RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-223ENST00000542838 SIGIRRQ6IA17 410 aa12.15□□□□□ -0.46
DDX11-223ENST00000542838 RRM2BQ7LG56 351 aa12.15□□□□□ -0.46
DDX11-223ENST00000542838 MRGPREQ86SM8 312 aa12.15□□□□□ -0.46
DDX11-223ENST00000542838 FAM109AQ8N4B1 249 aa12.15□□□□□ -0.46
DDX11-223ENST00000542838 SPRYD4Q8WW59 207 aaPredicted RBP12.15□□□□□ -0.46
DDX11-223ENST00000542838 CHFRQ96EP1 664 aa12.15□□□□□ -0.46
DDX11-223ENST00000542838 COQ7Q99807 217 aa12.15□□□□□ -0.46
DDX11-223ENST00000542838 QRSL1Q9H0R6 528 aaKnown RBP12.15□□□□□ -0.46
DDX11-223ENST00000542838 CDH10Q9Y6N8 788 aa12.15□□□□□ -0.46
DDX11-223ENST00000542838 H7BY64 318 aa12.15□□□□□ -0.46
DDX11-223ENST00000542838 NDUFS4O43181 175 aa12.15□□□□□ -0.46
DDX11-223ENST00000542838 PLOD3O60568 738 aa12.15□□□□□ -0.46
DDX11-223ENST00000542838 NTN1O95631 604 aa12.15□□□□□ -0.46
DDX11-223ENST00000542838 FGBP02675 491 aa12.15□□□□□ -0.46
DDX11-223ENST00000542838 SERPIND1P05546 499 aa12.15□□□□□ -0.46
DDX11-223ENST00000542838 ACP5P13686 325 aa12.15□□□□□ -0.46
DDX11-223ENST00000542838 PSMB5P28074 263 aa12.15□□□□□ -0.46
DDX11-223ENST00000542838 IFNGR2P38484 337 aa12.15□□□□□ -0.46
DDX11-223ENST00000542838 NCBP2P52298 156 aaKnown RBP eCLIP12.15□□□□□ -0.46
DDX11-223ENST00000542838 METAP1P53582 386 aa12.15□□□□□ -0.46
DDX11-223ENST00000542838 ZNF155Q12901 538 aaPredicted RBP12.15□□□□□ -0.46
DDX11-223ENST00000542838 TSPAN31Q12999 210 aa12.15□□□□□ -0.46
DDX11-223ENST00000542838 LRRC32Q14392 662 aa12.15□□□□□ -0.46
DDX11-223ENST00000542838 TRILQ7L0X0 811 aa12.15□□□□□ -0.46
DDX11-223ENST00000542838 POGLUT1Q8NBL1 392 aa12.15□□□□□ -0.46
DDX11-223ENST00000542838 OR2L2Q8NH16 312 aa12.15□□□□□ -0.46
DDX11-223ENST00000542838 RGMAQ96B86 450 aa12.15□□□□□ -0.46
DDX11-223ENST00000542838 NUS1Q96E22 293 aa12.15□□□□□ -0.46
DDX11-223ENST00000542838 PRAP1Q96NZ9 151 aa12.15□□□□□ -0.46
DDX11-223ENST00000542838 MKRN2Q9H000 416 aaKnown RBP12.15□□□□□ -0.46
DDX11-223ENST00000542838 PELI2Q9HAT8 420 aa12.15□□□□□ -0.46
DDX11-223ENST00000542838 HCFC1R1Q9NWW0 138 aa12.15□□□□□ -0.46
DDX11-223ENST00000542838 EXTL2Q9UBQ6 330 aa12.15□□□□□ -0.46
DDX11-223ENST00000542838 MAFFQ9ULX9 164 aa12.15□□□□□ -0.46
DDX11-223ENST00000542838 C17orf113A0A1B0GUU1 675 aa12.14□□□□□ -0.47
DDX11-223ENST00000542838 A0A1W2PQ72 361 aa12.14□□□□□ -0.47
DDX11-223ENST00000542838 CCL16O15467 120 aa12.14□□□□□ -0.47
DDX11-223ENST00000542838 CHST10O43529 356 aa12.14□□□□□ -0.47
DDX11-223ENST00000542838 FRS3O43559 492 aa12.14□□□□□ -0.47
DDX11-223ENST00000542838 ICMTO60725 284 aa12.14□□□□□ -0.47
DDX11-223ENST00000542838 SLC19A2O60779 497 aa12.14□□□□□ -0.47
DDX11-223ENST00000542838 TSC22D2O75157 780 aa12.14□□□□□ -0.47
DDX11-223ENST00000542838 CXCL10P02778 98 aa12.14□□□□□ -0.47
DDX11-223ENST00000542838 ALPPL2P10696 532 aa12.14□□□□□ -0.47
DDX11-223ENST00000542838 ATP6V1E1P36543 226 aa12.14□□□□□ -0.47
DDX11-223ENST00000542838 LASP1Q14847 261 aaKnown RBP12.14□□□□□ -0.47
DDX11-223ENST00000542838 SLC30A6Q6NXT4 461 aa12.14□□□□□ -0.47
DDX11-223ENST00000542838 B3GLCTQ6Y288 498 aa12.14□□□□□ -0.47
DDX11-223ENST00000542838 RASSF6Q6ZTQ3 369 aa12.14□□□□□ -0.47
DDX11-223ENST00000542838 HCAR2Q8TDS4 363 aa12.14□□□□□ -0.47
DDX11-223ENST00000542838 RFKQ969G6 155 aa12.14□□□□□ -0.47
DDX11-223ENST00000542838 AMDHD1Q96NU7 426 aa12.14□□□□□ -0.47
DDX11-223ENST00000542838 TRAF4Q9BUZ4 470 aaPredicted RBP12.14□□□□□ -0.47
DDX11-223ENST00000542838 OR52A5Q9H2C5 316 aa12.14□□□□□ -0.47
DDX11-223ENST00000542838 HMX1Q9NP08 348 aaPredicted RBP12.14□□□□□ -0.47
DDX11-223ENST00000542838 CPSF4LA6NMK7 179 aaKnown RBP12.14□□□□□ -0.47
DDX11-223ENST00000542838 NOS1APO75052 506 aaPredicted RBP12.14□□□□□ -0.47
DDX11-223ENST00000542838 INHAP05111 366 aa12.14□□□□□ -0.47
DDX11-223ENST00000542838 IFI30P13284 250 aa12.14□□□□□ -0.47
DDX11-223ENST00000542838 GNSP15586 552 aa12.14□□□□□ -0.47
DDX11-223ENST00000542838 ELK1P19419 428 aa12.14□□□□□ -0.47
DDX11-223ENST00000542838 CFL1P23528 166 aaKnown RBP12.14□□□□□ -0.47
DDX11-223ENST00000542838 CCR8P51685 355 aa12.14□□□□□ -0.47
DDX11-223ENST00000542838 AGFG1P52594 562 aaKnown RBP12.14□□□□□ -0.47
DDX11-223ENST00000542838 FUT5Q11128 374 aa12.14□□□□□ -0.47
DDX11-223ENST00000542838 IDNKQ5T6J7 187 aa12.14□□□□□ -0.47
DDX11-223ENST00000542838 SUN3Q8TAQ9 357 aa12.14□□□□□ -0.47
DDX11-223ENST00000542838 TTC9Q92623 222 aa12.14□□□□□ -0.47
DDX11-223ENST00000542838 TFGQ92734 400 aaPredicted RBP12.14□□□□□ -0.47
DDX11-223ENST00000542838 TCEAL4Q96EI5 215 aa12.14□□□□□ -0.47
DDX11-223ENST00000542838 LINC00615Q96LM1 132 aaPredicted RBP12.14□□□□□ -0.47
DDX11-223ENST00000542838 DPH7Q9BTV6 452 aa12.14□□□□□ -0.47
DDX11-223ENST00000542838 PINK1Q9BXM7 581 aa12.14□□□□□ -0.47
DDX11-223ENST00000542838 BTBD1Q9H0C5 482 aa12.14□□□□□ -0.47
DDX11-223ENST00000542838 SLC28A3Q9HAS3 691 aa12.14□□□□□ -0.47
DDX11-223ENST00000542838 BCL2L10Q9HD36 194 aa12.14□□□□□ -0.47
DDX11-223ENST00000542838 PAK6Q9NQU5 681 aaPredicted RBP12.14□□□□□ -0.47
DDX11-223ENST00000542838 TDP1Q9NUW8 608 aa12.14□□□□□ -0.47
DDX11-223ENST00000542838 PHF11Q9UIL8 331 aa12.14□□□□□ -0.47
DDX11-223ENST00000542838 POLHQ9Y253 713 aa12.14□□□□□ -0.47
DDX11-223ENST00000542838 ASB4Q9Y574 426 aa12.14□□□□□ -0.47
DDX11-223ENST00000542838 PPM1DO15297 605 aa12.14□□□□□ -0.47
DDX11-223ENST00000542838 OR1F1O43749 312 aa12.14□□□□□ -0.47
DDX11-223ENST00000542838 PRKRAO75569 313 aaKnown RBP12.14□□□□□ -0.47
DDX11-223ENST00000542838 PAPLNO95428 1278 aa12.14□□□□□ -0.47
DDX11-223ENST00000542838 TRIM23P36406 574 aa12.14□□□□□ -0.47
DDX11-223ENST00000542838 MLC1Q15049 377 aa12.14□□□□□ -0.47
DDX11-223ENST00000542838 ASB18Q6ZVZ8 466 aa12.14□□□□□ -0.47
DDX11-223ENST00000542838 AMIGO1Q86WK6 493 aa12.14□□□□□ -0.47
DDX11-223ENST00000542838 KLBQ86Z14 1044 aa12.14□□□□□ -0.47
DDX11-223ENST00000542838 DCUN1D3Q8IWE4 304 aa12.14□□□□□ -0.47
DDX11-223ENST00000542838 OR4M2Q8NGB6 313 aa12.14□□□□□ -0.47
DDX11-223ENST00000542838 DNAJA4Q8WW22 397 aaPredicted RBP12.14□□□□□ -0.47
DDX11-223ENST00000542838 CREB3L1Q96BA8 519 aa12.14□□□□□ -0.47
DDX11-223ENST00000542838 LRIG1Q96JA1 1093 aa12.14□□□□□ -0.47
DDX11-223ENST00000542838 ZNF514Q96K75 400 aaPredicted RBP12.14□□□□□ -0.47
DDX11-223ENST00000542838 HYLS1Q96M11 299 aa12.14□□□□□ -0.47
DDX11-223ENST00000542838 BBS4Q96RK4 519 aa12.14□□□□□ -0.47
DDX11-223ENST00000542838 SECISBP2Q96T21 854 aaKnown RBP12.14□□□□□ -0.47
DDX11-223ENST00000542838 SYNDIG1Q9H7V2 258 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms