RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 C17orf62Q9BQA9 187 aa3.1□□□□□ -1.91
SNHG1-224ENST00000545688 WWP1Q9H0M0 922 aa3.1□□□□□ -1.91
SNHG1-224ENST00000545688 PLEK2Q9NYT0 353 aa3.1□□□□□ -1.91
SNHG1-224ENST00000545688 SENP1Q9P0U3 644 aa3.1□□□□□ -1.91
SNHG1-224ENST00000545688 EIF3KQ9UBQ5 218 aaKnown RBP3.1□□□□□ -1.91
SNHG1-224ENST00000545688 GPR132Q9UNW8 380 aa3.1□□□□□ -1.91
SNHG1-224ENST00000545688 OR1A2Q9Y585 309 aa3.1□□□□□ -1.91
SNHG1-224ENST00000545688 ARID1AO14497 2285 aa3.1□□□□□ -1.91
SNHG1-224ENST00000545688 ATP6AP2A0A1C7CYW4 349 aa3.09□□□□□ -1.91
SNHG1-224ENST00000545688 FRG2CA6NGY1 282 aa3.09□□□□□ -1.91
SNHG1-224ENST00000545688 ST8SIA3O43173 380 aa3.09□□□□□ -1.91
SNHG1-224ENST00000545688 EIF5BO60841 1220 aaKnown RBP3.09□□□□□ -1.91
SNHG1-224ENST00000545688 ANXA9O76027 345 aa3.09□□□□□ -1.91
SNHG1-224ENST00000545688 PROS1P07225 676 aa3.09□□□□□ -1.91
SNHG1-224ENST00000545688 CCR4P51679 360 aa3.09□□□□□ -1.91
SNHG1-224ENST00000545688 STX17P56962 302 aa3.09□□□□□ -1.91
SNHG1-224ENST00000545688 PRKCEQ02156 737 aa3.09□□□□□ -1.91
SNHG1-224ENST00000545688 TWISTNBQ3B726 338 aaPredicted RBP3.09□□□□□ -1.91
SNHG1-224ENST00000545688 UNC50Q53HI1 259 aa3.09□□□□□ -1.91
SNHG1-224ENST00000545688 DCAF12Q5T6F0 453 aa3.09□□□□□ -1.91
SNHG1-224ENST00000545688 FAM219BQ5XKK7 198 aa3.09□□□□□ -1.91
SNHG1-224ENST00000545688 NHLRC1Q6VVB1 395 aa3.09□□□□□ -1.91
SNHG1-224ENST00000545688 WDR49Q8IV35 697 aa3.09□□□□□ -1.91
SNHG1-224ENST00000545688 ZNF444Q8N0Y2 327 aaPredicted RBP3.09□□□□□ -1.91
SNHG1-224ENST00000545688 ICA1LQ8NDH6 482 aa3.09□□□□□ -1.91
SNHG1-224ENST00000545688 CHDHQ8NE62 594 aaPredicted RBP3.09□□□□□ -1.91
SNHG1-224ENST00000545688 DNASE1L2Q92874 299 aa3.09□□□□□ -1.91
SNHG1-224ENST00000545688 PNPLA2Q96AD5 504 aa3.09□□□□□ -1.91
SNHG1-224ENST00000545688 RASL10BQ96S79 203 aa3.09□□□□□ -1.91
SNHG1-224ENST00000545688 IDI2Q9BXS1 227 aa3.09□□□□□ -1.91
SNHG1-224ENST00000545688 CD209Q9NNX6 404 aa3.09□□□□□ -1.91
SNHG1-224ENST00000545688 TAS2R16Q9NYV7 291 aa3.09□□□□□ -1.91
SNHG1-224ENST00000545688 SPG21Q9NZD8 308 aa3.09□□□□□ -1.91
SNHG1-224ENST00000545688 NACAE9PAV3 2078 aa3.08□□□□□ -1.92
SNHG1-224ENST00000545688 IGHV3OR16-12A0A075B7B8 117 aa3.08□□□□□ -1.92
SNHG1-224ENST00000545688 CLRN2A0PK11 232 aa3.08□□□□□ -1.92
SNHG1-224ENST00000545688 ZFP92A6NM28 416 aa3.08□□□□□ -1.92
SNHG1-224ENST00000545688 GPAA1O43292 621 aa3.08□□□□□ -1.92
SNHG1-224ENST00000545688 PLOD3O60568 738 aa3.08□□□□□ -1.92
SNHG1-224ENST00000545688 SIX3O95343 332 aaPredicted RBP3.08□□□□□ -1.92
SNHG1-224ENST00000545688 PRAMEF12O95522 483 aa3.08□□□□□ -1.92
SNHG1-224ENST00000545688 PCCAP05165 728 aaPredicted RBP3.08□□□□□ -1.92
SNHG1-224ENST00000545688 SLC35E2P0CK97 266 aa3.08□□□□□ -1.92
SNHG1-224ENST00000545688 TSPY3P0CV98 308 aa3.08□□□□□ -1.92
SNHG1-224ENST00000545688 TSPY8P0CW00 308 aa3.08□□□□□ -1.92
SNHG1-224ENST00000545688 HSPA5P11021 654 aaKnown RBP3.08□□□□□ -1.92
SNHG1-224ENST00000545688 EZRP15311 586 aaKnown RBP3.08□□□□□ -1.92
SNHG1-224ENST00000545688 CALML3P27482 149 aa3.08□□□□□ -1.92
SNHG1-224ENST00000545688 MTIF2P46199 727 aaKnown RBP3.08□□□□□ -1.92
SNHG1-224ENST00000545688 UCNP55089 124 aa3.08□□□□□ -1.92
SNHG1-224ENST00000545688 SHHQ15465 462 aa3.08□□□□□ -1.92
SNHG1-224ENST00000545688 LRRC26Q2I0M4 334 aa3.08□□□□□ -1.92
SNHG1-224ENST00000545688 CASC4Q6P4E1 433 aa3.08□□□□□ -1.92
SNHG1-224ENST00000545688 C2orf66Q6UXQ4 117 aa3.08□□□□□ -1.92
SNHG1-224ENST00000545688 PP632Q6XCG6 107 aa3.08□□□□□ -1.92
SNHG1-224ENST00000545688 FBXW8Q8N3Y1 598 aa3.08□□□□□ -1.92
SNHG1-224ENST00000545688 SETD6Q8TBK2 473 aa3.08□□□□□ -1.92
SNHG1-224ENST00000545688 FRAT1Q92837 279 aaPredicted RBP3.08□□□□□ -1.92
SNHG1-224ENST00000545688 RAB3CQ96E17 227 aa3.08□□□□□ -1.92
SNHG1-224ENST00000545688 VSIG2Q96IQ7 327 aa3.08□□□□□ -1.92
SNHG1-224ENST00000545688 CXXC4Q9H2H0 198 aa3.08□□□□□ -1.92
SNHG1-224ENST00000545688 TNMDQ9H2S6 317 aa3.08□□□□□ -1.92
SNHG1-224ENST00000545688 SLCO1C1Q9NYB5 712 aa3.08□□□□□ -1.92
SNHG1-224ENST00000545688 NFKBIL1Q9UBC1 381 aaPredicted RBP3.08□□□□□ -1.92
SNHG1-224ENST00000545688 RPS6KB2Q9UBS0 482 aa3.08□□□□□ -1.92
SNHG1-224ENST00000545688 LRRK1Q38SD2 2015 aa3.08□□□□□ -1.92
SNHG1-224ENST00000545688 ZFHX4Q86UP3 3567 aa3.07□□□□□ -1.92
SNHG1-224ENST00000545688 OTOFQ9HC10 1997 aa3.07□□□□□ -1.92
SNHG1-224ENST00000545688 ZDBF2Q9HCK1 2354 aa3.07□□□□□ -1.92
SNHG1-224ENST00000545688 EFCAB7A8K855 629 aa3.07□□□□□ -1.92
SNHG1-224ENST00000545688 CXCL11O14625 94 aa3.07□□□□□ -1.92
SNHG1-224ENST00000545688 SYT7O43581 403 aa3.07□□□□□ -1.92
SNHG1-224ENST00000545688 EIF2S2P20042 333 aaKnown RBP3.07□□□□□ -1.92
SNHG1-224ENST00000545688 CCND3P30281 292 aaPredicted RBP3.07□□□□□ -1.92
SNHG1-224ENST00000545688 ZNF133P52736 654 aaPredicted RBP3.07□□□□□ -1.92
SNHG1-224ENST00000545688 AKAP17AQ02040 695 aaKnown RBP3.07□□□□□ -1.92
SNHG1-224ENST00000545688 SLC10A1Q14973 349 aa3.07□□□□□ -1.92
SNHG1-224ENST00000545688 CCDC152Q4G0S7 254 aa3.07□□□□□ -1.92
SNHG1-224ENST00000545688 PAN3Q58A45 887 aaKnown RBP3.07□□□□□ -1.92
SNHG1-224ENST00000545688 FKBP1CQ5VVH2 108 aa3.07□□□□□ -1.92
SNHG1-224ENST00000545688 SNRNP48Q6IEG0 339 aaKnown RBP3.07□□□□□ -1.92
SNHG1-224ENST00000545688 CYP4V2Q6ZWL3 525 aaPredicted RBP3.07□□□□□ -1.92
SNHG1-224ENST00000545688 OTOAQ7RTW8 1153 aa3.07□□□□□ -1.92
SNHG1-224ENST00000545688 GPR137CQ8N3F9 429 aa3.07□□□□□ -1.92
SNHG1-224ENST00000545688 UXS1Q8NBZ7 420 aa3.07□□□□□ -1.92
SNHG1-224ENST00000545688 OR2L5Q8NG80 312 aa3.07□□□□□ -1.92
SNHG1-224ENST00000545688 SPATA18Q8TC71 538 aa3.07□□□□□ -1.92
SNHG1-224ENST00000545688 GANCQ8TET4 914 aa3.07□□□□□ -1.92
SNHG1-224ENST00000545688 SNRNP40Q96DI7 357 aaKnown RBP3.07□□□□□ -1.92
SNHG1-224ENST00000545688 PIWIL1Q96J94 861 aaKnown RBP3.07□□□□□ -1.92
SNHG1-224ENST00000545688 CASD1Q96PB1 797 aa3.07□□□□□ -1.92
SNHG1-224ENST00000545688 ST6GALNAC5Q9BVH7 336 aa3.07□□□□□ -1.92
SNHG1-224ENST00000545688 C11orf49Q9H6J7 331 aa3.07□□□□□ -1.92
SNHG1-224ENST00000545688 IMPAD1Q9NX62 359 aa3.07□□□□□ -1.92
SNHG1-224ENST00000545688 RPAP1Q9BWH6 1393 aaPredicted RBP3.07□□□□□ -1.92
SNHG1-224ENST00000545688 DOCK3Q8IZD9 2030 aa3.07□□□□□ -1.92
SNHG1-224ENST00000545688 CACNA1HO95180 2353 aa3.07□□□□□ -1.92
SNHG1-224ENST00000545688 FIBPO43427 364 aa3.06□□□□□ -1.92
SNHG1-224ENST00000545688 DUSP14O95147 198 aaKnown RBP3.06□□□□□ -1.92
SNHG1-224ENST00000545688 APBB3O95704 486 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms