RNA–Protein interactions for RNA: ENST00000540555.1

TSG101-205, Transcript of tumor susceptibility 101, humanhuman

TSL 2

Gene TSG101, Length 571 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSG101-205ENST00000540555 ADGRF3Q8IZF5 1079 aa3.51□□□□□ -1.85
TSG101-205ENST00000540555 RAB42Q8N4Z0 105 aa3.51□□□□□ -1.85
TSG101-205ENST00000540555 OTUD6BQ8N6M0 293 aa3.51□□□□□ -1.85
TSG101-205ENST00000540555 ZNF527Q8NB42 609 aa3.51□□□□□ -1.85
TSG101-205ENST00000540555 NAXEQ8NCW5 288 aa3.51□□□□□ -1.85
TSG101-205ENST00000540555 ACVR1CQ8NER5 493 aa3.51□□□□□ -1.85
TSG101-205ENST00000540555 OR52K1Q8NGK4 314 aa3.51□□□□□ -1.85
TSG101-205ENST00000540555 OR13C4Q8NGS5 318 aa3.51□□□□□ -1.85
TSG101-205ENST00000540555 OR4L1Q8NH43 312 aa3.51□□□□□ -1.85
TSG101-205ENST00000540555 SLC22A8Q8TCC7 542 aa3.51□□□□□ -1.85
TSG101-205ENST00000540555 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.51□□□□□ -1.85
TSG101-205ENST00000540555 MAGOHBQ96A72 148 aaKnown RBP3.51□□□□□ -1.85
TSG101-205ENST00000540555 CDKN2AIPNLQ96HQ2 116 aa3.51□□□□□ -1.85
TSG101-205ENST00000540555 DNAJC1Q96KC8 554 aaKnown RBP3.51□□□□□ -1.85
TSG101-205ENST00000540555 C12orf66Q96MD2 445 aa3.51□□□□□ -1.85
TSG101-205ENST00000540555 RUNDC3BQ96NL0 473 aa3.51□□□□□ -1.85
TSG101-205ENST00000540555 SNX18Q96RF0 628 aa3.51□□□□□ -1.85
TSG101-205ENST00000540555 IL22Q9GZX6 179 aa3.51□□□□□ -1.85
TSG101-205ENST00000540555 ATG10Q9H0Y0 220 aa3.51□□□□□ -1.85
TSG101-205ENST00000540555 SRMSQ9H3Y6 488 aa3.51□□□□□ -1.85
TSG101-205ENST00000540555 CXorf56Q9H5V9 222 aa3.51□□□□□ -1.85
TSG101-205ENST00000540555 MVB12BQ9H7P6 319 aa3.51□□□□□ -1.85
TSG101-205ENST00000540555 PPCSQ9HAB8 311 aa3.51□□□□□ -1.85
TSG101-205ENST00000540555 EIF2B3Q9NR50 452 aaKnown RBP3.51□□□□□ -1.85
TSG101-205ENST00000540555 IMP3Q9NV31 184 aaKnown RBP3.51□□□□□ -1.85
TSG101-205ENST00000540555 GAR1Q9NY12 217 aaKnown RBP3.51□□□□□ -1.85
TSG101-205ENST00000540555 EURLQ9NYK6 297 aa3.51□□□□□ -1.85
TSG101-205ENST00000540555 SMARCAL1Q9NZC9 954 aa3.51□□□□□ -1.85
TSG101-205ENST00000540555 POLG2Q9UHN1 485 aa3.51□□□□□ -1.85
TSG101-205ENST00000540555 TTC7AQ9ULT0 858 aaPredicted RBP3.51□□□□□ -1.85
TSG101-205ENST00000540555 PLCL2Q9UPR0 1127 aa3.51□□□□□ -1.85
TSG101-205ENST00000540555 EIF3LQ9Y262 564 aaKnown RBP3.51□□□□□ -1.85
TSG101-205ENST00000540555 R3HDM2Q9Y2K5 976 aaKnown RBP3.51□□□□□ -1.85
TSG101-205ENST00000540555 ABCA13Q86UQ4 5058 aa3.51□□□□□ -1.85
TSG101-205ENST00000540555 DNAH7Q8WXX0 4024 aa3.51□□□□□ -1.85
TSG101-205ENST00000540555 PLECQ15149 4684 aaKnown RBP3.5□□□□□ -1.85
TSG101-205ENST00000540555 IGLV3-16A0A075B6K0 115 aa3.5□□□□□ -1.85
TSG101-205ENST00000540555 TRBV5-4A0A0C4DH59 114 aa3.5□□□□□ -1.85
TSG101-205ENST00000540555 A0A0U1RQJ8 604 aa3.5□□□□□ -1.85
TSG101-205ENST00000540555 LOC100653049A0A140TA62 436 aa3.5□□□□□ -1.85
TSG101-205ENST00000540555 GABRR3A8MPY1 467 aa3.5□□□□□ -1.85
TSG101-205ENST00000540555 C2orf74A8MZ97 194 aa3.5□□□□□ -1.85
TSG101-205ENST00000540555 NPIPA2E9PIF3 369 aa3.5□□□□□ -1.85
TSG101-205ENST00000540555 NPIPA3F8WFD2 350 aa3.5□□□□□ -1.85
TSG101-205ENST00000540555 H3BMM5 538 aa3.5□□□□□ -1.85
TSG101-205ENST00000540555 PGRMC1O00264 195 aaKnown RBP3.5□□□□□ -1.85
TSG101-205ENST00000540555 PRMT5O14744 637 aaPredicted RBP3.5□□□□□ -1.85
TSG101-205ENST00000540555 PIP5K1BO14986 540 aa3.5□□□□□ -1.85
TSG101-205ENST00000540555 TMPRSS11DO60235 418 aa3.5□□□□□ -1.85
TSG101-205ENST00000540555 GPRIN2O60269 458 aa3.5□□□□□ -1.85
TSG101-205ENST00000540555 OR10H2O60403 315 aa3.5□□□□□ -1.85
TSG101-205ENST00000540555 NDUFS3O75489 264 aa3.5□□□□□ -1.85
TSG101-205ENST00000540555 KRT34O76011 436 aa3.5□□□□□ -1.85
TSG101-205ENST00000540555 GOT2P00505 430 aaKnown RBP3.5□□□□□ -1.85
TSG101-205ENST00000540555 APOA4P06727 396 aa3.5□□□□□ -1.85
TSG101-205ENST00000540555 MLNP12872 115 aa3.5□□□□□ -1.85
TSG101-205ENST00000540555 APEHP13798 732 aaKnown RBP3.5□□□□□ -1.85
TSG101-205ENST00000540555 TCP1P17987 556 aaKnown RBP3.5□□□□□ -1.85
TSG101-205ENST00000540555 TPSB2P20231 275 aa3.5□□□□□ -1.85
TSG101-205ENST00000540555 CXCR2P25025 360 aa3.5□□□□□ -1.85
TSG101-205ENST00000540555 PSMA3P25788 255 aa3.5□□□□□ -1.85
TSG101-205ENST00000540555 RPL22P35268 128 aaKnown RBP3.5□□□□□ -1.85
TSG101-205ENST00000540555 OPRM1P35372 400 aa3.5□□□□□ -1.85
TSG101-205ENST00000540555 IDUAP35475 653 aa3.5□□□□□ -1.85
TSG101-205ENST00000540555 TIMP3P35625 211 aa3.5□□□□□ -1.85
TSG101-205ENST00000540555 PAFAH1B1P43034 410 aa3.5□□□□□ -1.85
TSG101-205ENST00000540555 FNTAP49354 379 aa3.5□□□□□ -1.85
TSG101-205ENST00000540555 EFNA3P52797 238 aa3.5□□□□□ -1.85
TSG101-205ENST00000540555 EMP2P54851 167 aa3.5□□□□□ -1.85
TSG101-205ENST00000540555 CASP9P55211 416 aa3.5□□□□□ -1.85
TSG101-205ENST00000540555 NANOS3P60323 173 aaKnown RBP3.5□□□□□ -1.85
TSG101-205ENST00000540555 CCZ1BP86790 482 aa3.5□□□□□ -1.85
TSG101-205ENST00000540555 CCZ1P86791 482 aaPredicted RBP3.5□□□□□ -1.85
TSG101-205ENST00000540555 EEF1A2Q05639 463 aaKnown RBP3.5□□□□□ -1.85
TSG101-205ENST00000540555 LOXL1Q08397 574 aaPredicted RBP3.5□□□□□ -1.85
TSG101-205ENST00000540555 MSLNQ13421 630 aaPredicted RBP3.5□□□□□ -1.85
TSG101-205ENST00000540555 PTPRCAPQ14761 206 aa3.5□□□□□ -1.85
TSG101-205ENST00000540555 PPP1R7Q15435 360 aa3.5□□□□□ -1.85
TSG101-205ENST00000540555 TPSAB1Q15661 275 aa3.5□□□□□ -1.85
TSG101-205ENST00000540555 DEFB110Q30KQ9 67 aa3.5□□□□□ -1.85
TSG101-205ENST00000540555 TTLL9Q3SXZ7 439 aa3.5□□□□□ -1.85
TSG101-205ENST00000540555 CCDC38Q502W7 563 aa3.5□□□□□ -1.85
TSG101-205ENST00000540555 DNAJC21Q5F1R6 531 aaKnown RBP3.5□□□□□ -1.85
TSG101-205ENST00000540555 FAM120AOSQ5T036 256 aa3.5□□□□□ -1.85
TSG101-205ENST00000540555 FAM182AQ5T1J6 154 aa3.5□□□□□ -1.85
TSG101-205ENST00000540555 FCRLBQ6BAA4 426 aa3.5□□□□□ -1.85
TSG101-205ENST00000540555 PTRHD1Q6GMV3 140 aaKnown RBP3.5□□□□□ -1.85
TSG101-205ENST00000540555 CASC4Q6P4E1 433 aa3.5□□□□□ -1.85
TSG101-205ENST00000540555 LRRC8BQ6P9F7 803 aa3.5□□□□□ -1.85
TSG101-205ENST00000540555 ZNF788Q6ZQV5 615 aa3.5□□□□□ -1.85
TSG101-205ENST00000540555 RGS9BPQ6ZS82 235 aa3.5□□□□□ -1.85
TSG101-205ENST00000540555 PLEKHM3Q6ZWE6 761 aa3.5□□□□□ -1.85
TSG101-205ENST00000540555 MAATS1Q7Z4T9 603 aa3.5□□□□□ -1.85
TSG101-205ENST00000540555 PCGF5Q86SE9 256 aa3.5□□□□□ -1.85
TSG101-205ENST00000540555 AMIGO1Q86WK6 493 aa3.5□□□□□ -1.85
TSG101-205ENST00000540555 MYLK4Q86YV6 388 aaPredicted RBP3.5□□□□□ -1.85
TSG101-205ENST00000540555 TBC1D21Q8IYX1 336 aa3.5□□□□□ -1.85
TSG101-205ENST00000540555 RASGEF1CQ8N431 466 aa3.5□□□□□ -1.85
TSG101-205ENST00000540555 ARIH2OSQ8N7S6 290 aa3.5□□□□□ -1.85
TSG101-205ENST00000540555 OR4E2Q8NGC2 313 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 194.8 ms