RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 AICDAQ9GZX7 198 aa9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 GLIPR2Q9H4G4 154 aa9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 SEMA4GQ9NTN9 838 aa9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 ZFR2Q9UPR6 939 aaKnown RBP9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 PLXNA2O75051 1894 aa9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 CACNA1IQ9P0X4 2223 aa9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 FAM170BA6NMN3 283 aa9.74□□□□□ -0.85
CDC42SE1-207ENST00000540998 KIAA0355O15063 1070 aa9.74□□□□□ -0.85
CDC42SE1-207ENST00000540998 FABP7O15540 132 aa9.74□□□□□ -0.85
CDC42SE1-207ENST00000540998 OR1F1O43749 312 aa9.74□□□□□ -0.85
CDC42SE1-207ENST00000540998 LATS1O95835 1130 aa9.74□□□□□ -0.85
CDC42SE1-207ENST00000540998 INHAP05111 366 aa9.74□□□□□ -0.85
CDC42SE1-207ENST00000540998 RB1P06400 928 aa9.74□□□□□ -0.85
CDC42SE1-207ENST00000540998 C8AP07357 584 aa9.74□□□□□ -0.85
CDC42SE1-207ENST00000540998 FAM157BP0CG42 384 aa9.74□□□□□ -0.85
CDC42SE1-207ENST00000540998 SSTR2P30874 369 aa9.74□□□□□ -0.85
CDC42SE1-207ENST00000540998 ATP6V1E1P36543 226 aa9.74□□□□□ -0.85
CDC42SE1-207ENST00000540998 MMP12P39900 470 aa9.74□□□□□ -0.85
CDC42SE1-207ENST00000540998 ZNF155Q12901 538 aaPredicted RBP9.74□□□□□ -0.85
CDC42SE1-207ENST00000540998 TEAD2Q15562 447 aa9.74□□□□□ -0.85
CDC42SE1-207ENST00000540998 OCLNQ16625 522 aa9.74□□□□□ -0.85
CDC42SE1-207ENST00000540998 KHDRBS2Q5VWX1 349 aaKnown RBP9.74□□□□□ -0.85
CDC42SE1-207ENST00000540998 TMEM107Q6UX40 140 aa9.74□□□□□ -0.85
CDC42SE1-207ENST00000540998 KRT74Q7RTS7 529 aa9.74□□□□□ -0.85
CDC42SE1-207ENST00000540998 TCEAL8Q8IYN2 117 aa9.74□□□□□ -0.85
CDC42SE1-207ENST00000540998 TBC1D19Q8N5T2 526 aa9.74□□□□□ -0.85
CDC42SE1-207ENST00000540998 CLDN22Q8N7P3 220 aa9.74□□□□□ -0.85
CDC42SE1-207ENST00000540998 FGF11Q92914 225 aa9.74□□□□□ -0.85
CDC42SE1-207ENST00000540998 MRGPRX3Q96LB0 322 aa9.74□□□□□ -0.85
CDC42SE1-207ENST00000540998 ZSWIM3Q96MP5 696 aa9.74□□□□□ -0.85
CDC42SE1-207ENST00000540998 POLDIP3Q9BY77 421 aaKnown RBP9.74□□□□□ -0.85
CDC42SE1-207ENST00000540998 SYNPO2LQ9H987 977 aa9.74□□□□□ -0.85
CDC42SE1-207ENST00000540998 POLMQ9NP87 494 aaPredicted RBP9.74□□□□□ -0.85
CDC42SE1-207ENST00000540998 A4GALTQ9NPC4 353 aa9.74□□□□□ -0.85
CDC42SE1-207ENST00000540998 RBFOX1Q9NWB1 397 aaKnown RBP9.74□□□□□ -0.85
CDC42SE1-207ENST00000540998 TP53BP1Q12888 1972 aaPredicted RBP9.74□□□□□ -0.85
CDC42SE1-207ENST00000540998 COL4A3Q01955 1670 aa9.74□□□□□ -0.85
CDC42SE1-207ENST00000540998 MRPL3P09001 348 aaKnown RBP9.74□□□□□ -0.85
CDC42SE1-207ENST00000540998 AHRP35869 848 aa9.74□□□□□ -0.85
CDC42SE1-207ENST00000540998 SLC1A3P43003 542 aa9.74□□□□□ -0.85
CDC42SE1-207ENST00000540998 GPR1P46091 355 aa9.74□□□□□ -0.85
CDC42SE1-207ENST00000540998 NCBP2P52298 156 aaKnown RBP eCLIP9.74□□□□□ -0.85
CDC42SE1-207ENST00000540998 CDH11P55287 796 aa9.74□□□□□ -0.85
CDC42SE1-207ENST00000540998 RPTNQ6XPR3 784 aa9.74□□□□□ -0.85
CDC42SE1-207ENST00000540998 HSDL2Q6YN16 418 aa9.74□□□□□ -0.85
CDC42SE1-207ENST00000540998 GDPGP1Q6ZNW5 385 aa9.74□□□□□ -0.85
CDC42SE1-207ENST00000540998 UBE3DQ7Z6J8 389 aa9.74□□□□□ -0.85
CDC42SE1-207ENST00000540998 C12orf40Q86WS4 652 aa9.74□□□□□ -0.85
CDC42SE1-207ENST00000540998 CPXM2Q8N436 756 aa9.74□□□□□ -0.85
CDC42SE1-207ENST00000540998 SIRT6Q8N6T7 355 aa9.74□□□□□ -0.85
CDC42SE1-207ENST00000540998 OR8H1Q8NGG4 311 aa9.74□□□□□ -0.85
CDC42SE1-207ENST00000540998 OR51G2Q8NGK0 314 aa9.74□□□□□ -0.85
CDC42SE1-207ENST00000540998 MAGEB10Q96LZ2 347 aaPredicted RBP9.74□□□□□ -0.85
CDC42SE1-207ENST00000540998 ENKD1Q9H0I2 346 aa9.74□□□□□ -0.85
CDC42SE1-207ENST00000540998 CCDC86Q9H6F5 360 aaKnown RBP9.74□□□□□ -0.85
CDC42SE1-207ENST00000540998 DDX31Q9H8H2 851 aaKnown RBP9.74□□□□□ -0.85
CDC42SE1-207ENST00000540998 EXTL2Q9UBQ6 330 aa9.74□□□□□ -0.85
CDC42SE1-207ENST00000540998 IL36AQ9UHA7 158 aa9.74□□□□□ -0.85
CDC42SE1-207ENST00000540998 NDOR1Q9UHB4 597 aa9.74□□□□□ -0.85
CDC42SE1-207ENST00000540998 ENOPH1Q9UHY7 261 aa9.74□□□□□ -0.85
CDC42SE1-207ENST00000540998 MAPRE3Q9UPY8 281 aa9.74□□□□□ -0.85
CDC42SE1-207ENST00000540998 LOC105369274A0A096LPK9 316 aa9.73□□□□□ -0.85
CDC42SE1-207ENST00000540998 LRG1P02750 347 aa9.73□□□□□ -0.85
CDC42SE1-207ENST00000540998 HMGN2P05204 90 aaKnown RBP9.73□□□□□ -0.85
CDC42SE1-207ENST00000540998 CDK5Q00535 292 aa9.73□□□□□ -0.85
CDC42SE1-207ENST00000540998 BNC1Q01954 994 aa9.73□□□□□ -0.85
CDC42SE1-207ENST00000540998 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.73□□□□□ -0.85
CDC42SE1-207ENST00000540998 PCDH1Q08174 1060 aa9.73□□□□□ -0.85
CDC42SE1-207ENST00000540998 ZNF793Q6ZN11 406 aa9.73□□□□□ -0.85
CDC42SE1-207ENST00000540998 TMEM91Q6ZNR0 172 aa9.73□□□□□ -0.85
CDC42SE1-207ENST00000540998 FAM129CQ86XR2 697 aa9.73□□□□□ -0.85
CDC42SE1-207ENST00000540998 OR4N4Q8N0Y3 316 aa9.73□□□□□ -0.85
CDC42SE1-207ENST00000540998 SLC43A3Q8NBI5 491 aa9.73□□□□□ -0.85
CDC42SE1-207ENST00000540998 OR13C5Q8NGS8 318 aa9.73□□□□□ -0.85
CDC42SE1-207ENST00000540998 SUN5Q8TC36 379 aa9.73□□□□□ -0.85
CDC42SE1-207ENST00000540998 SLC35G5Q96KT7 338 aa9.73□□□□□ -0.85
CDC42SE1-207ENST00000540998 FCRL4Q96PJ5 515 aa9.73□□□□□ -0.85
CDC42SE1-207ENST00000540998 SECISBP2Q96T21 854 aaKnown RBP9.73□□□□□ -0.85
CDC42SE1-207ENST00000540998 DPH7Q9BTV6 452 aa9.73□□□□□ -0.85
CDC42SE1-207ENST00000540998 CENPVL1A0A0U1RR11 272 aa9.73□□□□□ -0.85
CDC42SE1-207ENST00000540998 ARRDC5A6NEK1 342 aa9.73□□□□□ -0.85
CDC42SE1-207ENST00000540998 E9PI62 339 aa9.73□□□□□ -0.85
CDC42SE1-207ENST00000540998 INMT-MINDY4F8WBC2 141 aa9.73□□□□□ -0.85
CDC42SE1-207ENST00000540998 PITPNM1O00562 1244 aa9.73□□□□□ -0.85
CDC42SE1-207ENST00000540998 EIF4EP06730 217 aaKnown RBP9.73□□□□□ -0.85
CDC42SE1-207ENST00000540998 ACP2P11117 423 aa9.73□□□□□ -0.85
CDC42SE1-207ENST00000540998 ACP5P13686 325 aa9.73□□□□□ -0.85
CDC42SE1-207ENST00000540998 ZNF30P17039 623 aa9.73□□□□□ -0.85
CDC42SE1-207ENST00000540998 POLR2EP19388 210 aaKnown RBP9.73□□□□□ -0.85
CDC42SE1-207ENST00000540998 CXCL3P19876 107 aa9.73□□□□□ -0.85
CDC42SE1-207ENST00000540998 CPN2P22792 545 aa9.73□□□□□ -0.85
CDC42SE1-207ENST00000540998 TAS2R41P59536 307 aa9.73□□□□□ -0.85
CDC42SE1-207ENST00000540998 LTB4RQ15722 352 aa9.73□□□□□ -0.85
CDC42SE1-207ENST00000540998 ZNF658BQ4V348 819 aaPredicted RBP9.73□□□□□ -0.85
CDC42SE1-207ENST00000540998 SLC39A11Q8N1S5 342 aa9.73□□□□□ -0.85
CDC42SE1-207ENST00000540998 OR11H4Q8NGC9 324 aa9.73□□□□□ -0.85
CDC42SE1-207ENST00000540998 OR8K5Q8NH50 307 aa9.73□□□□□ -0.85
CDC42SE1-207ENST00000540998 TEX47Q8TBZ9 253 aa9.73□□□□□ -0.85
CDC42SE1-207ENST00000540998 OR5P2Q8WZ92 322 aa9.73□□□□□ -0.85
CDC42SE1-207ENST00000540998 GCDHQ92947 438 aaPredicted RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms