RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 CDHR3Q6ZTQ4 885 aa8.15□□□□□ -1.1
CLIP1-218ENST00000545889 SPNS2Q8IVW8 549 aa8.15□□□□□ -1.1
CLIP1-218ENST00000545889 OR2A12Q8NGT7 310 aa8.15□□□□□ -1.1
CLIP1-218ENST00000545889 MOAP1Q96BY2 351 aa8.15□□□□□ -1.1
CLIP1-218ENST00000545889 NARS2Q96I59 477 aaKnown RBP8.15□□□□□ -1.1
CLIP1-218ENST00000545889 SLC29A1Q99808 456 aa8.15□□□□□ -1.1
CLIP1-218ENST00000545889 BOCQ9BWV1 1114 aa8.15□□□□□ -1.1
CLIP1-218ENST00000545889 ATP13A2Q9NQ11 1180 aa8.15□□□□□ -1.1
CLIP1-218ENST00000545889 C14orf105Q9NVL8 296 aa8.15□□□□□ -1.1
CLIP1-218ENST00000545889 HSPB11Q9Y547 144 aa8.15□□□□□ -1.1
CLIP1-218ENST00000545889 EEF1E1-BLOC1S5C9J1V9 151 aa8.15□□□□□ -1.1
CLIP1-218ENST00000545889 ZNF878C9JN71 531 aa8.15□□□□□ -1.1
CLIP1-218ENST00000545889 EEF1E1O43324 174 aaKnown RBP8.15□□□□□ -1.1
CLIP1-218ENST00000545889 BCAS2O75934 225 aaPredicted RBP8.15□□□□□ -1.1
CLIP1-218ENST00000545889 ANXA8P13928 327 aa8.15□□□□□ -1.1
CLIP1-218ENST00000545889 GSTM3P21266 225 aa8.15□□□□□ -1.1
CLIP1-218ENST00000545889 GXYLT1Q4G148 440 aa8.15□□□□□ -1.1
CLIP1-218ENST00000545889 ABCA11PQ4W5N1 156 aa8.15□□□□□ -1.1
CLIP1-218ENST00000545889 PIANPQ8IYJ0 282 aa8.15□□□□□ -1.1
CLIP1-218ENST00000545889 YIPF7Q8N8F6 280 aa8.15□□□□□ -1.1
CLIP1-218ENST00000545889 NUP43Q8NFH3 380 aa8.15□□□□□ -1.1
CLIP1-218ENST00000545889 GDF15Q99988 308 aa8.15□□□□□ -1.1
CLIP1-218ENST00000545889 UTP23Q9BRU9 249 aaKnown RBP8.15□□□□□ -1.1
CLIP1-218ENST00000545889 ALOXE3Q9BYJ1 711 aa8.15□□□□□ -1.1
CLIP1-218ENST00000545889 SCPEP1Q9HB40 452 aa8.15□□□□□ -1.1
CLIP1-218ENST00000545889 FAM120CQ9NX05 1096 aaKnown RBP8.15□□□□□ -1.1
CLIP1-218ENST00000545889 BOKQ9UMX3 212 aaPredicted RBP8.15□□□□□ -1.1
CLIP1-218ENST00000545889 SLC7A11Q9UPY5 501 aa8.15□□□□□ -1.1
CLIP1-218ENST00000545889 TMEM5Q9Y2B1 443 aa8.15□□□□□ -1.1
CLIP1-218ENST00000545889 LOC102723532A0A0G2JNH3 316 aa8.15□□□□□ -1.1
CLIP1-218ENST00000545889 PLSCR5A0PG75 271 aa8.15□□□□□ -1.1
CLIP1-218ENST00000545889 C7orf72A4D263 438 aa8.15□□□□□ -1.1
CLIP1-218ENST00000545889 PEPDP12955 493 aa8.15□□□□□ -1.1
CLIP1-218ENST00000545889 AZGP1P25311 298 aaKnown RBP8.15□□□□□ -1.1
CLIP1-218ENST00000545889 CD27P26842 260 aa8.15□□□□□ -1.1
CLIP1-218ENST00000545889 NPTX1Q15818 432 aa8.15□□□□□ -1.1
CLIP1-218ENST00000545889 RNASE12Q5GAN4 147 aaKnown RBP8.15□□□□□ -1.1
CLIP1-218ENST00000545889 ASTLQ6HA08 431 aaPredicted RBP8.15□□□□□ -1.1
CLIP1-218ENST00000545889 PARS2Q7L3T8 475 aaKnown RBP8.15□□□□□ -1.1
CLIP1-218ENST00000545889 RELL1Q8IUW5 271 aa8.15□□□□□ -1.1
CLIP1-218ENST00000545889 GALNT11Q8NCW6 608 aa8.15□□□□□ -1.1
CLIP1-218ENST00000545889 TMIEQ8NEW7 156 aa8.15□□□□□ -1.1
CLIP1-218ENST00000545889 OR8K3Q8NH51 312 aa8.15□□□□□ -1.1
CLIP1-218ENST00000545889 SPRYD4Q8WW59 207 aaPredicted RBP8.15□□□□□ -1.1
CLIP1-218ENST00000545889 GEMIN6Q8WXD5 167 aaKnown RBP8.15□□□□□ -1.1
CLIP1-218ENST00000545889 GPR22Q99680 433 aa8.15□□□□□ -1.1
CLIP1-218ENST00000545889 SLC6A17Q9H1V8 727 aa8.15□□□□□ -1.1
CLIP1-218ENST00000545889 TAAR2Q9P1P5 351 aa8.15□□□□□ -1.1
CLIP1-218ENST00000545889 PLOD2O00469 737 aa8.15□□□□□ -1.11
CLIP1-218ENST00000545889 BCKDKO14874 412 aa8.15□□□□□ -1.11
CLIP1-218ENST00000545889 CACNG3O60359 315 aa8.15□□□□□ -1.11
CLIP1-218ENST00000545889 CHRM5P08912 532 aaPredicted RBP8.15□□□□□ -1.11
CLIP1-218ENST00000545889 ZNF43P17038 809 aa8.15□□□□□ -1.11
CLIP1-218ENST00000545889 ENPP1P22413 925 aa8.15□□□□□ -1.11
CLIP1-218ENST00000545889 SLC6A6P31641 620 aa8.15□□□□□ -1.11
CLIP1-218ENST00000545889 IDH3AP50213 366 aa8.15□□□□□ -1.11
CLIP1-218ENST00000545889 SLC18A1P54219 525 aa8.15□□□□□ -1.11
CLIP1-218ENST00000545889 PIGFQ07326 219 aa8.15□□□□□ -1.11
CLIP1-218ENST00000545889 EFR3AQ14156 821 aa8.15□□□□□ -1.11
CLIP1-218ENST00000545889 ZNF630Q2M218 657 aaPredicted RBP8.15□□□□□ -1.11
CLIP1-218ENST00000545889 LIPJQ5W064 366 aa8.15□□□□□ -1.11
CLIP1-218ENST00000545889 USP30Q70CQ3 517 aa8.15□□□□□ -1.11
CLIP1-218ENST00000545889 ZNF227Q86WZ6 799 aa8.15□□□□□ -1.11
CLIP1-218ENST00000545889 CRIPAKQ8N1N5 446 aa8.15□□□□□ -1.11
CLIP1-218ENST00000545889 MFSD2AQ8NA29 543 aa8.15□□□□□ -1.11
CLIP1-218ENST00000545889 C2CD4AQ8NCU7 369 aaPredicted RBP8.15□□□□□ -1.11
CLIP1-218ENST00000545889 RANBP9Q96S59 729 aa8.15□□□□□ -1.11
CLIP1-218ENST00000545889 TM9SF2Q99805 663 aa8.15□□□□□ -1.11
CLIP1-218ENST00000545889 HOXD1Q9GZZ0 328 aa8.15□□□□□ -1.11
CLIP1-218ENST00000545889 CAMK2AQ9UQM7 478 aa8.15□□□□□ -1.11
CLIP1-218ENST00000545889 PRSS38A1L453 326 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 GPR89AB7ZAQ6 455 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 EMC8O43402 210 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 ZFAND5O76080 213 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 ATXN1LP0C7T5 689 aaKnown RBP8.14□□□□□ -1.11
CLIP1-218ENST00000545889 GPR89BP0CG08 455 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 VBP1P61758 197 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 EEF1A1P5Q5VTE0 462 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 Q6ZNB5 142 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 OR8S1Q8NH09 359 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 REEP4Q9H6H4 257 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 TMEM185BQ9H7F4 350 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 IL26Q9NPH9 171 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 FGF21Q9NSA1 209 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 NLGN3Q9NZ94 848 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 TMEM9Q9P0T7 183 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 C2orf92A0A1B0GVN3 265 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 C5orf67F2Z3F1 127 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 RFPL1O75677 317 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 NPPAP01160 153 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 TNFSF4P23510 183 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 ALDH3B2P48448 385 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 VASPP50552 380 aaPredicted RBP8.14□□□□□ -1.11
CLIP1-218ENST00000545889 CDK3Q00526 305 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 IRF4Q15306 451 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 TIGD6Q17RP2 521 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 SPIN3Q5JUX0 258 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 ARSKQ6UWY0 536 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 LIPIQ6XZB0 460 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 ASB18Q6ZVZ8 466 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms