RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 ZNF791Q3KP31 576 aaPredicted RBP6.79□□□□□ -1.32
CPSF7-224ENST00000544990 SH2D4BQ5SQS7 431 aa6.79□□□□□ -1.32
CPSF7-224ENST00000544990 KANK2Q63ZY3 851 aa6.79□□□□□ -1.32
CPSF7-224ENST00000544990 FAM71E1Q6IPT2 247 aa6.79□□□□□ -1.32
CPSF7-224ENST00000544990 FAM180BQ6P0A1 224 aa6.79□□□□□ -1.32
CPSF7-224ENST00000544990 MTFR2Q6P444 385 aa6.79□□□□□ -1.32
CPSF7-224ENST00000544990 FAM111BQ6SJ93 734 aa6.79□□□□□ -1.32
CPSF7-224ENST00000544990 Q6ZSR9 355 aa6.79□□□□□ -1.32
CPSF7-224ENST00000544990 ZCCHC23Q6ZST2 131 aa6.79□□□□□ -1.32
CPSF7-224ENST00000544990 IKBIPQ70UQ0 350 aa6.79□□□□□ -1.32
CPSF7-224ENST00000544990 SLC22A16Q86VW1 577 aa6.79□□□□□ -1.32
CPSF7-224ENST00000544990 FAM9CQ8IZT9 166 aa6.79□□□□□ -1.32
CPSF7-224ENST00000544990 KIRREL3Q8IZU9 778 aa6.79□□□□□ -1.32
CPSF7-224ENST00000544990 ZNF615Q8N8J6 731 aa6.79□□□□□ -1.32
CPSF7-224ENST00000544990 ADCY4Q8NFM4 1077 aa6.79□□□□□ -1.32
CPSF7-224ENST00000544990 OR2M7Q8NG81 312 aa6.79□□□□□ -1.32
CPSF7-224ENST00000544990 ZNF675Q8TD23 568 aa6.79□□□□□ -1.32
CPSF7-224ENST00000544990 TWIST2Q8WVJ9 160 aa6.79□□□□□ -1.32
CPSF7-224ENST00000544990 ADIPOR1Q96A54 375 aa6.79□□□□□ -1.32
CPSF7-224ENST00000544990 CTHRC1Q96CG8 243 aa6.79□□□□□ -1.32
CPSF7-224ENST00000544990 ERP27Q96DN0 273 aa6.79□□□□□ -1.32
CPSF7-224ENST00000544990 HSPBAP1Q96EW2 488 aa6.79□□□□□ -1.32
CPSF7-224ENST00000544990 PGM2Q96G03 612 aa6.79□□□□□ -1.32
CPSF7-224ENST00000544990 MAGED4Q96JG8 741 aa6.79□□□□□ -1.32
CPSF7-224ENST00000544990 ZNF681Q96N22 645 aa6.79□□□□□ -1.32
CPSF7-224ENST00000544990 CCT7Q99832 543 aa6.79□□□□□ -1.32
CPSF7-224ENST00000544990 FAM173AQ9BQD7 235 aa6.79□□□□□ -1.32
CPSF7-224ENST00000544990 TNFRSF12AQ9NP84 129 aa6.79□□□□□ -1.32
CPSF7-224ENST00000544990 MYNNQ9NPC7 610 aa6.79□□□□□ -1.32
CPSF7-224ENST00000544990 ZNF639Q9UID6 485 aa6.79□□□□□ -1.32
CPSF7-224ENST00000544990 ERRFI1Q9UJM3 462 aaPredicted RBP6.79□□□□□ -1.32
CPSF7-224ENST00000544990 TMED5Q9Y3A6 229 aa6.79□□□□□ -1.32
CPSF7-224ENST00000544990 CCL27Q9Y4X3 112 aa6.79□□□□□ -1.32
CPSF7-224ENST00000544990 DNAJC15Q9Y5T4 150 aa6.79□□□□□ -1.32
CPSF7-224ENST00000544990 NPFFR2Q9Y5X5 522 aa6.79□□□□□ -1.32
CPSF7-224ENST00000544990 NINQ8N4C6 2090 aa6.79□□□□□ -1.32
CPSF7-224ENST00000544990 POLEQ07864 2286 aa6.79□□□□□ -1.32
CPSF7-224ENST00000544990 DOPEY2Q9Y3R5 2298 aa6.79□□□□□ -1.32
CPSF7-224ENST00000544990 UBR5O95071 2799 aaPredicted RBP6.79□□□□□ -1.32
CPSF7-224ENST00000544990 HIVEP3Q5T1R4 2406 aa6.78□□□□□ -1.32
CPSF7-224ENST00000544990 WDR91A4D1P6 747 aa6.78□□□□□ -1.32
CPSF7-224ENST00000544990 WIPF3A6NGB9 483 aa6.78□□□□□ -1.32
CPSF7-224ENST00000544990 TMEM114B3SHH9 223 aa6.78□□□□□ -1.32
CPSF7-224ENST00000544990 LSM1O15116 133 aaKnown RBP6.78□□□□□ -1.32
CPSF7-224ENST00000544990 ACOX3O15254 700 aa6.78□□□□□ -1.32
CPSF7-224ENST00000544990 HS6ST1O60243 411 aa6.78□□□□□ -1.32
CPSF7-224ENST00000544990 CDC40O60508 579 aaKnown RBP eCLIP6.78□□□□□ -1.32
CPSF7-224ENST00000544990 ZNF354AO60765 605 aaPredicted RBP6.78□□□□□ -1.32
CPSF7-224ENST00000544990 SLC19A2O60779 497 aa6.78□□□□□ -1.32
CPSF7-224ENST00000544990 HSPA4LO95757 839 aa6.78□□□□□ -1.32
CPSF7-224ENST00000544990 LDLRP01130 860 aa6.78□□□□□ -1.32
CPSF7-224ENST00000544990 CLPSP04118 112 aa6.78□□□□□ -1.32
CPSF7-224ENST00000544990 SERPINE1P05121 402 aa6.78□□□□□ -1.32
CPSF7-224ENST00000544990 CCL3P10147 92 aa6.78□□□□□ -1.32
CPSF7-224ENST00000544990 ABOP16442 354 aa6.78□□□□□ -1.32
CPSF7-224ENST00000544990 NAGAP17050 411 aa6.78□□□□□ -1.32
CPSF7-224ENST00000544990 GPX3P22352 226 aa6.78□□□□□ -1.32
CPSF7-224ENST00000544990 GRK2P25098 689 aa6.78□□□□□ -1.32
CPSF7-224ENST00000544990 NTSP30990 170 aa6.78□□□□□ -1.32
CPSF7-224ENST00000544990 RFC3P40938 356 aa6.78□□□□□ -1.32
CPSF7-224ENST00000544990 CA7P43166 264 aa6.78□□□□□ -1.32
CPSF7-224ENST00000544990 PPICP45877 212 aa6.78□□□□□ -1.32
CPSF7-224ENST00000544990 ASMTP46597 345 aa6.78□□□□□ -1.32
CPSF7-224ENST00000544990 PPIAP62937 165 aaKnown RBP6.78□□□□□ -1.32
CPSF7-224ENST00000544990 RPL38P63173 70 aaKnown RBP6.78□□□□□ -1.32
CPSF7-224ENST00000544990 PSPHP78330 225 aa6.78□□□□□ -1.32
CPSF7-224ENST00000544990 MGAT2Q10469 447 aa6.78□□□□□ -1.32
CPSF7-224ENST00000544990 EXOSC7Q15024 291 aaKnown RBP6.78□□□□□ -1.32
CPSF7-224ENST00000544990 KIAA0040Q15053 153 aa6.78□□□□□ -1.32
CPSF7-224ENST00000544990 RPS6KA2Q15349 733 aa6.78□□□□□ -1.32
CPSF7-224ENST00000544990 NTRK2Q16620 822 aa6.78□□□□□ -1.32
CPSF7-224ENST00000544990 UGT3A2Q3SY77 523 aa6.78□□□□□ -1.32
CPSF7-224ENST00000544990 GALNTL6Q49A17 601 aa6.78□□□□□ -1.32
CPSF7-224ENST00000544990 ATP6AP1LQ52LC2 224 aa6.78□□□□□ -1.32
CPSF7-224ENST00000544990 TRMT12Q53H54 448 aaKnown RBP6.78□□□□□ -1.32
CPSF7-224ENST00000544990 TNFAIP8L3Q5GJ75 292 aa6.78□□□□□ -1.32
CPSF7-224ENST00000544990 C1QL3Q5VWW1 255 aa6.78□□□□□ -1.32
CPSF7-224ENST00000544990 TMEM198Q66K66 360 aa6.78□□□□□ -1.32
CPSF7-224ENST00000544990 MYO7BQ6PIF6 2116 aa6.78□□□□□ -1.32
CPSF7-224ENST00000544990 FJX1Q86VR8 437 aa6.78□□□□□ -1.32
CPSF7-224ENST00000544990 TICAM1Q8IUC6 712 aa6.78□□□□□ -1.32
CPSF7-224ENST00000544990 SPPL2CQ8IUH8 684 aa6.78□□□□□ -1.32
CPSF7-224ENST00000544990 SIAH3Q8IW03 269 aa6.78□□□□□ -1.32
CPSF7-224ENST00000544990 EID3Q8N140 333 aa6.78□□□□□ -1.32
CPSF7-224ENST00000544990 FBXW8Q8N3Y1 598 aa6.78□□□□□ -1.32
CPSF7-224ENST00000544990 ZNF441Q8N8Z8 693 aa6.78□□□□□ -1.32
CPSF7-224ENST00000544990 OR52R1Q8NGF1 315 aa6.78□□□□□ -1.32
CPSF7-224ENST00000544990 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.78□□□□□ -1.32
CPSF7-224ENST00000544990 AGR3Q8TD06 166 aa6.78□□□□□ -1.32
CPSF7-224ENST00000544990 PAQR8Q8TEZ7 354 aa6.78□□□□□ -1.32
CPSF7-224ENST00000544990 DIO2Q92813 273 aa6.78□□□□□ -1.32
CPSF7-224ENST00000544990 RELTQ969Z4 430 aa6.78□□□□□ -1.32
CPSF7-224ENST00000544990 LCORQ96JN0 433 aaPredicted RBP6.78□□□□□ -1.32
CPSF7-224ENST00000544990 PPP3R2Q96LZ3 170 aa6.78□□□□□ -1.32
CPSF7-224ENST00000544990 SECISBP2Q96T21 854 aaKnown RBP6.78□□□□□ -1.32
CPSF7-224ENST00000544990 TTTY12Q9BZ98 90 aa6.78□□□□□ -1.32
CPSF7-224ENST00000544990 TUBB1Q9H4B7 451 aa6.78□□□□□ -1.32
CPSF7-224ENST00000544990 IL1RL2Q9HB29 575 aa6.78□□□□□ -1.32
CPSF7-224ENST00000544990 GP6Q9HCN6 339 aa6.78□□□□□ -1.32
CPSF7-224ENST00000544990 DEPPQ9NTK1 212 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms