RNA–Protein interactions for RNA: ENST00000549151.5

RAPGEF3-219, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 3,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-219ENST00000549151 WACQ9BTA9 647 aa11.22□□□□□ -0.61
RAPGEF3-219ENST00000549151 SEMA4GQ9NTN9 838 aa11.22□□□□□ -0.61
RAPGEF3-219ENST00000549151 TESQ9UGI8 421 aaKnown RBP11.22□□□□□ -0.61
RAPGEF3-219ENST00000549151 ATG4BQ9Y4P1 393 aa11.22□□□□□ -0.61
RAPGEF3-219ENST00000549151 LOC102723532A0A0G2JNH3 316 aa11.21□□□□□ -0.61
RAPGEF3-219ENST00000549151 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.21□□□□□ -0.61
RAPGEF3-219ENST00000549151 LIMS3P0CW19 117 aa11.21□□□□□ -0.61
RAPGEF3-219ENST00000549151 LIMS4P0CW20 117 aa11.21□□□□□ -0.61
RAPGEF3-219ENST00000549151 MC3RP41968 323 aa11.21□□□□□ -0.61
RAPGEF3-219ENST00000549151 KHKP50053 298 aa11.21□□□□□ -0.61
RAPGEF3-219ENST00000549151 SLC16A1P53985 500 aa11.21□□□□□ -0.61
RAPGEF3-219ENST00000549151 TAS2R38P59533 333 aa11.21□□□□□ -0.61
RAPGEF3-219ENST00000549151 FUT5Q11128 374 aa11.21□□□□□ -0.61
RAPGEF3-219ENST00000549151 COX10Q12887 443 aa11.21□□□□□ -0.61
RAPGEF3-219ENST00000549151 TATDN3Q17R31 274 aa11.21□□□□□ -0.61
RAPGEF3-219ENST00000549151 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.21□□□□□ -0.61
RAPGEF3-219ENST00000549151 Q5BKY6 102 aa11.21□□□□□ -0.61
RAPGEF3-219ENST00000549151 SLC35F1Q5T1Q4 408 aa11.21□□□□□ -0.61
RAPGEF3-219ENST00000549151 HSDL2Q6YN16 418 aa11.21□□□□□ -0.61
RAPGEF3-219ENST00000549151 NOXA1Q86UR1 476 aa11.21□□□□□ -0.61
RAPGEF3-219ENST00000549151 KLBQ86Z14 1044 aa11.21□□□□□ -0.61
RAPGEF3-219ENST00000549151 NKAIN4Q8IVV8 208 aa11.21□□□□□ -0.61
RAPGEF3-219ENST00000549151 NEIL3Q8TAT5 605 aa11.21□□□□□ -0.61
RAPGEF3-219ENST00000549151 TMEM163Q8TC26 289 aa11.21□□□□□ -0.61
RAPGEF3-219ENST00000549151 PRRC1Q96M27 445 aa11.21□□□□□ -0.61
RAPGEF3-219ENST00000549151 WDFY2Q96P53 400 aa11.21□□□□□ -0.61
RAPGEF3-219ENST00000549151 ZSCAN32Q9NX65 697 aa11.21□□□□□ -0.61
RAPGEF3-219ENST00000549151 NDOR1Q9UHB4 597 aa11.21□□□□□ -0.61
RAPGEF3-219ENST00000549151 KIAA1671Q9BY89 1806 aa11.21□□□□□ -0.61
RAPGEF3-219ENST00000549151 CXorf51AA0A1B0GTR3 108 aa11.21□□□□□ -0.62
RAPGEF3-219ENST00000549151 C17orf113A0A1B0GUU1 675 aa11.21□□□□□ -0.62
RAPGEF3-219ENST00000549151 ZC3H12DA2A288 527 aaKnown RBP11.21□□□□□ -0.62
RAPGEF3-219ENST00000549151 TBC1D3BA6NDS4 549 aa11.21□□□□□ -0.62
RAPGEF3-219ENST00000549151 HRO43593 1189 aa11.21□□□□□ -0.62
RAPGEF3-219ENST00000549151 CISD3P0C7P0 127 aa11.21□□□□□ -0.62
RAPGEF3-219ENST00000549151 CERS1P27544 350 aa11.21□□□□□ -0.62
RAPGEF3-219ENST00000549151 CTBP2P56545 445 aa11.21□□□□□ -0.62
RAPGEF3-219ENST00000549151 CSNK1G2P78368 415 aa11.21□□□□□ -0.62
RAPGEF3-219ENST00000549151 ASAH1Q13510 395 aa11.21□□□□□ -0.62
RAPGEF3-219ENST00000549151 SLC9A5Q14940 896 aa11.21□□□□□ -0.62
RAPGEF3-219ENST00000549151 ANKRD33Q7Z3H0 272 aa11.21□□□□□ -0.62
RAPGEF3-219ENST00000549151 C12orf76Q8N812 135 aaPredicted RBP11.21□□□□□ -0.62
RAPGEF3-219ENST00000549151 DHRS1Q96LJ7 313 aa11.21□□□□□ -0.62
RAPGEF3-219ENST00000549151 FCRL4Q96PJ5 515 aa11.21□□□□□ -0.62
RAPGEF3-219ENST00000549151 SECISBP2Q96T21 854 aaKnown RBP11.21□□□□□ -0.62
RAPGEF3-219ENST00000549151 RHBGQ9H310 441 aa11.21□□□□□ -0.62
RAPGEF3-219ENST00000549151 ACAD8Q9UKU7 415 aa11.21□□□□□ -0.62
RAPGEF3-219ENST00000549151 GPR34Q9UPC5 381 aa11.21□□□□□ -0.62
RAPGEF3-219ENST00000549151 ENTPD4Q9Y227 616 aa11.21□□□□□ -0.62
RAPGEF3-219ENST00000549151 PLEKHM1Q9Y4G2 1056 aa11.21□□□□□ -0.62
RAPGEF3-219ENST00000549151 SNTNA6NMZ2 147 aa11.2□□□□□ -0.62
RAPGEF3-219ENST00000549151 C4orf51C9J302 202 aa11.2□□□□□ -0.62
RAPGEF3-219ENST00000549151 PIP5K1CO60331 668 aa11.2□□□□□ -0.62
RAPGEF3-219ENST00000549151 UBXN7O94888 489 aa11.2□□□□□ -0.62
RAPGEF3-219ENST00000549151 LGI1O95970 557 aa11.2□□□□□ -0.62
RAPGEF3-219ENST00000549151 ACADMP11310 421 aa11.2□□□□□ -0.62
RAPGEF3-219ENST00000549151 SDHBP21912 280 aa11.2□□□□□ -0.62
RAPGEF3-219ENST00000549151 MAP2K3P46734 347 aa11.2□□□□□ -0.62
RAPGEF3-219ENST00000549151 CDK5Q00535 292 aa11.2□□□□□ -0.62
RAPGEF3-219ENST00000549151 LTB4RQ15722 352 aa11.2□□□□□ -0.62
RAPGEF3-219ENST00000549151 C1orf94Q6P1W5 598 aa11.2□□□□□ -0.62
RAPGEF3-219ENST00000549151 IL20RBQ6UXL0 311 aa11.2□□□□□ -0.62
RAPGEF3-219ENST00000549151 ASB18Q6ZVZ8 466 aa11.2□□□□□ -0.62
RAPGEF3-219ENST00000549151 C16orf62Q7Z3J2 963 aa11.2□□□□□ -0.62
RAPGEF3-219ENST00000549151 NRMQ8IXM6 262 aa11.2□□□□□ -0.62
RAPGEF3-219ENST00000549151 CADM2Q8N3J6 435 aa11.2□□□□□ -0.62
RAPGEF3-219ENST00000549151 CLDN22Q8N7P3 220 aa11.2□□□□□ -0.62
RAPGEF3-219ENST00000549151 YIPF7Q8N8F6 280 aa11.2□□□□□ -0.62
RAPGEF3-219ENST00000549151 GDPD1Q8N9F7 314 aa11.2□□□□□ -0.62
RAPGEF3-219ENST00000549151 TMEM145Q8NBT3 493 aa11.2□□□□□ -0.62
RAPGEF3-219ENST00000549151 OR51G2Q8NGK0 314 aa11.2□□□□□ -0.62
RAPGEF3-219ENST00000549151 OR9A2Q8NGT5 310 aa11.2□□□□□ -0.62
RAPGEF3-219ENST00000549151 AP3S1Q92572 193 aa11.2□□□□□ -0.62
RAPGEF3-219ENST00000549151 CNRIP1Q96F85 164 aaPredicted RBP11.2□□□□□ -0.62
RAPGEF3-219ENST00000549151 CITED4Q96RK1 184 aa11.2□□□□□ -0.62
RAPGEF3-219ENST00000549151 HDHD2Q9H0R4 259 aa11.2□□□□□ -0.62
RAPGEF3-219ENST00000549151 TMEM245Q9H330 911 aa11.2□□□□□ -0.62
RAPGEF3-219ENST00000549151 DEC1Q9P2X7 70 aa11.2□□□□□ -0.62
RAPGEF3-219ENST00000549151 TBX21Q9UL17 535 aa11.2□□□□□ -0.62
RAPGEF3-219ENST00000549151 CLEC4AQ9UMR7 237 aa11.2□□□□□ -0.62
RAPGEF3-219ENST00000549151 SHISA3A0PJX4 238 aa11.2□□□□□ -0.62
RAPGEF3-219ENST00000549151 ISM1B1AKI9 464 aa11.2□□□□□ -0.62
RAPGEF3-219ENST00000549151 VEGFDO43915 354 aa11.2□□□□□ -0.62
RAPGEF3-219ENST00000549151 FCMRO60667 390 aa11.2□□□□□ -0.62
RAPGEF3-219ENST00000549151 YES1P07947 543 aa11.2□□□□□ -0.62
RAPGEF3-219ENST00000549151 TRHRP34981 398 aaPredicted RBP11.2□□□□□ -0.62
RAPGEF3-219ENST00000549151 TRIM23P36406 574 aa11.2□□□□□ -0.62
RAPGEF3-219ENST00000549151 RGS8P57771 180 aaPredicted RBP11.2□□□□□ -0.62
RAPGEF3-219ENST00000549151 CSTF1Q05048 431 aaKnown RBP11.2□□□□□ -0.62
RAPGEF3-219ENST00000549151 ZNF234Q14588 700 aa11.2□□□□□ -0.62
RAPGEF3-219ENST00000549151 HNRNPA1L2Q32P51 320 aaKnown RBP11.2□□□□□ -0.62
RAPGEF3-219ENST00000549151 RNASE12Q5GAN4 147 aaKnown RBP11.2□□□□□ -0.62
RAPGEF3-219ENST00000549151 C3orf38Q5JPI3 329 aa11.2□□□□□ -0.62
RAPGEF3-219ENST00000549151 PLEKHM3Q6ZWE6 761 aa11.2□□□□□ -0.62
RAPGEF3-219ENST00000549151 ERN2Q76MJ5 926 aaKnown RBP11.2□□□□□ -0.62
RAPGEF3-219ENST00000549151 RSPRY1Q96DX4 576 aa11.2□□□□□ -0.62
RAPGEF3-219ENST00000549151 MSLNLQ96KJ4 702 aa11.2□□□□□ -0.62
RAPGEF3-219ENST00000549151 FUZQ9BT04 418 aa11.2□□□□□ -0.62
RAPGEF3-219ENST00000549151 SPATA5L1Q9BVQ7 753 aa11.2□□□□□ -0.62
RAPGEF3-219ENST00000549151 FAIM2Q9BWQ8 316 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms