RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 OR6C70A6NIJ9 312 aa6.59□□□□□ -1.35
YBX3-209ENST00000540747 C17orf51A8MQB3 221 aa6.59□□□□□ -1.35
YBX3-209ENST00000540747 SUPT3HB4E1H0 165 aa6.59□□□□□ -1.35
YBX3-209ENST00000540747 EMC8O43402 210 aa6.59□□□□□ -1.35
YBX3-209ENST00000540747 KLF4O43474 513 aa6.59□□□□□ -1.35
YBX3-209ENST00000540747 TSPAN2O60636 221 aa6.59□□□□□ -1.35
YBX3-209ENST00000540747 SUPT3HO75486 399 aa6.59□□□□□ -1.35
YBX3-209ENST00000540747 GBAP04062 536 aa6.59□□□□□ -1.35
YBX3-209ENST00000540747 S100BP04271 92 aaPredicted RBP6.59□□□□□ -1.35
YBX3-209ENST00000540747 THBS1P07996 1170 aa6.59□□□□□ -1.35
YBX3-209ENST00000540747 LTA4HP09960 611 aaKnown RBP6.59□□□□□ -1.35
YBX3-209ENST00000540747 CD8BP10966 210 aa6.59□□□□□ -1.35
YBX3-209ENST00000540747 PORP16435 677 aaPredicted RBP6.59□□□□□ -1.35
YBX3-209ENST00000540747 DRD5P21918 477 aa6.59□□□□□ -1.35
YBX3-209ENST00000540747 PIK3R1P27986 724 aa6.59□□□□□ -1.35
YBX3-209ENST00000540747 GCKP35557 465 aa6.59□□□□□ -1.35
YBX3-209ENST00000540747 CPOXP36551 454 aa6.59□□□□□ -1.35
YBX3-209ENST00000540747 PPICP45877 212 aa6.59□□□□□ -1.35
YBX3-209ENST00000540747 NEK2P51955 445 aa6.59□□□□□ -1.35
YBX3-209ENST00000540747 GPX6P59796 221 aa6.59□□□□□ -1.35
YBX3-209ENST00000540747 PPP2R2BQ00005 443 aa6.59□□□□□ -1.35
YBX3-209ENST00000540747 DR1Q01658 176 aa6.59□□□□□ -1.35
YBX3-209ENST00000540747 SRYQ05066 204 aa6.59□□□□□ -1.35
YBX3-209ENST00000540747 PLCXD2Q0VAA5 305 aa6.59□□□□□ -1.35
YBX3-209ENST00000540747 EXOSC7Q15024 291 aaKnown RBP6.59□□□□□ -1.35
YBX3-209ENST00000540747 TOMM20Q15388 145 aa6.59□□□□□ -1.35
YBX3-209ENST00000540747 ZSCAN26Q16670 478 aa6.59□□□□□ -1.35
YBX3-209ENST00000540747 OR2A2Q6IF42 318 aa6.59□□□□□ -1.35
YBX3-209ENST00000540747 SLC48A1Q6P1K1 146 aa6.59□□□□□ -1.35
YBX3-209ENST00000540747 METTL2BQ6P1Q9 378 aaKnown RBP6.59□□□□□ -1.35
YBX3-209ENST00000540747 FAM111BQ6SJ93 734 aa6.59□□□□□ -1.35
YBX3-209ENST00000540747 CYP20A1Q6UW02 462 aa6.59□□□□□ -1.35
YBX3-209ENST00000540747 IFNEQ86WN2 208 aa6.59□□□□□ -1.35
YBX3-209ENST00000540747 GRAMD2AQ8IUY3 354 aa6.59□□□□□ -1.35
YBX3-209ENST00000540747 ZBED8Q8IZ13 594 aa6.59□□□□□ -1.35
YBX3-209ENST00000540747 GBP7Q8N8V2 638 aaPredicted RBP6.59□□□□□ -1.35
YBX3-209ENST00000540747 FADS6Q8N9I5 356 aa6.59□□□□□ -1.35
YBX3-209ENST00000540747 OR14L1PQ8NHC6 308 aa6.59□□□□□ -1.35
YBX3-209ENST00000540747 RHEBL1Q8TAI7 183 aa6.59□□□□□ -1.35
YBX3-209ENST00000540747 FIG4Q92562 907 aa6.59□□□□□ -1.35
YBX3-209ENST00000540747 REPS1Q96D71 796 aa6.59□□□□□ -1.35
YBX3-209ENST00000540747 ZNF681Q96N22 645 aa6.59□□□□□ -1.35
YBX3-209ENST00000540747 GPR78Q96P69 363 aa6.59□□□□□ -1.35
YBX3-209ENST00000540747 BTBD9Q96Q07 612 aa6.59□□□□□ -1.35
YBX3-209ENST00000540747 SERPINI1Q99574 410 aa6.59□□□□□ -1.35
YBX3-209ENST00000540747 OPN3Q9H1Y3 402 aaPredicted RBP6.59□□□□□ -1.35
YBX3-209ENST00000540747 RNF122Q9H9V4 155 aa6.59□□□□□ -1.35
YBX3-209ENST00000540747 NMRAL1Q9HBL8 299 aa6.59□□□□□ -1.35
YBX3-209ENST00000540747 ELOVL5Q9NYP7 299 aa6.59□□□□□ -1.35
YBX3-209ENST00000540747 ZNF226Q9NYT6 803 aa6.59□□□□□ -1.35
YBX3-209ENST00000540747 EHD3Q9NZN3 535 aa6.59□□□□□ -1.35
YBX3-209ENST00000540747 DMGDHQ9UI17 866 aaKnown RBP6.59□□□□□ -1.35
YBX3-209ENST00000540747 CFL2Q9Y281 166 aa6.59□□□□□ -1.35
YBX3-209ENST00000540747 GPR55Q9Y2T6 319 aaPredicted RBP6.59□□□□□ -1.35
YBX3-209ENST00000540747 ACOT9Q9Y305 439 aa6.59□□□□□ -1.35
YBX3-209ENST00000540747 PLLPQ9Y342 182 aa6.59□□□□□ -1.35
YBX3-209ENST00000540747 RNF11Q9Y3C5 154 aa6.59□□□□□ -1.35
YBX3-209ENST00000540747 PCDHA9Q9Y5H5 950 aa6.59□□□□□ -1.35
YBX3-209ENST00000540747 HMX2A2RU54 273 aa6.58□□□□□ -1.36
YBX3-209ENST00000540747 SLC22A20A6NK97 555 aa6.58□□□□□ -1.36
YBX3-209ENST00000540747 C16orf97H3BN30 126 aa6.58□□□□□ -1.36
YBX3-209ENST00000540747 CCDC188H7C350 402 aa6.58□□□□□ -1.36
YBX3-209ENST00000540747 OR7A17O14581 309 aa6.58□□□□□ -1.36
YBX3-209ENST00000540747 EIF3HO15372 352 aaKnown RBP eCLIP6.58□□□□□ -1.36
YBX3-209ENST00000540747 CT45A8P0DMV1 189 aa6.58□□□□□ -1.36
YBX3-209ENST00000540747 CT45A9P0DMV2 189 aa6.58□□□□□ -1.36
YBX3-209ENST00000540747 KRT15P19012 456 aa6.58□□□□□ -1.36
YBX3-209ENST00000540747 NT5EP21589 574 aa6.58□□□□□ -1.36
YBX3-209ENST00000540747 CRABP2P29373 138 aa6.58□□□□□ -1.36
YBX3-209ENST00000540747 ALDH18A1P54886 795 aaKnown RBP6.58□□□□□ -1.36
YBX3-209ENST00000540747 PHEXP78562 749 aa6.58□□□□□ -1.36
YBX3-209ENST00000540747 OCRLQ01968 901 aa6.58□□□□□ -1.36
YBX3-209ENST00000540747 GUCY2DQ02846 1103 aa6.58□□□□□ -1.36
YBX3-209ENST00000540747 GALNT1Q10472 559 aaPredicted RBP6.58□□□□□ -1.36
YBX3-209ENST00000540747 TRAF3Q13114 568 aa6.58□□□□□ -1.36
YBX3-209ENST00000540747 CPSF6Q16630 551 aaKnown RBP eCLIP6.58□□□□□ -1.36
YBX3-209ENST00000540747 KBTBD12Q3ZCT8 623 aa6.58□□□□□ -1.36
YBX3-209ENST00000540747 TRMT12Q53H54 448 aaKnown RBP6.58□□□□□ -1.36
YBX3-209ENST00000540747 CT45A2Q5DJT8 189 aa6.58□□□□□ -1.36
YBX3-209ENST00000540747 HEPHL1Q6MZM0 1159 aa6.58□□□□□ -1.36
YBX3-209ENST00000540747 AAGABQ6PD74 315 aa6.58□□□□□ -1.36
YBX3-209ENST00000540747 NPSR1Q6W5P4 371 aa6.58□□□□□ -1.36
YBX3-209ENST00000540747 DNM1P46Q6ZS02 220 aa6.58□□□□□ -1.36
YBX3-209ENST00000540747 SH2D5Q6ZV89 423 aa6.58□□□□□ -1.36
YBX3-209ENST00000540747 ZNF550Q7Z398 422 aa6.58□□□□□ -1.36
YBX3-209ENST00000540747 GOLGA7Q7Z5G4 137 aa6.58□□□□□ -1.36
YBX3-209ENST00000540747 PHC2Q8IXK0 858 aa6.58□□□□□ -1.36
YBX3-209ENST00000540747 KLHL7Q8IXQ5 586 aa6.58□□□□□ -1.36
YBX3-209ENST00000540747 GSPT2Q8IYD1 628 aaKnown RBP6.58□□□□□ -1.36
YBX3-209ENST00000540747 METTL4Q8N3J2 472 aa6.58□□□□□ -1.36
YBX3-209ENST00000540747 MEIOBQ8N635 442 aa6.58□□□□□ -1.36
YBX3-209ENST00000540747 RDH11Q8TC12 318 aa6.58□□□□□ -1.36
YBX3-209ENST00000540747 ZNF675Q8TD23 568 aa6.58□□□□□ -1.36
YBX3-209ENST00000540747 TRPC4APQ8TEL6 797 aa6.58□□□□□ -1.36
YBX3-209ENST00000540747 KCTD4Q8WVF5 259 aa6.58□□□□□ -1.36
YBX3-209ENST00000540747 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.58□□□□□ -1.36
YBX3-209ENST00000540747 TMBIM1Q969X1 311 aa6.58□□□□□ -1.36
YBX3-209ENST00000540747 ZBTB9Q96C00 473 aa6.58□□□□□ -1.36
YBX3-209ENST00000540747 NXNL1Q96CM4 212 aa6.58□□□□□ -1.36
YBX3-209ENST00000540747 CNRIP1Q96F85 164 aaPredicted RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms