RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 ADCY4Q8NFM4 1077 aa10.89□□□□□ -0.67
CBX3P4-202ENST00000540428 RNF138Q8WVD3 245 aa10.89□□□□□ -0.67
CBX3P4-202ENST00000540428 SFXN2Q96NB2 322 aa10.89□□□□□ -0.67
CBX3P4-202ENST00000540428 FARSBQ9NSD9 589 aaKnown RBP10.89□□□□□ -0.67
CBX3P4-202ENST00000540428 EHD3Q9NZN3 535 aa10.89□□□□□ -0.67
CBX3P4-202ENST00000540428 TRPS1Q9UHF7 1281 aa10.89□□□□□ -0.67
CBX3P4-202ENST00000540428 PYCARDQ9ULZ3 195 aa10.89□□□□□ -0.67
CBX3P4-202ENST00000540428 TESMINQ9Y4I5 508 aa10.89□□□□□ -0.67
CBX3P4-202ENST00000540428 MPDZO75970 2070 aa10.89□□□□□ -0.67
CBX3P4-202ENST00000540428 KIAA1549Q9HCM3 1950 aa10.88□□□□□ -0.67
CBX3P4-202ENST00000540428 A0A1W2PNV4 684 aa10.88□□□□□ -0.67
CBX3P4-202ENST00000540428 TSPAN2O60636 221 aa10.88□□□□□ -0.67
CBX3P4-202ENST00000540428 REM1O75628 298 aa10.88□□□□□ -0.67
CBX3P4-202ENST00000540428 INHBAP08476 426 aa10.88□□□□□ -0.67
CBX3P4-202ENST00000540428 CT45A8P0DMV1 189 aa10.88□□□□□ -0.67
CBX3P4-202ENST00000540428 CT45A9P0DMV2 189 aa10.88□□□□□ -0.67
CBX3P4-202ENST00000540428 PCSK2P16519 638 aa10.88□□□□□ -0.67
CBX3P4-202ENST00000540428 KRT20P35900 424 aa10.88□□□□□ -0.67
CBX3P4-202ENST00000540428 ALDH9A1P49189 494 aa10.88□□□□□ -0.67
CBX3P4-202ENST00000540428 STARP49675 285 aa10.88□□□□□ -0.67
CBX3P4-202ENST00000540428 SERPINB9P50453 376 aa10.88□□□□□ -0.67
CBX3P4-202ENST00000540428 PNLIPRP2P54317 469 aa10.88□□□□□ -0.67
CBX3P4-202ENST00000540428 MRPS35P82673 323 aaKnown RBP10.88□□□□□ -0.67
CBX3P4-202ENST00000540428 CT45A2Q5DJT8 189 aa10.88□□□□□ -0.67
CBX3P4-202ENST00000540428 OR2A2Q6IF42 318 aa10.88□□□□□ -0.67
CBX3P4-202ENST00000540428 LETMD1Q6P1Q0 360 aa10.88□□□□□ -0.67
CBX3P4-202ENST00000540428 TAOK1Q7L7X3 1001 aa10.88□□□□□ -0.67
CBX3P4-202ENST00000540428 GCNT2Q8N0V5 402 aa10.88□□□□□ -0.67
CBX3P4-202ENST00000540428 RDH11Q8TC12 318 aa10.88□□□□□ -0.67
CBX3P4-202ENST00000540428 ZNF483Q8TF39 744 aaPredicted RBP10.88□□□□□ -0.67
CBX3P4-202ENST00000540428 PIGTQ969N2 578 aa10.88□□□□□ -0.67
CBX3P4-202ENST00000540428 TMBIM1Q969X1 311 aa10.88□□□□□ -0.67
CBX3P4-202ENST00000540428 VSTM2LQ96N03 204 aa10.88□□□□□ -0.67
CBX3P4-202ENST00000540428 MRPL57Q9BQC6 102 aaKnown RBP10.88□□□□□ -0.67
CBX3P4-202ENST00000540428 SHCBP1LQ9BZQ2 653 aa10.88□□□□□ -0.67
CBX3P4-202ENST00000540428 MRPL46Q9H2W6 279 aaKnown RBP10.88□□□□□ -0.67
CBX3P4-202ENST00000540428 ZDHHC18Q9NUE0 388 aa10.88□□□□□ -0.67
CBX3P4-202ENST00000540428 NINJ2Q9NZG7 142 aa10.88□□□□□ -0.67
CBX3P4-202ENST00000540428 VPS29Q9UBQ0 182 aa10.88□□□□□ -0.67
CBX3P4-202ENST00000540428 MCM8Q9UJA3 840 aa10.88□□□□□ -0.67
CBX3P4-202ENST00000540428 FBXL2Q9UKC9 423 aa10.88□□□□□ -0.67
CBX3P4-202ENST00000540428 UTS2RQ9UKP6 389 aa10.88□□□□□ -0.67
CBX3P4-202ENST00000540428 HRNRQ86YZ3 2850 aaPredicted RBP10.88□□□□□ -0.67
CBX3P4-202ENST00000540428 DOCK7Q96N67 2140 aa10.88□□□□□ -0.67
CBX3P4-202ENST00000540428 FLNAP21333 2647 aaKnown RBP10.88□□□□□ -0.67
CBX3P4-202ENST00000540428 EXPH5Q8NEV8 1989 aa10.87□□□□□ -0.67
CBX3P4-202ENST00000540428 A0A1B0GTL3 188 aa10.87□□□□□ -0.67
CBX3P4-202ENST00000540428 ESYT3A0FGR9 886 aa10.87□□□□□ -0.67
CBX3P4-202ENST00000540428 CTIFO43310 598 aaKnown RBP10.87□□□□□ -0.67
CBX3P4-202ENST00000540428 HEXAP06865 529 aa10.87□□□□□ -0.67
CBX3P4-202ENST00000540428 CASQ1P31415 396 aa10.87□□□□□ -0.67
CBX3P4-202ENST00000540428 GAS1P54826 345 aa10.87□□□□□ -0.67
CBX3P4-202ENST00000540428 DSCR4P56555 118 aaPredicted RBP10.87□□□□□ -0.67
CBX3P4-202ENST00000540428 MRPS22P82650 360 aaKnown RBP10.87□□□□□ -0.67
CBX3P4-202ENST00000540428 CSTF3Q12996 717 aaKnown RBP10.87□□□□□ -0.67
CBX3P4-202ENST00000540428 LTB4RQ15722 352 aa10.87□□□□□ -0.67
CBX3P4-202ENST00000540428 ERCC6LQ2NKX8 1250 aa10.87□□□□□ -0.67
CBX3P4-202ENST00000540428 CLEC9AQ6UXN8 241 aa10.87□□□□□ -0.67
CBX3P4-202ENST00000540428 C1orf52Q8N6N3 182 aaKnown RBP10.87□□□□□ -0.67
CBX3P4-202ENST00000540428 ADOQ96SZ5 270 aa10.87□□□□□ -0.67
CBX3P4-202ENST00000540428 SMR3AQ99954 134 aa10.87□□□□□ -0.67
CBX3P4-202ENST00000540428 STMN4Q9H169 189 aaPredicted RBP10.87□□□□□ -0.67
CBX3P4-202ENST00000540428 ZNF226Q9NYT6 803 aa10.87□□□□□ -0.67
CBX3P4-202ENST00000540428 HEY2Q9UBP5 337 aa10.87□□□□□ -0.67
CBX3P4-202ENST00000540428 DKKL1Q9UK85 242 aa10.87□□□□□ -0.67
CBX3P4-202ENST00000540428 NFU1Q9UMS0 254 aa10.87□□□□□ -0.67
CBX3P4-202ENST00000540428 MAP1AP78559 2803 aaPredicted RBP10.87□□□□□ -0.67
CBX3P4-202ENST00000540428 LINC01387J3KSC0 135 aa10.86□□□□□ -0.67
CBX3P4-202ENST00000540428 PPP6CO00743 305 aa10.86□□□□□ -0.67
CBX3P4-202ENST00000540428 ZIC3O60481 467 aa10.86□□□□□ -0.67
CBX3P4-202ENST00000540428 PLOD3O60568 738 aa10.86□□□□□ -0.67
CBX3P4-202ENST00000540428 ESRRBO95718 433 aa10.86□□□□□ -0.67
CBX3P4-202ENST00000540428 TGM6O95932 706 aa10.86□□□□□ -0.67
CBX3P4-202ENST00000540428 KRT6AP02538 564 aa10.86□□□□□ -0.67
CBX3P4-202ENST00000540428 KRT6BP04259 564 aa10.86□□□□□ -0.67
CBX3P4-202ENST00000540428 PEPDP12955 493 aa10.86□□□□□ -0.67
CBX3P4-202ENST00000540428 GRK2P25098 689 aa10.86□□□□□ -0.67
CBX3P4-202ENST00000540428 DPP4P27487 766 aa10.86□□□□□ -0.67
CBX3P4-202ENST00000540428 IL12BP29460 328 aa10.86□□□□□ -0.67
CBX3P4-202ENST00000540428 CPOXP36551 454 aa10.86□□□□□ -0.67
CBX3P4-202ENST00000540428 CD79BP40259 229 aa10.86□□□□□ -0.67
CBX3P4-202ENST00000540428 MC3RP41968 323 aa10.86□□□□□ -0.67
CBX3P4-202ENST00000540428 KRT6CP48668 564 aa10.86□□□□□ -0.67
CBX3P4-202ENST00000540428 CDH13P55290 713 aa10.86□□□□□ -0.67
CBX3P4-202ENST00000540428 EEFSECP57772 596 aaKnown RBP10.86□□□□□ -0.67
CBX3P4-202ENST00000540428 FGFBP1Q14512 234 aa10.86□□□□□ -0.67
CBX3P4-202ENST00000540428 HEPACAMQ14CZ8 416 aa10.86□□□□□ -0.67
CBX3P4-202ENST00000540428 RASA2Q15283 850 aa10.86□□□□□ -0.67
CBX3P4-202ENST00000540428 FAM180BQ6P0A1 224 aa10.86□□□□□ -0.67
CBX3P4-202ENST00000540428 PRSS57Q6UWY2 283 aa10.86□□□□□ -0.67
CBX3P4-202ENST00000540428 PLXDC2Q6UX71 529 aa10.86□□□□□ -0.67
CBX3P4-202ENST00000540428 LARP4Q71RC2 724 aaKnown RBP eCLIP10.86□□□□□ -0.67
CBX3P4-202ENST00000540428 RPS27LQ71UM5 84 aaKnown RBP10.86□□□□□ -0.67
CBX3P4-202ENST00000540428 CHMP1BQ7LBR1 199 aa10.86□□□□□ -0.67
CBX3P4-202ENST00000540428 P4HA3Q7Z4N8 544 aa10.86□□□□□ -0.67
CBX3P4-202ENST00000540428 P3H2Q8IVL5 708 aa10.86□□□□□ -0.67
CBX3P4-202ENST00000540428 CCDC116Q8IYX3 515 aa10.86□□□□□ -0.67
CBX3P4-202ENST00000540428 TMEM151AQ8N4L1 468 aa10.86□□□□□ -0.67
CBX3P4-202ENST00000540428 ZNF592Q92610 1267 aa10.86□□□□□ -0.67
CBX3P4-202ENST00000540428 STARD4Q96DR4 205 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms