RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	SNX11	Q9Y5W9	270 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	NIN	Q8N4C6	2090 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	TRBV23OR9-2	A0A075B6M9	112 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	PRAMEF33	A0A0G2JMD5	474 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	CIB4	A0PJX0	185 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783		E9PQ18	207 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	LMO7DN	F2Z398	122 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	ADAMDEC1	O15204	470 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	PRAMEF10	O60809	474 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	MTX2	O75431	263 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	NCR1	O76036	304 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	PROS1	P07225	676 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	F3	P13726	295 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	ANXA8	P13928	327 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	PCSK2	P16519	638 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	ALAS2	P22557	587 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	ERP29	P30040	261 aa	Known RBP	5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	EVI2B	P34910	448 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	RPS5	P46782	204 aa	Known RBP	5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	PRIM2	P49643	509 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	ABAT	P80404	500 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	C19orf57	Q0VDD7	668 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	P2RY14	Q15391	338 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	HLA-B	Q31612	363 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	MLIP	Q5VWP3	458 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	FRG2	Q64ET8	278 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	LAMTOR1	Q6IAA8	161 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	MEX3D	Q86XN8	651 aa	Known RBP	5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	RDH10	Q8IZV5	341 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	TAGAP	Q8N103	731 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	DNAJB8	Q8NHS0	232 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	C1GALT1C1	Q96EU7	318 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	FRG2B	Q96QU4	278 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	CMKLR1	Q99788	373 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	TM9SF2	Q99805	663 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	DHRS9	Q9BPW9	319 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	TAPBPL	Q9BX59	468 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	CDCA4	Q9BXL8	241 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	GON7	Q9BXV9	100 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	ATP13A2	Q9NQ11	1180 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	NLGN3	Q9NZ94	848 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	SSR3	Q9UNL2	185 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	GOLGA4	Q13439	2230 aa	Known RBP	5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	SPTY2D1-AS1	A0A0U1RR47	76 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783		A0A1B0GVC2	190 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	FAM240B	A0A1B0GVZ2	78 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	ANKDD1B	A6NHY2	528 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783		A6NIN4	97 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	LEUTX	A8MZ59	168 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	SAP18	O00422	153 aa	Known RBP	5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	GAPDHS	O14556	408 aa	Predicted RBP	5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	TNFSF14	O43557	240 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	TPST2	O60704	377 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	PSIP1	O75475	530 aa	Known RBP	5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	GADD45G	O95257	159 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	ETHE1	O95571	254 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	SCG5	P05408	212 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	NME1	P15531	152 aa	Known RBP	5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	ZNF250	P15622	560 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	TNNI3	P19429	210 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	PRPS1L1	P21108	318 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	BCKDHB	P21953	392 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	MAPK1	P28482	360 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	IGFALS	P35858	605 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	HNMT	P50135	292 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	MAPK12	P53778	367 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	IRF8	Q02556	426 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	ILK	Q13418	452 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	ASAH1	Q13510	395 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	GLYR1	Q49A26	553 aa	Predicted RBP	5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	C14orf28	Q4W4Y0	310 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	IFI44L	Q53G44	452 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	IER5L	Q5T953	404 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	CPTP	Q5TA50	214 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	FRMPD2B	Q6IN97	320 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	B3GLCT	Q6Y288	498 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	VRK3	Q8IV63	474 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	C1orf52	Q8N6N3	182 aa	Known RBP	5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	TCEANC	Q8N8B7	351 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	ZBTB44	Q8NCP5	570 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	C11orf65	Q8NCR3	313 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	C19orf18	Q8NEA5	215 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	OR4A15	Q8NGL6	344 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	OR4C15	Q8NGM1	316 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	PHF21A	Q96BD5	680 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	ZBED6CL	Q96FA7	236 aa	Predicted RBP	5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	LGR4	Q9BXB1	951 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	NMNAT1	Q9HAN9	279 aa	Predicted RBP	5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	ACER3	Q9NUN7	267 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	FAM86C1	Q9NVL1	165 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	ASIC5	Q9NY37	505 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	MAPRE3	Q9UPY8	281 aa		5.34	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	POLR1C	O15160	346 aa	Predicted RBP	5.34	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	FZD6	O60353	706 aa		5.34	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	PLOD3	O60568	738 aa		5.34	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	SDC3	O75056	442 aa		5.34	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	ALPP	P05187	535 aa		5.34	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	MSL3P1	P0C860	447 aa		5.34	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	SLC2A2	P11168	524 aa	Predicted RBP	5.34	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	EPHA8	P29322	1005 aa	Predicted RBP	5.34	□□□□□ -1.56

Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms