RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 GRK1Q15835 563 aa13.37□□□□□ -0.27
SRP54-202ENST00000546080 CLEC12AQ5QGZ9 265 aa13.37□□□□□ -0.27
SRP54-202ENST00000546080 TXNDC8Q6A555 127 aa13.37□□□□□ -0.27
SRP54-202ENST00000546080 HBMQ6B0K9 141 aa13.37□□□□□ -0.27
SRP54-202ENST00000546080 CTRB2Q6GPI1 263 aa13.37□□□□□ -0.27
SRP54-202ENST00000546080 KIAA1161Q6NSJ0 714 aa13.37□□□□□ -0.27
SRP54-202ENST00000546080 C17orf99Q6UX52 265 aa13.37□□□□□ -0.27
SRP54-202ENST00000546080 IL20RBQ6UXL0 311 aa13.37□□□□□ -0.27
SRP54-202ENST00000546080 TMEM91Q6ZNR0 172 aa13.37□□□□□ -0.27
SRP54-202ENST00000546080 C16orf62Q7Z3J2 963 aa13.37□□□□□ -0.27
SRP54-202ENST00000546080 TECPR1Q7Z6L1 1165 aa13.37□□□□□ -0.27
SRP54-202ENST00000546080 MRGPREQ86SM8 312 aa13.37□□□□□ -0.27
SRP54-202ENST00000546080 SLC9B2Q86UD5 537 aa13.37□□□□□ -0.27
SRP54-202ENST00000546080 KLBQ86Z14 1044 aa13.37□□□□□ -0.27
SRP54-202ENST00000546080 GPALPP1Q8IXQ4 340 aa13.37□□□□□ -0.27
SRP54-202ENST00000546080 LRRC56Q8IYG6 542 aaPredicted RBP13.37□□□□□ -0.27
SRP54-202ENST00000546080 CHST14Q8NCH0 376 aa13.37□□□□□ -0.27
SRP54-202ENST00000546080 OR6T1Q8NGN1 323 aa13.37□□□□□ -0.27
SRP54-202ENST00000546080 OR52N1Q8NH53 320 aa13.37□□□□□ -0.27
SRP54-202ENST00000546080 GNPDA2Q8TDQ7 276 aa13.37□□□□□ -0.27
SRP54-202ENST00000546080 UBE2E3Q969T4 207 aa13.37□□□□□ -0.27
SRP54-202ENST00000546080 OR2M2Q96R28 347 aa13.37□□□□□ -0.27
SRP54-202ENST00000546080 SGPP1Q9BX95 441 aa13.37□□□□□ -0.27
SRP54-202ENST00000546080 KCNN2Q9H2S1 579 aa13.37□□□□□ -0.27
SRP54-202ENST00000546080 SIRT3Q9NTG7 399 aaPredicted RBP13.37□□□□□ -0.27
SRP54-202ENST00000546080 AHSPQ9NZD4 102 aa13.37□□□□□ -0.27
SRP54-202ENST00000546080 NUBP2Q9Y5Y2 271 aa13.37□□□□□ -0.27
SRP54-202ENST00000546080 NINQ8N4C6 2090 aa13.36□□□□□ -0.27
SRP54-202ENST00000546080 TEX13CA0A0J9YWL9 993 aa13.36□□□□□ -0.27
SRP54-202ENST00000546080 EIF4EP06730 217 aaKnown RBP13.36□□□□□ -0.27
SRP54-202ENST00000546080 ATP6V1E1P36543 226 aa13.36□□□□□ -0.27
SRP54-202ENST00000546080 MTNR1BP49286 362 aa13.36□□□□□ -0.27
SRP54-202ENST00000546080 RAB8AP61006 207 aa13.36□□□□□ -0.27
SRP54-202ENST00000546080 EOGTQ5NDL2 527 aa13.36□□□□□ -0.27
SRP54-202ENST00000546080 HENMT1Q5T8I9 393 aaKnown RBP13.36□□□□□ -0.27
SRP54-202ENST00000546080 VASNQ6EMK4 673 aa13.36□□□□□ -0.27
SRP54-202ENST00000546080 GDPD4Q6W3E5 623 aa13.36□□□□□ -0.27
SRP54-202ENST00000546080 HMGN2P46Q86SG4 172 aa13.36□□□□□ -0.27
SRP54-202ENST00000546080 TMEM150AQ86TG1 271 aa13.36□□□□□ -0.27
SRP54-202ENST00000546080 GPR135Q8IZ08 494 aa13.36□□□□□ -0.27
SRP54-202ENST00000546080 XAGE5Q8WWM1 108 aa13.36□□□□□ -0.27
SRP54-202ENST00000546080 SMG9Q9H0W8 520 aaKnown RBP13.36□□□□□ -0.27
SRP54-202ENST00000546080 ABCG4Q9H172 646 aa13.36□□□□□ -0.27
SRP54-202ENST00000546080 ELAC1Q9H777 363 aaKnown RBP13.36□□□□□ -0.27
SRP54-202ENST00000546080 C12orf4Q9NQ89 552 aa13.36□□□□□ -0.27
SRP54-202ENST00000546080 C5AR2Q9P296 337 aa13.36□□□□□ -0.27
SRP54-202ENST00000546080 TRPC4Q9UBN4 977 aa13.36□□□□□ -0.27
SRP54-202ENST00000546080 HS3ST2Q9Y278 367 aa13.36□□□□□ -0.27
SRP54-202ENST00000546080 ANAPC1Q9H1A4 1944 aa13.36□□□□□ -0.27
SRP54-202ENST00000546080 PRAMEF27A3QJZ7 478 aa13.35□□□□□ -0.27
SRP54-202ENST00000546080 FAM170BA6NMN3 283 aa13.35□□□□□ -0.27
SRP54-202ENST00000546080 DVL2O14641 736 aa13.35□□□□□ -0.27
SRP54-202ENST00000546080 TSPAN9O75954 239 aa13.35□□□□□ -0.27
SRP54-202ENST00000546080 CH25HO95992 272 aa13.35□□□□□ -0.27
SRP54-202ENST00000546080 ACP5P13686 325 aa13.35□□□□□ -0.27
SRP54-202ENST00000546080 ATF4P18848 351 aaPredicted RBP13.35□□□□□ -0.27
SRP54-202ENST00000546080 CXCL3P19876 107 aa13.35□□□□□ -0.27
SRP54-202ENST00000546080 GALP22466 123 aa13.35□□□□□ -0.27
SRP54-202ENST00000546080 IFNGR2P38484 337 aa13.35□□□□□ -0.27
SRP54-202ENST00000546080 RFX3P48380 749 aa13.35□□□□□ -0.27
SRP54-202ENST00000546080 CCT3P49368 545 aaKnown RBP13.35□□□□□ -0.27
SRP54-202ENST00000546080 SRP9P49458 86 aaKnown RBP13.35□□□□□ -0.27
SRP54-202ENST00000546080 RAB14P61106 215 aa13.35□□□□□ -0.27
SRP54-202ENST00000546080 TMEM44Q2T9K0 475 aa13.35□□□□□ -0.27
SRP54-202ENST00000546080 FAAH2Q6GMR7 532 aa13.35□□□□□ -0.27
SRP54-202ENST00000546080 TMEM220Q6QAJ8 160 aa13.35□□□□□ -0.27
SRP54-202ENST00000546080 Q6ZVU0 165 aa13.35□□□□□ -0.27
SRP54-202ENST00000546080 NR2C2APQ86WQ0 139 aa13.35□□□□□ -0.27
SRP54-202ENST00000546080 SAMD12Q8N8I0 201 aa13.35□□□□□ -0.27
SRP54-202ENST00000546080 FBXO15Q8NCQ5 510 aaPredicted RBP13.35□□□□□ -0.27
SRP54-202ENST00000546080 OR5D16Q8NGK9 328 aa13.35□□□□□ -0.27
SRP54-202ENST00000546080 PCNPQ8WW12 178 aaKnown RBP13.35□□□□□ -0.27
SRP54-202ENST00000546080 EXOSC8Q96B26 276 aaKnown RBP13.35□□□□□ -0.27
SRP54-202ENST00000546080 NACC2Q96BF6 587 aa13.35□□□□□ -0.27
SRP54-202ENST00000546080 NXPE2Q96DL1 559 aa13.35□□□□□ -0.27
SRP54-202ENST00000546080 SLC35G5Q96KT7 338 aa13.35□□□□□ -0.27
SRP54-202ENST00000546080 TMEM175Q9BSA9 504 aa13.35□□□□□ -0.27
SRP54-202ENST00000546080 OR51I1Q9H343 314 aa13.35□□□□□ -0.27
SRP54-202ENST00000546080 SERHL2Q9H4I8 314 aa13.35□□□□□ -0.27
SRP54-202ENST00000546080 KCNK12Q9HB15 430 aa13.35□□□□□ -0.27
SRP54-202ENST00000546080 CUEDC1Q9NWM3 386 aaPredicted RBP13.35□□□□□ -0.27
SRP54-202ENST00000546080 SLC25A13Q9UJS0 675 aa13.35□□□□□ -0.27
SRP54-202ENST00000546080 A0A087WUU8 490 aa13.35□□□□□ -0.27
SRP54-202ENST00000546080 RTCAO00442 366 aaKnown RBP13.35□□□□□ -0.27
SRP54-202ENST00000546080 PLPP1O14494 284 aa13.35□□□□□ -0.27
SRP54-202ENST00000546080 RNF13O43567 381 aa13.35□□□□□ -0.27
SRP54-202ENST00000546080 ALDH1A1P00352 501 aa13.35□□□□□ -0.27
SRP54-202ENST00000546080 TCRBP04435 133 aa13.35□□□□□ -0.27
SRP54-202ENST00000546080 SSTR2P30874 369 aa13.35□□□□□ -0.27
SRP54-202ENST00000546080 BUD31P41223 144 aaPredicted RBP13.35□□□□□ -0.27
SRP54-202ENST00000546080 CLCNKAP51800 687 aa13.35□□□□□ -0.27
SRP54-202ENST00000546080 FKBP1BP68106 108 aa13.35□□□□□ -0.27
SRP54-202ENST00000546080 TMEM115Q12893 351 aaPredicted RBP13.35□□□□□ -0.27
SRP54-202ENST00000546080 GALEQ14376 348 aa13.35□□□□□ -0.27
SRP54-202ENST00000546080 LGALSLQ3ZCW2 172 aaPredicted RBP13.35□□□□□ -0.27
SRP54-202ENST00000546080 CCSAPQ6IQ19 270 aaPredicted RBP13.35□□□□□ -0.27
SRP54-202ENST00000546080 FAM83HQ6ZRV2 1179 aaPredicted RBP13.35□□□□□ -0.27
SRP54-202ENST00000546080 PLEKHM3Q6ZWE6 761 aa13.35□□□□□ -0.27
SRP54-202ENST00000546080 OLIG3Q7RTU3 272 aa13.35□□□□□ -0.27
SRP54-202ENST00000546080 OR9A1PQ8NGU1 263 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms