RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-208ENST00000550283 CASP3P42574 277 aa10.28□□□□□ -0.76
RAB5B-208ENST00000550283 MAGEA5P43359 124 aa10.28□□□□□ -0.76
RAB5B-208ENST00000550283 ASMTP46597 345 aa10.28□□□□□ -0.76
RAB5B-208ENST00000550283 DGKQP52824 942 aa10.28□□□□□ -0.76
RAB5B-208ENST00000550283 PRKAG1P54619 331 aa10.28□□□□□ -0.76
RAB5B-208ENST00000550283 MANFP55145 182 aaKnown RBP10.28□□□□□ -0.76
RAB5B-208ENST00000550283 C21orf58P58505 322 aa10.28□□□□□ -0.76
RAB5B-208ENST00000550283 ALDH6A1Q02252 535 aaKnown RBP10.28□□□□□ -0.76
RAB5B-208ENST00000550283 GAB1Q13480 694 aa10.28□□□□□ -0.76
RAB5B-208ENST00000550283 PGS1Q32NB8 556 aa10.28□□□□□ -0.76
RAB5B-208ENST00000550283 SPANXN4Q5MJ08 99 aa10.28□□□□□ -0.76
RAB5B-208ENST00000550283 C6orf163Q5TEZ5 329 aa10.28□□□□□ -0.76
RAB5B-208ENST00000550283 C1QL3Q5VWW1 255 aa10.28□□□□□ -0.76
RAB5B-208ENST00000550283 HLA-DQA1Q5Y7H0 255 aa10.28□□□□□ -0.76
RAB5B-208ENST00000550283 ATG16L1Q676U5 607 aa10.28□□□□□ -0.76
RAB5B-208ENST00000550283 OGFOD2Q6N063 350 aa10.28□□□□□ -0.76
RAB5B-208ENST00000550283 GFRALQ6UXV0 394 aa10.28□□□□□ -0.76
RAB5B-208ENST00000550283 OLIG3Q7RTU3 272 aa10.28□□□□□ -0.76
RAB5B-208ENST00000550283 ANKRD46Q86W74 232 aa10.28□□□□□ -0.76
RAB5B-208ENST00000550283 ATCAYQ86WG3 371 aa10.28□□□□□ -0.76
RAB5B-208ENST00000550283 SPPL2CQ8IUH8 684 aa10.28□□□□□ -0.76
RAB5B-208ENST00000550283 FBXW8Q8N3Y1 598 aa10.28□□□□□ -0.76
RAB5B-208ENST00000550283 SLC15A4Q8N697 577 aa10.28□□□□□ -0.76
RAB5B-208ENST00000550283 HORMAD2Q8N7B1 307 aa10.28□□□□□ -0.76
RAB5B-208ENST00000550283 GOLM1Q8NBJ4 401 aa10.28□□□□□ -0.76
RAB5B-208ENST00000550283 C7orf57Q8NEG2 295 aa10.28□□□□□ -0.76
RAB5B-208ENST00000550283 C17orf47Q8NEP4 570 aa10.28□□□□□ -0.76
RAB5B-208ENST00000550283 OR5AK3PQ8NH89 298 aa10.28□□□□□ -0.76
RAB5B-208ENST00000550283 DNAJB8Q8NHS0 232 aa10.28□□□□□ -0.76
RAB5B-208ENST00000550283 BCAS4Q8TDM0 211 aa10.28□□□□□ -0.76
RAB5B-208ENST00000550283 PIK3R3Q92569 461 aa10.28□□□□□ -0.76
RAB5B-208ENST00000550283 HOXB13Q92826 284 aaPredicted RBP10.28□□□□□ -0.76
RAB5B-208ENST00000550283 EFHD2Q96C19 240 aaPredicted RBP10.28□□□□□ -0.76
RAB5B-208ENST00000550283 FAM120BQ96EK7 910 aaKnown RBP10.28□□□□□ -0.76
RAB5B-208ENST00000550283 GPR137Q96N19 417 aa10.28□□□□□ -0.76
RAB5B-208ENST00000550283 RABEP2Q9H5N1 569 aa10.28□□□□□ -0.76
RAB5B-208ENST00000550283 AGPAT4Q9NRZ5 378 aa10.28□□□□□ -0.76
RAB5B-208ENST00000550283 SACM1LQ9NTJ5 587 aa10.28□□□□□ -0.76
RAB5B-208ENST00000550283 DDX18Q9NVP1 670 aaKnown RBP10.28□□□□□ -0.76
RAB5B-208ENST00000550283 NOP53Q9NZM5 478 aaKnown RBP10.28□□□□□ -0.76
RAB5B-208ENST00000550283 NTMQ9P121 344 aa10.28□□□□□ -0.76
RAB5B-208ENST00000550283 EIF3LQ9Y262 564 aaKnown RBP10.28□□□□□ -0.76
RAB5B-208ENST00000550283 USH1CQ9Y6N9 552 aa10.28□□□□□ -0.76
RAB5B-208ENST00000550283 POLEQ07864 2286 aa10.28□□□□□ -0.76
RAB5B-208ENST00000550283 RP1L1Q8IWN7 2480 aaPredicted RBP10.27□□□□□ -0.77
RAB5B-208ENST00000550283 A0A1W2PRB8 838 aa10.27□□□□□ -0.77
RAB5B-208ENST00000550283 NDUFAB1O14561 156 aa10.27□□□□□ -0.77
RAB5B-208ENST00000550283 ASNA1O43681 348 aa10.27□□□□□ -0.77
RAB5B-208ENST00000550283 CRYABP02511 175 aaKnown RBP10.27□□□□□ -0.77
RAB5B-208ENST00000550283 CYP4B1P13584 511 aa10.27□□□□□ -0.77
RAB5B-208ENST00000550283 PRPS1L1P21108 318 aa10.27□□□□□ -0.77
RAB5B-208ENST00000550283 ENDOUP21128 410 aaKnown RBP10.27□□□□□ -0.77
RAB5B-208ENST00000550283 MAPK1P28482 360 aa10.27□□□□□ -0.77
RAB5B-208ENST00000550283 HPCAL1P37235 193 aa10.27□□□□□ -0.77
RAB5B-208ENST00000550283 IDH3AP50213 366 aa10.27□□□□□ -0.77
RAB5B-208ENST00000550283 CASP9P55211 416 aa10.27□□□□□ -0.77
RAB5B-208ENST00000550283 RPS26P62854 115 aaKnown RBP10.27□□□□□ -0.77
RAB5B-208ENST00000550283 PPIAP62937 165 aaKnown RBP10.27□□□□□ -0.77
RAB5B-208ENST00000550283 HBA1P69905 142 aa10.27□□□□□ -0.77
RAB5B-208ENST00000550283 PLCXD2Q0VAA5 305 aa10.27□□□□□ -0.77
RAB5B-208ENST00000550283 RPS6KA2Q15349 733 aa10.27□□□□□ -0.77
RAB5B-208ENST00000550283 C3AR1Q16581 482 aa10.27□□□□□ -0.77
RAB5B-208ENST00000550283 DUSP5Q16690 384 aa10.27□□□□□ -0.77
RAB5B-208ENST00000550283 SMU1Q2TAY7 513 aa10.27□□□□□ -0.77
RAB5B-208ENST00000550283 LSM12Q3MHD2 195 aaKnown RBP10.27□□□□□ -0.77
RAB5B-208ENST00000550283 CPTPQ5TA50 214 aa10.27□□□□□ -0.77
RAB5B-208ENST00000550283 SLC22A10Q63ZE4 541 aa10.27□□□□□ -0.77
RAB5B-208ENST00000550283 MFSD12Q6NUT3 480 aa10.27□□□□□ -0.77
RAB5B-208ENST00000550283 EPGNQ6UW88 154 aa10.27□□□□□ -0.77
RAB5B-208ENST00000550283 APOOLQ6UXV4 268 aa10.27□□□□□ -0.77
RAB5B-208ENST00000550283 C3P1Q6ZMU1 363 aa10.27□□□□□ -0.77
RAB5B-208ENST00000550283 CAMKMTQ7Z624 323 aa10.27□□□□□ -0.77
RAB5B-208ENST00000550283 SAMD14Q8IZD0 417 aaPredicted RBP10.27□□□□□ -0.77
RAB5B-208ENST00000550283 TAGAPQ8N103 731 aa10.27□□□□□ -0.77
RAB5B-208ENST00000550283 SLC34A3Q8N130 599 aa10.27□□□□□ -0.77
RAB5B-208ENST00000550283 SLC16A11Q8NCK7 471 aa10.27□□□□□ -0.77
RAB5B-208ENST00000550283 NUP43Q8NFH3 380 aa10.27□□□□□ -0.77
RAB5B-208ENST00000550283 OR9I1Q8NGQ6 314 aa10.27□□□□□ -0.77
RAB5B-208ENST00000550283 PIWIL2Q8TC59 973 aaKnown RBP10.27□□□□□ -0.77
RAB5B-208ENST00000550283 RNF138Q8WVD3 245 aa10.27□□□□□ -0.77
RAB5B-208ENST00000550283 DIO2Q92813 273 aa10.27□□□□□ -0.77
RAB5B-208ENST00000550283 ERP27Q96DN0 273 aa10.27□□□□□ -0.77
RAB5B-208ENST00000550283 MTERF3Q96E29 417 aa10.27□□□□□ -0.77
RAB5B-208ENST00000550283 SGCZQ96LD1 299 aa10.27□□□□□ -0.77
RAB5B-208ENST00000550283 C7orf26Q96N11 449 aa10.27□□□□□ -0.77
RAB5B-208ENST00000550283 RILPQ96NA2 401 aa10.27□□□□□ -0.77
RAB5B-208ENST00000550283 ADOQ96SZ5 270 aa10.27□□□□□ -0.77
RAB5B-208ENST00000550283 FAM173AQ9BQD7 235 aa10.27□□□□□ -0.77
RAB5B-208ENST00000550283 INPP5KQ9BT40 448 aa10.27□□□□□ -0.77
RAB5B-208ENST00000550283 LMF2Q9BU23 707 aaKnown RBP10.27□□□□□ -0.77
RAB5B-208ENST00000550283 DUSP26Q9BV47 211 aa10.27□□□□□ -0.77
RAB5B-208ENST00000550283 ZDHHC11Q9H8X9 412 aa10.27□□□□□ -0.77
RAB5B-208ENST00000550283 SLC6A13Q9NSD5 602 aa10.27□□□□□ -0.77
RAB5B-208ENST00000550283 ACSS1Q9NUB1 689 aaPredicted RBP10.27□□□□□ -0.77
RAB5B-208ENST00000550283 INTS9Q9NV88 658 aaKnown RBP10.27□□□□□ -0.77
RAB5B-208ENST00000550283 SEC14L3Q9UDX4 400 aa10.27□□□□□ -0.77
RAB5B-208ENST00000550283 PRODH2Q9UF12 536 aa10.27□□□□□ -0.77
RAB5B-208ENST00000550283 SH3BGRL2Q9UJC5 107 aa10.27□□□□□ -0.77
RAB5B-208ENST00000550283 TINAGQ9UJW2 476 aa10.27□□□□□ -0.77
RAB5B-208ENST00000550283 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms