RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 NODALQ96S42 347 aa17.18■□□□□ 0.34
PRPF40B-206ENST00000547764 PRPF18Q99633 342 aaKnown RBP17.18■□□□□ 0.34
PRPF40B-206ENST00000547764 ANGPTL4Q9BY76 406 aa17.18■□□□□ 0.34
PRPF40B-206ENST00000547764 ZFP64Q9NPA5 681 aa17.18■□□□□ 0.34
PRPF40B-206ENST00000547764 ATAD3AQ9NVI7 634 aa17.18■□□□□ 0.34
PRPF40B-206ENST00000547764 BOKQ9UMX3 212 aaPredicted RBP17.18■□□□□ 0.34
PRPF40B-206ENST00000547764 A0A1B0GTH9 108 aa17.17■□□□□ 0.34
PRPF40B-206ENST00000547764 A0A1W2PRB8 838 aa17.17■□□□□ 0.34
PRPF40B-206ENST00000547764 OR6C70A6NIJ9 312 aa17.17■□□□□ 0.34
PRPF40B-206ENST00000547764 LRRC3CA6NJW4 275 aa17.17■□□□□ 0.34
PRPF40B-206ENST00000547764 TRPC5OSA6NMA1 111 aa17.17■□□□□ 0.34
PRPF40B-206ENST00000547764 SLCO1B7G3V0H7 640 aa17.17■□□□□ 0.34
PRPF40B-206ENST00000547764 TSPAN2O60636 221 aa17.17■□□□□ 0.34
PRPF40B-206ENST00000547764 TRIM3O75382 744 aaPredicted RBP17.17■□□□□ 0.34
PRPF40B-206ENST00000547764 RFPL3SP0C7P2 107 aa17.17■□□□□ 0.34
PRPF40B-206ENST00000547764 PSPHP78330 225 aa17.17■□□□□ 0.34
PRPF40B-206ENST00000547764 FJX1Q86VR8 437 aa17.17■□□□□ 0.34
PRPF40B-206ENST00000547764 FAM109AQ8N4B1 249 aa17.17■□□□□ 0.34
PRPF40B-206ENST00000547764 NATD1Q8N6N6 113 aa17.17■□□□□ 0.34
PRPF40B-206ENST00000547764 RELTQ969Z4 430 aa17.17■□□□□ 0.34
PRPF40B-206ENST00000547764 SLC35A4Q96G79 324 aa17.17■□□□□ 0.34
PRPF40B-206ENST00000547764 COL21A1Q96P44 957 aa17.17■□□□□ 0.34
PRPF40B-206ENST00000547764 ADOQ96SZ5 270 aa17.17■□□□□ 0.34
PRPF40B-206ENST00000547764 WDR55Q9H6Y2 383 aaPredicted RBP17.17■□□□□ 0.34
PRPF40B-206ENST00000547764 EQTNQ9NQ60 294 aa17.17■□□□□ 0.34
PRPF40B-206ENST00000547764 PLSCR2Q9NRY7 297 aa17.17■□□□□ 0.34
PRPF40B-206ENST00000547764 NTMQ9P121 344 aa17.17■□□□□ 0.34
PRPF40B-206ENST00000547764 OR10H1Q9Y4A9 318 aa17.17■□□□□ 0.34
PRPF40B-206ENST00000547764 GTF3C1Q12789 2109 aa17.17■□□□□ 0.34
PRPF40B-206ENST00000547764 ZNF407Q9C0G0 2248 aa17.16■□□□□ 0.34
PRPF40B-206ENST00000547764 GOLGA8QA0A0J9YX86 632 aa17.16■□□□□ 0.34
PRPF40B-206ENST00000547764 A0A1B0GUH1 482 aa17.16■□□□□ 0.34
PRPF40B-206ENST00000547764 GOLGA8OA6NCC3 632 aa17.16■□□□□ 0.34
PRPF40B-206ENST00000547764 WIPF3A6NGB9 483 aa17.16■□□□□ 0.34
PRPF40B-206ENST00000547764 GOLGA8NF8WBI6 632 aa17.16■□□□□ 0.34
PRPF40B-206ENST00000547764 SNX4O95219 450 aa17.16■□□□□ 0.34
PRPF40B-206ENST00000547764 LDLRP01130 860 aa17.16■□□□□ 0.34
PRPF40B-206ENST00000547764 CELA3AP09093 270 aa17.16■□□□□ 0.34
PRPF40B-206ENST00000547764 ABOP16442 354 aa17.16■□□□□ 0.34
PRPF40B-206ENST00000547764 EPHA3P29320 983 aa17.16■□□□□ 0.34
PRPF40B-206ENST00000547764 CA7P43166 264 aa17.16■□□□□ 0.34
PRPF40B-206ENST00000547764 PRKAG1P54619 331 aa17.16■□□□□ 0.34
PRPF40B-206ENST00000547764 GAB1Q13480 694 aa17.16■□□□□ 0.34
PRPF40B-206ENST00000547764 ZNHIT3Q15649 155 aaPredicted RBP17.16■□□□□ 0.34
PRPF40B-206ENST00000547764 C3AR1Q16581 482 aa17.16■□□□□ 0.34
PRPF40B-206ENST00000547764 TMEM198Q66K66 360 aa17.16■□□□□ 0.34
PRPF40B-206ENST00000547764 OGFOD2Q6N063 350 aa17.16■□□□□ 0.34
PRPF40B-206ENST00000547764 TMEM81Q6P7N7 255 aa17.16■□□□□ 0.34
PRPF40B-206ENST00000547764 Q6ZPB1 254 aaPredicted RBP17.16■□□□□ 0.34
PRPF40B-206ENST00000547764 CAMKMTQ7Z624 323 aa17.16■□□□□ 0.34
PRPF40B-206ENST00000547764 NUP43Q8NFH3 380 aa17.16■□□□□ 0.34
PRPF40B-206ENST00000547764 CEP70Q8NHQ1 597 aa17.16■□□□□ 0.34
PRPF40B-206ENST00000547764 PIWIL2Q8TC59 973 aaKnown RBP17.16■□□□□ 0.34
PRPF40B-206ENST00000547764 OR5P2Q8WZ92 322 aa17.16■□□□□ 0.34
PRPF40B-206ENST00000547764 NTNG2Q96CW9 530 aa17.16■□□□□ 0.34
PRPF40B-206ENST00000547764 ZNF597Q96LX8 424 aa17.16■□□□□ 0.34
PRPF40B-206ENST00000547764 LMF2Q9BU23 707 aaKnown RBP17.16■□□□□ 0.34
PRPF40B-206ENST00000547764 DUSP26Q9BV47 211 aa17.16■□□□□ 0.34
PRPF40B-206ENST00000547764 BHLHE41Q9C0J9 482 aaPredicted RBP17.16■□□□□ 0.34
PRPF40B-206ENST00000547764 ZNF703Q9H7S9 590 aaPredicted RBP17.16■□□□□ 0.34
PRPF40B-206ENST00000547764 METTL7AQ9H8H3 244 aa17.16■□□□□ 0.34
PRPF40B-206ENST00000547764 C3orf14Q9HBI5 128 aa17.16■□□□□ 0.34
PRPF40B-206ENST00000547764 SIRT3Q9NTG7 399 aaPredicted RBP17.16■□□□□ 0.34
PRPF40B-206ENST00000547764 SH3BGRL2Q9UJC5 107 aa17.16■□□□□ 0.34
PRPF40B-206ENST00000547764 MAPRE3Q9UPY8 281 aa17.16■□□□□ 0.34
PRPF40B-206ENST00000547764 DIDO1Q9BTC0 2240 aaKnown RBP17.15■□□□□ 0.34
PRPF40B-206ENST00000547764 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.15■□□□□ 0.34
PRPF40B-206ENST00000547764 ANKRD28O15084 1053 aa17.15■□□□□ 0.34
PRPF40B-206ENST00000547764 EMC8O43402 210 aa17.15■□□□□ 0.34
PRPF40B-206ENST00000547764 ABCB7O75027 752 aa17.15■□□□□ 0.34
PRPF40B-206ENST00000547764 C6orf47O95873 294 aa17.15■□□□□ 0.34
PRPF40B-206ENST00000547764 IGHG3P01860 377 aa17.15■□□□□ 0.34
PRPF40B-206ENST00000547764 ALDOCP09972 364 aaKnown RBP17.15■□□□□ 0.34
PRPF40B-206ENST00000547764 IL12BP29460 328 aa17.15■□□□□ 0.34
PRPF40B-206ENST00000547764 KRT20P35900 424 aa17.15■□□□□ 0.34
PRPF40B-206ENST00000547764 PTGDSP41222 190 aa17.15■□□□□ 0.34
PRPF40B-206ENST00000547764 CASP6P55212 293 aa17.15■□□□□ 0.34
PRPF40B-206ENST00000547764 PPP2R2AP63151 447 aa17.15■□□□□ 0.34
PRPF40B-206ENST00000547764 SLC10A1Q14973 349 aa17.15■□□□□ 0.34
PRPF40B-206ENST00000547764 PGS1Q32NB8 556 aa17.15■□□□□ 0.34
PRPF40B-206ENST00000547764 CYP27C1Q4G0S4 372 aa17.15■□□□□ 0.34
PRPF40B-206ENST00000547764 FNDC7Q5VTL7 733 aa17.15■□□□□ 0.34
PRPF40B-206ENST00000547764 ARHGAP11AQ6P4F7 1023 aa17.15■□□□□ 0.34
PRPF40B-206ENST00000547764 PAOXQ6QHF9 649 aa17.15■□□□□ 0.34
PRPF40B-206ENST00000547764 SZRD1Q7Z422 152 aa17.15■□□□□ 0.34
PRPF40B-206ENST00000547764 PACS2Q86VP3 889 aa17.15■□□□□ 0.34
PRPF40B-206ENST00000547764 LRRC8CQ8TDW0 803 aa17.15■□□□□ 0.34
PRPF40B-206ENST00000547764 HOXB13Q92826 284 aaPredicted RBP17.15■□□□□ 0.34
PRPF40B-206ENST00000547764 EFHD2Q96C19 240 aaPredicted RBP17.15■□□□□ 0.34
PRPF40B-206ENST00000547764 TMCO6Q96DC7 493 aa17.15■□□□□ 0.34
PRPF40B-206ENST00000547764 FAM120BQ96EK7 910 aaKnown RBP17.15■□□□□ 0.34
PRPF40B-206ENST00000547764 GIMAP5Q96F15 307 aa17.15■□□□□ 0.34
PRPF40B-206ENST00000547764 DPY30Q9C005 99 aa17.15■□□□□ 0.34
PRPF40B-206ENST00000547764 Q9N2J8 555 aa17.15■□□□□ 0.34
PRPF40B-206ENST00000547764 TINAGQ9UJW2 476 aa17.15■□□□□ 0.34
PRPF40B-206ENST00000547764 CBLCQ9ULV8 474 aa17.15■□□□□ 0.34
PRPF40B-206ENST00000547764 LIPGQ9Y5X9 500 aa17.15■□□□□ 0.34
PRPF40B-206ENST00000547764 MYO7BQ6PIF6 2116 aa17.15■□□□□ 0.34
PRPF40B-206ENST00000547764 TTC36A6NLP5 189 aa17.14■□□□□ 0.33
PRPF40B-206ENST00000547764 CCL21O00585 134 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms