RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 AP1S2P56377 157 aa6.17□□□□□ -1.42
LDHA-223ENST00000545215 SORDQ00796 357 aa6.17□□□□□ -1.42
LDHA-223ENST00000545215 EFTUD2Q15029 972 aaKnown RBP eCLIP6.17□□□□□ -1.427e-10■■□□□ 12.7
LDHA-223ENST00000545215 GXYLT1Q4G148 440 aa6.17□□□□□ -1.42
LDHA-223ENST00000545215 NKAIN1Q4KMZ8 207 aa6.17□□□□□ -1.42
LDHA-223ENST00000545215 RBM20Q5T481 1227 aaKnown RBP6.17□□□□□ -1.42
LDHA-223ENST00000545215 GARNL3Q5VVW2 1013 aa6.17□□□□□ -1.42
LDHA-223ENST00000545215 CYB5R2Q6BCY4 276 aa6.17□□□□□ -1.42
LDHA-223ENST00000545215 LIN54Q6MZP7 749 aa6.17□□□□□ -1.42
LDHA-223ENST00000545215 RHBDD2Q6NTF9 364 aa6.17□□□□□ -1.42
LDHA-223ENST00000545215 ZNF529Q6P280 563 aa6.17□□□□□ -1.42
LDHA-223ENST00000545215 B3GNT6Q6ZMB0 384 aa6.17□□□□□ -1.42
LDHA-223ENST00000545215 DNM1P46Q6ZS02 220 aa6.17□□□□□ -1.42
LDHA-223ENST00000545215 PLEKHM3Q6ZWE6 761 aa6.17□□□□□ -1.42
LDHA-223ENST00000545215 TAX1BP1Q86VP1 789 aa6.17□□□□□ -1.42
LDHA-223ENST00000545215 DCUN1D3Q8IWE4 304 aa6.17□□□□□ -1.42
LDHA-223ENST00000545215 TBC1D21Q8IYX1 336 aa6.17□□□□□ -1.42
LDHA-223ENST00000545215 SLC15A4Q8N697 577 aa6.17□□□□□ -1.42
LDHA-223ENST00000545215 FAM98AQ8NCA5 519 aaKnown RBP6.17□□□□□ -1.42
LDHA-223ENST00000545215 OR4E2Q8NGC2 313 aa6.17□□□□□ -1.42
LDHA-223ENST00000545215 RHEBL1Q8TAI7 183 aa6.17□□□□□ -1.42
LDHA-223ENST00000545215 STAG3L4Q8TBR4 150 aa6.17□□□□□ -1.42
LDHA-223ENST00000545215 PROKR1Q8TCW9 393 aa6.17□□□□□ -1.42
LDHA-223ENST00000545215 MCOLN3Q8TDD5 553 aa6.17□□□□□ -1.42
LDHA-223ENST00000545215 FAM216AQ8WUB2 273 aa6.17□□□□□ -1.42
LDHA-223ENST00000545215 SKA2Q8WVK7 121 aaPredicted RBP6.17□□□□□ -1.42
LDHA-223ENST00000545215 IPCEF1Q8WWN9 437 aaPredicted RBP6.17□□□□□ -1.42
LDHA-223ENST00000545215 ATL1Q8WXF7 558 aa6.17□□□□□ -1.42
LDHA-223ENST00000545215 TFGQ92734 400 aaPredicted RBP6.17□□□□□ -1.42
LDHA-223ENST00000545215 RAD51AP1Q96B01 352 aa6.17□□□□□ -1.42
LDHA-223ENST00000545215 PPM1MQ96MI6 270 aa6.17□□□□□ -1.42
LDHA-223ENST00000545215 ZIM3Q96PE6 472 aa6.17□□□□□ -1.42
LDHA-223ENST00000545215 SMC6Q96SB8 1091 aa6.17□□□□□ -1.42
LDHA-223ENST00000545215 H2AFJQ9BTM1 129 aa6.17□□□□□ -1.42
LDHA-223ENST00000545215 ATG10Q9H0Y0 220 aa6.17□□□□□ -1.42
LDHA-223ENST00000545215 OR52A5Q9H2C5 316 aa6.17□□□□□ -1.42
LDHA-223ENST00000545215 SRMSQ9H3Y6 488 aa6.17□□□□□ -1.42
LDHA-223ENST00000545215 WDR54Q9H977 334 aa6.17□□□□□ -1.42
LDHA-223ENST00000545215 BARX1Q9HBU1 254 aaPredicted RBP6.17□□□□□ -1.42
LDHA-223ENST00000545215 MED29Q9NX70 200 aa6.17□□□□□ -1.42
LDHA-223ENST00000545215 SLC17A6Q9P2U8 582 aa6.17□□□□□ -1.42
LDHA-223ENST00000545215 DHCR7Q9UBM7 475 aaKnown RBP6.17□□□□□ -1.42
LDHA-223ENST00000545215 DCDC2Q9UHG0 476 aa6.17□□□□□ -1.42
LDHA-223ENST00000545215 FAM215AQ9Y5M1 114 aa6.17□□□□□ -1.42
LDHA-223ENST00000545215 CADP27708 2225 aa6.16□□□□□ -1.42
LDHA-223ENST00000545215 SMIM23A6NLE4 172 aa6.16□□□□□ -1.42
LDHA-223ENST00000545215 ZNF785A8K8V0 405 aa6.16□□□□□ -1.42
LDHA-223ENST00000545215 IQCF5A8MTL0 148 aa6.16□□□□□ -1.42
LDHA-223ENST00000545215 GFYI3L273 518 aa6.16□□□□□ -1.42
LDHA-223ENST00000545215 MATN2O00339 956 aa6.16□□□□□ -1.42
LDHA-223ENST00000545215 GLRA3O75311 464 aa6.16□□□□□ -1.42
LDHA-223ENST00000545215 PSIP1O75475 530 aaKnown RBP6.16□□□□□ -1.42
LDHA-223ENST00000545215 PIAS1O75925 651 aa6.16□□□□□ -1.42
LDHA-223ENST00000545215 KLHL2O95198 593 aa6.16□□□□□ -1.42
LDHA-223ENST00000545215 WISP3O95389 354 aaPredicted RBP6.16□□□□□ -1.42
LDHA-223ENST00000545215 ITGA5P08648 1049 aa6.16□□□□□ -1.42
LDHA-223ENST00000545215 SLC35E2BP0CK96 405 aa6.16□□□□□ -1.42
LDHA-223ENST00000545215 CCDC166P0CW27 439 aa6.16□□□□□ -1.42
LDHA-223ENST00000545215 ACADLP28330 430 aa6.16□□□□□ -1.42
LDHA-223ENST00000545215 PRDX3P30048 256 aaKnown RBP6.16□□□□□ -1.42
LDHA-223ENST00000545215 SLCO1A2P46721 670 aa6.16□□□□□ -1.42
LDHA-223ENST00000545215 HNMTP50135 292 aa6.16□□□□□ -1.42
LDHA-223ENST00000545215 MNAT1P51948 309 aa6.16□□□□□ -1.42
LDHA-223ENST00000545215 NAA20P61599 178 aa6.16□□□□□ -1.42
LDHA-223ENST00000545215 MXRA7P84157 204 aa6.16□□□□□ -1.42
LDHA-223ENST00000545215 CDKL1Q00532 357 aa6.16□□□□□ -1.42
LDHA-223ENST00000545215 TIAL1Q01085 375 aaKnown RBP eCLIP6.16□□□□□ -1.42
LDHA-223ENST00000545215 BMPR2Q13873 1038 aa6.16□□□□□ -1.42
LDHA-223ENST00000545215 ARHGAP19Q14CB8 494 aa6.16□□□□□ -1.42
LDHA-223ENST00000545215 RBBP7Q16576 425 aa6.16□□□□□ -1.42
LDHA-223ENST00000545215 CCDC153Q494R4 210 aa6.16□□□□□ -1.42
LDHA-223ENST00000545215 ACSBG2Q5FVE4 666 aa6.16□□□□□ -1.42
LDHA-223ENST00000545215 TNFAIP8L3Q5GJ75 292 aa6.16□□□□□ -1.42
LDHA-223ENST00000545215 INTS11Q5TA45 600 aaKnown RBP6.16□□□□□ -1.42
LDHA-223ENST00000545215 AGBL2Q5U5Z8 902 aa6.16□□□□□ -1.42
LDHA-223ENST00000545215 RTL6Q6ICC9 239 aa6.16□□□□□ -1.42
LDHA-223ENST00000545215 METTL2BQ6P1Q9 378 aaKnown RBP6.16□□□□□ -1.42
LDHA-223ENST00000545215 TRABD2AQ86V40 505 aa6.16□□□□□ -1.42
LDHA-223ENST00000545215 CPNE9Q8IYJ1 553 aa6.16□□□□□ -1.42
LDHA-223ENST00000545215 TCAIMQ8N3R3 496 aa6.16□□□□□ -1.42
LDHA-223ENST00000545215 TMEM178AQ8NBL3 297 aa6.16□□□□□ -1.42
LDHA-223ENST00000545215 RELL2Q8NC24 303 aaPredicted RBP6.16□□□□□ -1.42
LDHA-223ENST00000545215 NAXEQ8NCW5 288 aa6.16□□□□□ -1.42
LDHA-223ENST00000545215 ACVR1CQ8NER5 493 aa6.16□□□□□ -1.42
LDHA-223ENST00000545215 OR5K2Q8NHB8 316 aa6.16□□□□□ -1.42
LDHA-223ENST00000545215 LKAAEAR1Q8TD35 194 aa6.16□□□□□ -1.42
LDHA-223ENST00000545215 TMEM171Q8WVE6 324 aa6.16□□□□□ -1.42
LDHA-223ENST00000545215 CFHR4Q92496 578 aa6.16□□□□□ -1.42
LDHA-223ENST00000545215 SPSB4Q96A44 273 aa6.16□□□□□ -1.42
LDHA-223ENST00000545215 CCDC126Q96EE4 140 aa6.16□□□□□ -1.42
LDHA-223ENST00000545215 LINGO1Q96FE5 620 aa6.16□□□□□ -1.42
LDHA-223ENST00000545215 TNFRSF13CQ96RJ3 184 aa6.16□□□□□ -1.42
LDHA-223ENST00000545215 MRPL57Q9BQC6 102 aaKnown RBP6.16□□□□□ -1.42
LDHA-223ENST00000545215 MESP1Q9BRJ9 268 aa6.16□□□□□ -1.42
LDHA-223ENST00000545215 HGH1Q9BTY7 390 aa6.16□□□□□ -1.42
LDHA-223ENST00000545215 TINAGL1Q9GZM7 467 aaPredicted RBP6.16□□□□□ -1.42
LDHA-223ENST00000545215 TFB2MQ9H5Q4 396 aaKnown RBP6.16□□□□□ -1.42
LDHA-223ENST00000545215 PARVBQ9HBI1 364 aa6.16□□□□□ -1.42
LDHA-223ENST00000545215 SLC22A11Q9NSA0 550 aa6.16□□□□□ -1.42
LDHA-223ENST00000545215 TBC1D23Q9NUY8 699 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms