RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 SEC14L2O76054 403 aa19.57■□□□□ 0.72
PRDM4-205ENST00000550376 CNR2P34972 360 aa19.57■□□□□ 0.72
PRDM4-205ENST00000550376 PRAMEF17Q5VTA0 474 aa19.57■□□□□ 0.72
PRDM4-205ENST00000550376 FRRS1Q6ZNA5 592 aa19.57■□□□□ 0.72
PRDM4-205ENST00000550376 P3H2Q8IVL5 708 aa19.57■□□□□ 0.72
PRDM4-205ENST00000550376 CACTIN-AS1Q8N1I8 211 aa19.57■□□□□ 0.72
PRDM4-205ENST00000550376 ARHGEF39Q8N4T4 335 aa19.57■□□□□ 0.72
PRDM4-205ENST00000550376 OR52P1PQ8NH57 321 aa19.57■□□□□ 0.72
PRDM4-205ENST00000550376 FAR1Q8WVX9 515 aa19.57■□□□□ 0.72
PRDM4-205ENST00000550376 TRNT1Q96Q11 434 aaKnown RBP19.57■□□□□ 0.72
PRDM4-205ENST00000550376 TPRKBQ9Y3C4 175 aa19.57■□□□□ 0.72
PRDM4-205ENST00000550376 TMEM184BQ9Y519 407 aaPredicted RBP19.57■□□□□ 0.72
PRDM4-205ENST00000550376 H3BN98 237 aa19.57■□□□□ 0.72
PRDM4-205ENST00000550376 FOXS1O43638 330 aa19.57■□□□□ 0.72
PRDM4-205ENST00000550376 TNNI3P19429 210 aa19.57■□□□□ 0.72
PRDM4-205ENST00000550376 OR1D5P58170 312 aa19.57■□□□□ 0.72
PRDM4-205ENST00000550376 BTG2P78543 158 aa19.57■□□□□ 0.72
PRDM4-205ENST00000550376 PGBD2Q6P3X8 592 aa19.57■□□□□ 0.72
PRDM4-205ENST00000550376 DNAJC22Q8N4W6 341 aa19.57■□□□□ 0.72
PRDM4-205ENST00000550376 RHOXF1Q8NHV9 184 aa19.57■□□□□ 0.72
PRDM4-205ENST00000550376 ZNF566Q969W8 418 aa19.57■□□□□ 0.72
PRDM4-205ENST00000550376 SPRTNQ9H040 489 aaPredicted RBP19.57■□□□□ 0.72
PRDM4-205ENST00000550376 CHRDQ9H2X0 955 aa19.57■□□□□ 0.72
PRDM4-205ENST00000550376 GPR83Q9NYM4 423 aa19.57■□□□□ 0.72
PRDM4-205ENST00000550376 HSPE1-MOB4S4R3N1 261 aa19.57■□□□□ 0.72
PRDM4-205ENST00000550376 SPACA6W5XKT8 324 aa19.57■□□□□ 0.72
PRDM4-205ENST00000550376 A0A1B0GVT2 93 aa19.56■□□□□ 0.72
PRDM4-205ENST00000550376 PRKNO60260 465 aaPredicted RBP19.56■□□□□ 0.72
PRDM4-205ENST00000550376 JUNBP17275 347 aaPredicted RBP19.56■□□□□ 0.72
PRDM4-205ENST00000550376 DCKP27707 260 aa19.56■□□□□ 0.72
PRDM4-205ENST00000550376 MLLT1Q03111 559 aaPredicted RBP19.56■□□□□ 0.72
PRDM4-205ENST00000550376 RELAQ04206 551 aa19.56■□□□□ 0.72
PRDM4-205ENST00000550376 ZP2Q05996 745 aa19.56■□□□□ 0.72
PRDM4-205ENST00000550376 SLC13A2Q13183 592 aa19.56■□□□□ 0.72
PRDM4-205ENST00000550376 MAPK14Q16539 360 aa19.56■□□□□ 0.72
PRDM4-205ENST00000550376 FHL5Q5TD97 284 aa19.56■□□□□ 0.72
PRDM4-205ENST00000550376 CDC73Q6P1J9 531 aa19.56■□□□□ 0.72
PRDM4-205ENST00000550376 BCDIN3DQ7Z5W3 292 aaKnown RBP19.56■□□□□ 0.72
PRDM4-205ENST00000550376 IQCHQ86VS3 1027 aa19.56■□□□□ 0.72
PRDM4-205ENST00000550376 RBM12BQ8IXT5 1001 aaKnown RBP19.56■□□□□ 0.72
PRDM4-205ENST00000550376 IQCF1Q8N6M8 205 aa19.56■□□□□ 0.72
PRDM4-205ENST00000550376 Q8N9G6 341 aaPredicted RBP19.56■□□□□ 0.72
PRDM4-205ENST00000550376 SPATA5L1Q9BVQ7 753 aa19.56■□□□□ 0.72
PRDM4-205ENST00000550376 REV1Q9UBZ9 1251 aa19.56■□□□□ 0.72
PRDM4-205ENST00000550376 MAU2Q9Y6X3 613 aa19.56■□□□□ 0.72
PRDM4-205ENST00000550376 SH3PXD2BA1X283 911 aa19.56■□□□□ 0.72
PRDM4-205ENST00000550376 CXCL12P48061 93 aa19.56■□□□□ 0.72
PRDM4-205ENST00000550376 CRISP1P54107 249 aa19.56■□□□□ 0.72
PRDM4-205ENST00000550376 HPCAP84074 193 aa19.56■□□□□ 0.72
PRDM4-205ENST00000550376 MGAT2Q10469 447 aa19.56■□□□□ 0.72
PRDM4-205ENST00000550376 PRICKLE4Q2TBC4 344 aa19.56■□□□□ 0.72
PRDM4-205ENST00000550376 ZER1Q7Z7L7 766 aa19.56■□□□□ 0.72
PRDM4-205ENST00000550376 IMPAD1Q9NX62 359 aa19.56■□□□□ 0.72
PRDM4-205ENST00000550376 MAT2BQ9NZL9 334 aa19.56■□□□□ 0.72
PRDM4-205ENST00000550376 ACAD8Q9UKU7 415 aa19.56■□□□□ 0.72
PRDM4-205ENST00000550376 WDR45Q9Y484 360 aa19.56■□□□□ 0.72
PRDM4-205ENST00000550376 RNF215Q9Y6U7 377 aa19.56■□□□□ 0.72
PRDM4-205ENST00000550376 ARID1BQ8NFD5 2236 aaPredicted RBP19.56■□□□□ 0.72
PRDM4-205ENST00000550376 GXYLT2A0PJZ3 443 aa19.55■□□□□ 0.72
PRDM4-205ENST00000550376 HNRNPKP61978 463 aaKnown RBP eCLIP19.55■□□□□ 0.72
PRDM4-205ENST00000550376 GNA13Q14344 377 aa19.55■□□□□ 0.72
PRDM4-205ENST00000550376 TYW3Q6IPR3 259 aaKnown RBP19.55■□□□□ 0.72
PRDM4-205ENST00000550376 OR4K5Q8NGD3 323 aa19.55■□□□□ 0.72
PRDM4-205ENST00000550376 GPR151Q8TDV0 419 aa19.55■□□□□ 0.72
PRDM4-205ENST00000550376 FUNDC2Q9BWH2 189 aa19.55■□□□□ 0.72
PRDM4-205ENST00000550376 UCK2Q9BZX2 261 aa19.55■□□□□ 0.72
PRDM4-205ENST00000550376 TMEM9Q9P0T7 183 aa19.55■□□□□ 0.72
PRDM4-205ENST00000550376 LRIT1Q9P2V4 623 aa19.55■□□□□ 0.72
PRDM4-205ENST00000550376 C19orf53Q9UNZ5 99 aaPredicted RBP19.55■□□□□ 0.72
PRDM4-205ENST00000550376 SIT1Q9Y3P8 196 aa19.55■□□□□ 0.72
PRDM4-205ENST00000550376 LMO7DNF2Z398 122 aa19.55■□□□□ 0.72
PRDM4-205ENST00000550376 K7ESF4 209 aa19.55■□□□□ 0.72
PRDM4-205ENST00000550376 PEX12O00623 359 aa19.55■□□□□ 0.72
PRDM4-205ENST00000550376 LCKP06239 509 aa19.55■□□□□ 0.72
PRDM4-205ENST00000550376 LSM3P62310 102 aaKnown RBP19.55■□□□□ 0.72
PRDM4-205ENST00000550376 ROR2Q01974 943 aaKnown RBP19.55■□□□□ 0.72
PRDM4-205ENST00000550376 PUS10Q3MIT2 529 aaKnown RBP19.55■□□□□ 0.72
PRDM4-205ENST00000550376 HEPHL1Q6MZM0 1159 aa19.55■□□□□ 0.72
PRDM4-205ENST00000550376 ERI1Q8IV48 349 aaKnown RBP19.55■□□□□ 0.72
PRDM4-205ENST00000550376 MUL1Q969V5 352 aa19.55■□□□□ 0.72
PRDM4-205ENST00000550376 SDF2Q99470 211 aa19.55■□□□□ 0.72
PRDM4-205ENST00000550376 FUZQ9BT04 418 aa19.55■□□□□ 0.72
PRDM4-205ENST00000550376 BTBD2Q9BX70 525 aa19.55■□□□□ 0.72
PRDM4-205ENST00000550376 PINK1Q9BXM7 581 aa19.55■□□□□ 0.72
PRDM4-205ENST00000550376 FSCN3Q9NQT6 498 aa19.55■□□□□ 0.72
PRDM4-205ENST00000550376 SEMA4GQ9NTN9 838 aa19.55■□□□□ 0.72
PRDM4-205ENST00000550376 FTSJ1Q9UET6 329 aa19.55■□□□□ 0.72
PRDM4-205ENST00000550376 SLC13A4Q9UKG4 626 aa19.55■□□□□ 0.72
PRDM4-205ENST00000550376 RP1P56715 2156 aa19.55■□□□□ 0.72
PRDM4-205ENST00000550376 RHPN2P1A8MT19 583 aa19.54■□□□□ 0.72
PRDM4-205ENST00000550376 RGS10O43665 173 aa19.54■□□□□ 0.72
PRDM4-205ENST00000550376 OR10H2O60403 315 aa19.54■□□□□ 0.72
PRDM4-205ENST00000550376 PDGFBP01127 241 aaPredicted RBP19.54■□□□□ 0.72
PRDM4-205ENST00000550376 ATP1B1P05026 303 aa19.54■□□□□ 0.72
PRDM4-205ENST00000550376 MMP11P24347 488 aa19.54■□□□□ 0.72
PRDM4-205ENST00000550376 GABRA3P34903 492 aa19.54■□□□□ 0.72
PRDM4-205ENST00000550376 RPS6KA3P51812 740 aa19.54■□□□□ 0.72
PRDM4-205ENST00000550376 NUP107P57740 925 aa19.54■□□□□ 0.72
PRDM4-205ENST00000550376 TAS2R41P59536 307 aa19.54■□□□□ 0.72
PRDM4-205ENST00000550376 PRTGQ2VWP7 1150 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms