RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 TYRP14679 529 aa8.23□□□□□ -1.09
TDP1-204ENST00000545686 RBMS1P29558 406 aaKnown RBP8.23□□□□□ -1.09
TDP1-204ENST00000545686 HTR1FP30939 366 aa8.23□□□□□ -1.09
TDP1-204ENST00000545686 AVPR1BP47901 424 aa8.23□□□□□ -1.09
TDP1-204ENST00000545686 CCR8P51685 355 aa8.23□□□□□ -1.09
TDP1-204ENST00000545686 CCL23P55773 120 aa8.23□□□□□ -1.09
TDP1-204ENST00000545686 CAP1Q01518 475 aa8.23□□□□□ -1.09
TDP1-204ENST00000545686 RPA4Q13156 261 aa8.23□□□□□ -1.09
TDP1-204ENST00000545686 EOGTQ5NDL2 527 aa8.23□□□□□ -1.09
TDP1-204ENST00000545686 ZNF57Q68EA5 555 aaPredicted RBP8.23□□□□□ -1.09
TDP1-204ENST00000545686 TMEM107Q6UX40 140 aa8.23□□□□□ -1.09
TDP1-204ENST00000545686 PARS2Q7L3T8 475 aaKnown RBP8.23□□□□□ -1.09
TDP1-204ENST00000545686 ANKRD53Q8N9V6 530 aa8.23□□□□□ -1.09
TDP1-204ENST00000545686 SLC37A3Q8NCC5 494 aa8.23□□□□□ -1.09
TDP1-204ENST00000545686 VN1R2Q8NFZ6 395 aa8.23□□□□□ -1.09
TDP1-204ENST00000545686 PIGXQ8TBF5 258 aa8.23□□□□□ -1.09
TDP1-204ENST00000545686 XAGE5Q8WWM1 108 aa8.23□□□□□ -1.09
TDP1-204ENST00000545686 IRF7Q92985 503 aa8.23□□□□□ -1.09
TDP1-204ENST00000545686 SENP5Q96HI0 755 aaPredicted RBP8.23□□□□□ -1.09
TDP1-204ENST00000545686 AMDHD1Q96NU7 426 aa8.23□□□□□ -1.09
TDP1-204ENST00000545686 DCLRE1CQ96SD1 692 aaKnown RBP8.23□□□□□ -1.09
TDP1-204ENST00000545686 DHRS9Q9BPW9 319 aa8.23□□□□□ -1.09
TDP1-204ENST00000545686 ZNF649Q9BS31 505 aa8.23□□□□□ -1.09
TDP1-204ENST00000545686 OR52A5Q9H2C5 316 aa8.23□□□□□ -1.09
TDP1-204ENST00000545686 DDX31Q9H8H2 851 aaKnown RBP8.23□□□□□ -1.09
TDP1-204ENST00000545686 SLC28A3Q9HAS3 691 aa8.23□□□□□ -1.09
TDP1-204ENST00000545686 LHX9Q9NQ69 397 aa8.23□□□□□ -1.09
TDP1-204ENST00000545686 ZCCHC3Q9NUD5 404 aaKnown RBP8.23□□□□□ -1.09
TDP1-204ENST00000545686 TRPC4Q9UBN4 977 aa8.23□□□□□ -1.09
TDP1-204ENST00000545686 MALT1Q9UDY8 824 aa8.23□□□□□ -1.09
TDP1-204ENST00000545686 LOC102723532A0A0G2JNH3 316 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 C7orf66A4D0T2 115 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 C12orf71A8MTZ7 269 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 SURF4O15260 269 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 VEGFDO43915 354 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 RFPL3O75679 317 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 RGS9O75916 674 aaPredicted RBP8.22□□□□□ -1.09
TDP1-204ENST00000545686 PAPLNO95428 1278 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 NFATC1O95644 943 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 RPN2P04844 631 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 FPR3P25089 353 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 NTSP30990 170 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 IFNA8P32881 189 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 SOX18P35713 384 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 CD79BP40259 229 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 STAT5AP42229 794 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 ARFIP1P53367 373 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 TAS2R41P59536 307 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 SHC2P98077 582 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 GRIN2CQ14957 1233 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 HSD17B12Q53GQ0 312 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 PLA1AQ53H76 456 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 TMEM215Q68D42 235 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 HBMQ6B0K9 141 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 VASNQ6EMK4 673 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 RFPL4BQ6ZWI9 263 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 ZNF547Q8IVP9 402 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 LMNTD1Q8N9Z9 388 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 OR5D16Q8NGK9 328 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 OR5M3Q8NGP4 307 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 AUTS2Q8WXX7 1259 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 UCN3Q969E3 161 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 NUS1Q96E22 293 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 GPR137Q96N19 417 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 CITED4Q96RK1 184 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 ARHGDIGQ99819 225 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 TMED9Q9BVK6 235 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 SMG9Q9H0W8 520 aaKnown RBP8.22□□□□□ -1.09
TDP1-204ENST00000545686 GLIPR2Q9H4G4 154 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 RRAGCQ9HB90 399 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 EMC7Q9NPA0 242 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 CYSLTR2Q9NS75 346 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 TEX10Q9NXF1 929 aaPredicted RBP8.22□□□□□ -1.09
TDP1-204ENST00000545686 ASF1AQ9Y294 204 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 GPR52Q9Y2T5 361 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 RNF215Q9Y6U7 377 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 BRCA2P51587 3418 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 NUMA1Q14980 2115 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 MUC22E2RYF6 1773 aaPredicted RBP8.22□□□□□ -1.09
TDP1-204ENST00000545686 A0A0A6YYD5 115 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 A0A1W2PQ72 361 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 SHISA3A0PJX4 238 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 LRRTM2O43300 516 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 AKR7A2O43488 359 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 TMPRSS11DO60235 418 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 CHRM4P08173 479 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 ACP5P13686 325 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 LAG3P18627 525 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 CD53P19397 219 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 CELP19835 753 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 DDX6P26196 483 aaKnown RBP eCLIP8.22□□□□□ -1.09
TDP1-204ENST00000545686 EVI2BP34910 448 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 TALDO1P37837 337 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 BUD31P41223 144 aaPredicted RBP8.22□□□□□ -1.09
TDP1-204ENST00000545686 OMPP47874 163 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 RFX3P48380 749 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 RNF144AP50876 292 aaPredicted RBP8.22□□□□□ -1.09
TDP1-204ENST00000545686 DPTQ07507 201 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 FUT5Q11128 374 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 ST3GAL3Q11203 375 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms