RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 ALG2Q9H553 416 aa17.54■□□□□ 0.4
TNFRSF1A-213ENST00000540022 CFL2Q9Y281 166 aa17.54■□□□□ 0.4
TNFRSF1A-213ENST00000540022 AP3M1Q9Y2T2 418 aa17.54■□□□□ 0.4
TNFRSF1A-213ENST00000540022 TRBV11-1A0A0K0K1C0 115 aa17.53■□□□□ 0.4
TNFRSF1A-213ENST00000540022 OR6C76A6NM76 312 aa17.53■□□□□ 0.4
TNFRSF1A-213ENST00000540022 ANKRD65E5RJM6 399 aa17.53■□□□□ 0.4
TNFRSF1A-213ENST00000540022 ALOX5P09917 674 aa17.53■□□□□ 0.4
TNFRSF1A-213ENST00000540022 TCN1P20061 433 aaPredicted RBP17.53■□□□□ 0.4
TNFRSF1A-213ENST00000540022 SOX11P35716 441 aa17.53■□□□□ 0.4
TNFRSF1A-213ENST00000540022 MAGEA8P43361 318 aa17.53■□□□□ 0.4
TNFRSF1A-213ENST00000540022 DSTNP60981 165 aa17.53■□□□□ 0.4
TNFRSF1A-213ENST00000540022 RNF4P78317 190 aa17.53■□□□□ 0.4
TNFRSF1A-213ENST00000540022 Q0VFX4 171 aa17.53■□□□□ 0.4
TNFRSF1A-213ENST00000540022 CYP51A1Q16850 503 aa17.53■□□□□ 0.4
TNFRSF1A-213ENST00000540022 NPSR1Q6W5P4 371 aa17.53■□□□□ 0.4
TNFRSF1A-213ENST00000540022 HSDL2Q6YN16 418 aa17.53■□□□□ 0.4
TNFRSF1A-213ENST00000540022 NET1Q7Z628 596 aaPredicted RBP17.53■□□□□ 0.4
TNFRSF1A-213ENST00000540022 PTOV1Q86YD1 416 aa17.53■□□□□ 0.4
TNFRSF1A-213ENST00000540022 HPS6Q86YV9 775 aa17.53■□□□□ 0.4
TNFRSF1A-213ENST00000540022 ZSCAN1Q8NBB4 408 aa17.53■□□□□ 0.4
TNFRSF1A-213ENST00000540022 XAGE5Q8WWM1 108 aa17.53■□□□□ 0.4
TNFRSF1A-213ENST00000540022 ADIPOR1Q96A54 375 aa17.53■□□□□ 0.4
TNFRSF1A-213ENST00000540022 CCNL2Q96S94 520 aaPredicted RBP17.53■□□□□ 0.4
TNFRSF1A-213ENST00000540022 WWTR1Q9GZV5 400 aa17.53■□□□□ 0.4
TNFRSF1A-213ENST00000540022 PIGUQ9H490 435 aa17.53■□□□□ 0.4
TNFRSF1A-213ENST00000540022 PRAMEF27A3QJZ7 478 aa17.52■□□□□ 0.4
TNFRSF1A-213ENST00000540022 NKX2-2O95096 273 aa17.52■□□□□ 0.4
TNFRSF1A-213ENST00000540022 CT45A8P0DMV1 189 aa17.52■□□□□ 0.4
TNFRSF1A-213ENST00000540022 CT45A9P0DMV2 189 aa17.52■□□□□ 0.4
TNFRSF1A-213ENST00000540022 HSD17B1P14061 328 aa17.52■□□□□ 0.4
TNFRSF1A-213ENST00000540022 MSX2P35548 267 aaPredicted RBP17.52■□□□□ 0.4
TNFRSF1A-213ENST00000540022 KCNJ2P63252 427 aa17.52■□□□□ 0.4
TNFRSF1A-213ENST00000540022 CXADRP78310 365 aa17.52■□□□□ 0.4
TNFRSF1A-213ENST00000540022 NNATQ16517 81 aa17.52■□□□□ 0.4
TNFRSF1A-213ENST00000540022 CT45A2Q5DJT8 189 aa17.52■□□□□ 0.4
TNFRSF1A-213ENST00000540022 GCNT6Q5T4J0 391 aa17.52■□□□□ 0.4
TNFRSF1A-213ENST00000540022 SLC29A4Q7RTT9 530 aa17.52■□□□□ 0.4
TNFRSF1A-213ENST00000540022 ZZZ3Q8IYH5 903 aa17.52■□□□□ 0.4
TNFRSF1A-213ENST00000540022 ULK2Q8IYT8 1036 aa17.52■□□□□ 0.4
TNFRSF1A-213ENST00000540022 OR2T12Q8NG77 320 aa17.52■□□□□ 0.4
TNFRSF1A-213ENST00000540022 MAL2Q969L2 176 aa17.52■□□□□ 0.4
TNFRSF1A-213ENST00000540022 UTP4Q969X6 686 aaKnown RBP17.52■□□□□ 0.4
TNFRSF1A-213ENST00000540022 BBC3Q96PG8 261 aaPredicted RBP17.52■□□□□ 0.4
TNFRSF1A-213ENST00000540022 GAL3ST4Q96RP7 486 aa17.52■□□□□ 0.4
TNFRSF1A-213ENST00000540022 CPNE5Q9HCH3 593 aa17.52■□□□□ 0.4
TNFRSF1A-213ENST00000540022 MMP25Q9NPA2 562 aa17.52■□□□□ 0.4
TNFRSF1A-213ENST00000540022 DUSP22Q9NRW4 184 aa17.52■□□□□ 0.4
TNFRSF1A-213ENST00000540022 GPR55Q9Y2T6 319 aaPredicted RBP17.52■□□□□ 0.4
TNFRSF1A-213ENST00000540022 NUP214P35658 2090 aaPredicted RBP17.52■□□□□ 0.4
TNFRSF1A-213ENST00000540022 C2orf92A0A1B0GVN3 265 aa17.52■□□□□ 0.39
TNFRSF1A-213ENST00000540022 DUXAA6NLW8 204 aa17.52■□□□□ 0.39
TNFRSF1A-213ENST00000540022 FAM220BPB1ANY3 271 aa17.52■□□□□ 0.39
TNFRSF1A-213ENST00000540022 ASNA1O43681 348 aa17.52■□□□□ 0.39
TNFRSF1A-213ENST00000540022 PRKAR1AP10644 381 aa17.52■□□□□ 0.39
TNFRSF1A-213ENST00000540022 GABRA3P34903 492 aa17.52■□□□□ 0.39
TNFRSF1A-213ENST00000540022 PPICP45877 212 aa17.52■□□□□ 0.39
TNFRSF1A-213ENST00000540022 ANXA11P50995 505 aaKnown RBP17.52■□□□□ 0.39
TNFRSF1A-213ENST00000540022 TXNL4AP83876 142 aaKnown RBP17.52■□□□□ 0.39
TNFRSF1A-213ENST00000540022 FUT5Q11128 374 aa17.52■□□□□ 0.39
TNFRSF1A-213ENST00000540022 ZNHIT3Q15649 155 aaPredicted RBP17.52■□□□□ 0.39
TNFRSF1A-213ENST00000540022 BROXQ5VW32 411 aa17.52■□□□□ 0.39
TNFRSF1A-213ENST00000540022 FBXW8Q8N3Y1 598 aa17.52■□□□□ 0.39
TNFRSF1A-213ENST00000540022 ZNF441Q8N8Z8 693 aa17.52■□□□□ 0.39
TNFRSF1A-213ENST00000540022 OR8K3Q8NH51 312 aa17.52■□□□□ 0.39
TNFRSF1A-213ENST00000540022 GPR151Q8TDV0 419 aa17.52■□□□□ 0.39
TNFRSF1A-213ENST00000540022 PIK3R3Q92569 461 aa17.52■□□□□ 0.39
TNFRSF1A-213ENST00000540022 CDS1Q92903 461 aa17.52■□□□□ 0.39
TNFRSF1A-213ENST00000540022 REXO5Q96IC2 774 aaKnown RBP17.52■□□□□ 0.39
TNFRSF1A-213ENST00000540022 BTBD9Q96Q07 612 aa17.52■□□□□ 0.39
TNFRSF1A-213ENST00000540022 STACQ99469 402 aa17.52■□□□□ 0.39
TNFRSF1A-213ENST00000540022 KCTD14Q9BQ13 255 aaPredicted RBP17.52■□□□□ 0.39
TNFRSF1A-213ENST00000540022 NXF5Q9H1B4 397 aaKnown RBP17.52■□□□□ 0.39
TNFRSF1A-213ENST00000540022 MMADHCQ9H3L0 296 aaPredicted RBP17.52■□□□□ 0.39
TNFRSF1A-213ENST00000540022 LIN28AQ9H9Z2 209 aaKnown RBP17.52■□□□□ 0.39
TNFRSF1A-213ENST00000540022 GIN1Q9NXP7 522 aa17.52■□□□□ 0.39
TNFRSF1A-213ENST00000540022 GXYLT2A0PJZ3 443 aa17.51■□□□□ 0.39
TNFRSF1A-213ENST00000540022 TMEM200CA6NKL6 621 aa17.51■□□□□ 0.39
TNFRSF1A-213ENST00000540022 DNAJA2O60884 412 aa17.51■□□□□ 0.39
TNFRSF1A-213ENST00000540022 TFPTP0C1Z6 253 aa17.51■□□□□ 0.39
TNFRSF1A-213ENST00000540022 ARAFP10398 606 aa17.51■□□□□ 0.39
TNFRSF1A-213ENST00000540022 ICAM2P13598 275 aa17.51■□□□□ 0.39
TNFRSF1A-213ENST00000540022 UCNP55089 124 aa17.51■□□□□ 0.39
TNFRSF1A-213ENST00000540022 TMPRSS3P57727 454 aa17.51■□□□□ 0.39
TNFRSF1A-213ENST00000540022 MAPK11Q15759 364 aa17.51■□□□□ 0.39
TNFRSF1A-213ENST00000540022 VMACQ2NL98 169 aa17.51■□□□□ 0.39
TNFRSF1A-213ENST00000540022 SPATS1Q496A3 300 aa17.51■□□□□ 0.39
TNFRSF1A-213ENST00000540022 SOWAHCQ53LP3 525 aaPredicted RBP17.51■□□□□ 0.39
TNFRSF1A-213ENST00000540022 DCAF10Q5QP82 559 aa17.51■□□□□ 0.39
TNFRSF1A-213ENST00000540022 HLA-DQA1Q5Y7H0 255 aa17.51■□□□□ 0.39
TNFRSF1A-213ENST00000540022 SLC44A2Q8IWA5 706 aaPredicted RBP17.51■□□□□ 0.39
TNFRSF1A-213ENST00000540022 OR4N2Q8NGD1 307 aa17.51■□□□□ 0.39
TNFRSF1A-213ENST00000540022 NUBPLQ8TB37 319 aa17.51■□□□□ 0.39
TNFRSF1A-213ENST00000540022 THAP3Q8WTV1 239 aaPredicted RBP17.51■□□□□ 0.39
TNFRSF1A-213ENST00000540022 DEFB126Q9BYW3 111 aa17.51■□□□□ 0.39
TNFRSF1A-213ENST00000540022 TMEM38AQ9H6F2 299 aa17.51■□□□□ 0.39
TNFRSF1A-213ENST00000540022 THUMPD1Q9NXG2 353 aaKnown RBP17.51■□□□□ 0.39
TNFRSF1A-213ENST00000540022 ATRXP46100 2492 aa17.5■□□□□ 0.39
TNFRSF1A-213ENST00000540022 TTC36A6NLP5 189 aa17.5■□□□□ 0.39
TNFRSF1A-213ENST00000540022 ZNF891A8MT65 544 aaPredicted RBP17.5■□□□□ 0.39
TNFRSF1A-213ENST00000540022 A8MVJ9 347 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms