000550557 CEPT1Q9Y6K0 416 aa11.52□□□□□ -0.57
NR4A1-215ENST00000550557 A0A096LPI6 279 aa11.51□□□□□ -0.57
NR4A1-215ENST00000550557 ANXA2P2A6NMY6 339 aa11.51□□□□□ -0.57
NR4A1-215ENST00000550557 ANXA2P07355 339 aaKnown RBP11.51□□□□□ -0.57
NR4A1-215ENST00000550557 TFPTP0C1Z6 253 aa11.51□□□□□ -0.57
NR4A1-215ENST00000550557 GBX2P52951 348 aaPredicted RBP11.51□□□□□ -0.57
NR4A1-215ENST00000550557 GPR19Q15760 415 aa11.51□□□□□ -0.57
NR4A1-215ENST00000550557 FAM180BQ6P0A1 224 aa11.51□□□□□ -0.57
NR4A1-215ENST00000550557 METTL2BQ6P1Q9 378 aaKnown RBP11.51□□□□□ -0.57
NR4A1-215ENST00000550557 BORAQ6PGQ7 559 aa11.51□□□□□ -0.57
NR4A1-215ENST00000550557 ARL9Q6T311 187 aa11.51□□□□□ -0.57
NR4A1-215ENST00000550557 ZNF595Q8IYB9 648 aa11.51□□□□□ -0.57
NR4A1-215ENST00000550557 ZNF283Q8N7M2 679 aa11.51□□□□□ -0.57
NR4A1-215ENST00000550557 CADM4Q8NFZ8 388 aa11.51□□□□□ -0.57
NR4A1-215ENST00000550557 SETD6Q8TBK2 473 aa11.51□□□□□ -0.57
NR4A1-215ENST00000550557 NANOS1Q8WY41 292 aaKnown RBP11.51□□□□□ -0.57
NR4A1-215ENST00000550557 ADOQ96SZ5 270 aa11.51□□□□□ -0.57
NR4A1-215ENST00000550557 BRF2Q9HAW0 419 aa11.51□□□□□ -0.57
NR4A1-215ENST00000550557 TCF7L1Q9HCS4 588 aa11.51□□□□□ -0.57
NR4A1-215ENST00000550557 FAM86C1Q9NVL1 165 aa11.51□□□□□ -0.57
NR4A1-215ENST00000550557 ACSL6Q9UKU0 697 aa11.51□□□□□ -0.57
NR4A1-215ENST00000550557 OR5K3A6NET4 321 aa11.51□□□□□ -0.57
NR4A1-215ENST00000550557 ANTXRLA6NF34 631 aa11.51□□□□□ -0.57
NR4A1-215ENST00000550557 ZNF749O43361 778 aa11.51□□□□□ -0.57
NR4A1-215ENST00000550557 PLRG1O43660 514 aaKnown RBP11.51□□□□□ -0.57
NR4A1-215ENST00000550557 SEMA3DO95025 777 aa11.51□□□□□ -0.57
NR4A1-215ENST00000550557 HSD17B1P14061 328 aa11.51□□□□□ -0.57
NR4A1-215ENST00000550557 ZNF43P17038 809 aa11.51□□□□□ -0.57
NR4A1-215ENST00000550557 DNAJA1P31689 397 aaKnown RBP11.51□□□□□ -0.57
NR4A1-215ENST00000550557 MAP3K8P41279 467 aa11.51□□□□□ -0.57
NR4A1-215ENST00000550557 HTR6P50406 440 aa11.51□□□□□ -0.57
NR4A1-215ENST00000550557 PPP2R2BQ00005 443 aa11.51□□□□□ -0.57
NR4A1-215ENST00000550557 STK11Q15831 433 aa11.51□□□□□ -0.57
NR4A1-215ENST00000550557 EEF1A1P5Q5VTE0 462 aa11.51□□□□□ -0.57
NR4A1-215ENST00000550557 DHRS13Q6UX07 377 aa11.51□□□□□ -0.57
NR4A1-215ENST00000550557 Q6ZNB5 142 aa11.51□□□□□ -0.57
NR4A1-215ENST00000550557 LAPTM4BQ86VI4 370 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms