RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 RUNX2Q13950 521 aa8.3□□□□□ -1.08
DDB1-213ENST00000539332 ZNF630Q2M218 657 aaPredicted RBP8.3□□□□□ -1.08
DDB1-213ENST00000539332 ZNF181Q2M3W8 571 aa8.3□□□□□ -1.08
DDB1-213ENST00000539332 ZC3H12BQ5HYM0 836 aaKnown RBP8.3□□□□□ -1.08
DDB1-213ENST00000539332 SNAP47Q5SQN1 464 aa8.3□□□□□ -1.08
DDB1-213ENST00000539332 TMEM71Q6P5X7 295 aa8.3□□□□□ -1.08
DDB1-213ENST00000539332 CFAP161Q6P656 301 aa8.3□□□□□ -1.08
DDB1-213ENST00000539332 ZNF574Q6ZN55 896 aaPredicted RBP8.3□□□□□ -1.08
DDB1-213ENST00000539332 EIF3MQ7L2H7 374 aaKnown RBP8.3□□□□□ -1.08
DDB1-213ENST00000539332 TMPRSS9Q7Z410 1059 aa8.3□□□□□ -1.08
DDB1-213ENST00000539332 ADCK1Q86TW2 530 aa8.3□□□□□ -1.08
DDB1-213ENST00000539332 NAXDQ8IW45 347 aa8.3□□□□□ -1.08
DDB1-213ENST00000539332 SLC30A8Q8IWU4 369 aa8.3□□□□□ -1.08
DDB1-213ENST00000539332 SAMD14Q8IZD0 417 aaPredicted RBP8.3□□□□□ -1.08
DDB1-213ENST00000539332 MFSD4AQ8N468 514 aa8.3□□□□□ -1.08
DDB1-213ENST00000539332 OR6Q1Q8NGQ2 317 aa8.3□□□□□ -1.08
DDB1-213ENST00000539332 FBXO30Q8TB52 745 aa8.3□□□□□ -1.08
DDB1-213ENST00000539332 NCLNQ969V3 563 aa8.3□□□□□ -1.08
DDB1-213ENST00000539332 SLC47A1Q96FL8 570 aa8.3□□□□□ -1.08
DDB1-213ENST00000539332 RNF145Q96MT1 663 aa8.3□□□□□ -1.08
DDB1-213ENST00000539332 MUS81Q96NY9 551 aa8.3□□□□□ -1.08
DDB1-213ENST00000539332 OSBPL10Q9BXB5 764 aa8.3□□□□□ -1.08
DDB1-213ENST00000539332 LRRN3Q9H3W5 708 aa8.3□□□□□ -1.08
DDB1-213ENST00000539332 NTN4Q9HB63 628 aa8.3□□□□□ -1.08
DDB1-213ENST00000539332 SOHLH2Q9NX45 425 aa8.3□□□□□ -1.08
DDB1-213ENST00000539332 MS4A12Q9NXJ0 267 aa8.3□□□□□ -1.08
DDB1-213ENST00000539332 NTMQ9P121 344 aa8.3□□□□□ -1.08
DDB1-213ENST00000539332 FTSJ1Q9UET6 329 aa8.3□□□□□ -1.08
DDB1-213ENST00000539332 FBXW2Q9UKT8 454 aa8.3□□□□□ -1.08
DDB1-213ENST00000539332 ATXN7L1Q9ULK2 861 aaPredicted RBP8.3□□□□□ -1.08
DDB1-213ENST00000539332 SAMD4AQ9UPU9 718 aaKnown RBP8.3□□□□□ -1.08
DDB1-213ENST00000539332 FAM172BPA6NC97 362 aa8.29□□□□□ -1.08
DDB1-213ENST00000539332 ZNF99A8MXY4 864 aaPredicted RBP8.29□□□□□ -1.08
DDB1-213ENST00000539332 TOX3O15405 576 aaPredicted RBP8.29□□□□□ -1.08
DDB1-213ENST00000539332 ASNA1O43681 348 aa8.29□□□□□ -1.08
DDB1-213ENST00000539332 PRKD3O94806 890 aa8.29□□□□□ -1.08
DDB1-213ENST00000539332 SLC34A2O95436 690 aa8.29□□□□□ -1.08
DDB1-213ENST00000539332 PTTG1O95997 202 aa8.29□□□□□ -1.08
DDB1-213ENST00000539332 ALPLP05186 524 aa8.29□□□□□ -1.08
DDB1-213ENST00000539332 GP1BAP07359 652 aa8.29□□□□□ -1.08
DDB1-213ENST00000539332 FOSL1P15407 271 aa8.29□□□□□ -1.08
DDB1-213ENST00000539332 ACP1P24666 158 aa8.29□□□□□ -1.08
DDB1-213ENST00000539332 CHI3L1P36222 383 aaPredicted RBP8.29□□□□□ -1.08
DDB1-213ENST00000539332 POLR2IP36954 125 aaKnown RBP8.29□□□□□ -1.08
DDB1-213ENST00000539332 BUD31P41223 144 aaPredicted RBP8.29□□□□□ -1.08
DDB1-213ENST00000539332 PPP5CP53041 499 aa8.29□□□□□ -1.08
DDB1-213ENST00000539332 VSX2P58304 361 aaPredicted RBP8.29□□□□□ -1.08
DDB1-213ENST00000539332 HSD11B2P80365 405 aa8.29□□□□□ -1.08
DDB1-213ENST00000539332 MVKQ03426 396 aa8.29□□□□□ -1.08
DDB1-213ENST00000539332 HSPB3Q12988 150 aa8.29□□□□□ -1.08
DDB1-213ENST00000539332 SPCS2Q15005 226 aa8.29□□□□□ -1.08
DDB1-213ENST00000539332 DEFB110Q30KQ9 67 aa8.29□□□□□ -1.08
DDB1-213ENST00000539332 DEFB134Q4QY38 66 aa8.29□□□□□ -1.08
DDB1-213ENST00000539332 C6orf141Q5SZD1 244 aa8.29□□□□□ -1.08
DDB1-213ENST00000539332 FAM180BQ6P0A1 224 aa8.29□□□□□ -1.08
DDB1-213ENST00000539332 SLC16A12Q6ZSM3 486 aa8.29□□□□□ -1.08
DDB1-213ENST00000539332 PRSS42Q7Z5A4 293 aa8.29□□□□□ -1.08
DDB1-213ENST00000539332 RNF130Q86XS8 419 aa8.29□□□□□ -1.08
DDB1-213ENST00000539332 ZDHHC13Q8IUH4 622 aa8.29□□□□□ -1.08
DDB1-213ENST00000539332 MCATQ8IVS2 390 aaKnown RBP8.29□□□□□ -1.08
DDB1-213ENST00000539332 OR4D9Q8NGE8 314 aa8.29□□□□□ -1.08
DDB1-213ENST00000539332 OR5AK3PQ8NH89 298 aa8.29□□□□□ -1.08
DDB1-213ENST00000539332 ZCCHC10Q8TBK6 192 aa8.29□□□□□ -1.08
DDB1-213ENST00000539332 MOAP1Q96BY2 351 aa8.29□□□□□ -1.08
DDB1-213ENST00000539332 PYURFQ96I23 114 aa8.29□□□□□ -1.08
DDB1-213ENST00000539332 NODALQ96S42 347 aa8.29□□□□□ -1.08
DDB1-213ENST00000539332 CSF3RQ99062 836 aa8.29□□□□□ -1.08
DDB1-213ENST00000539332 SEPHS2Q99611 448 aa8.29□□□□□ -1.08
DDB1-213ENST00000539332 RBM4BQ9BQ04 359 aaKnown RBP8.29□□□□□ -1.08
DDB1-213ENST00000539332 RBM4Q9BWF3 364 aaKnown RBP8.29□□□□□ -1.08
DDB1-213ENST00000539332 ADNPQ9H2P0 1102 aa8.29□□□□□ -1.08
DDB1-213ENST00000539332 SERHL2Q9H4I8 314 aa8.29□□□□□ -1.08
DDB1-213ENST00000539332 SYNDIG1Q9H7V2 258 aa8.29□□□□□ -1.08
DDB1-213ENST00000539332 PDE7BQ9NP56 450 aa8.29□□□□□ -1.08
DDB1-213ENST00000539332 A4GALTQ9NPC4 353 aa8.29□□□□□ -1.08
DDB1-213ENST00000539332 PAK1IP1Q9NWT1 392 aaPredicted RBP8.29□□□□□ -1.08
DDB1-213ENST00000539332 NPAP1Q9NZP6 1156 aa8.29□□□□□ -1.08
DDB1-213ENST00000539332 RAPGEFL1Q9UHV5 662 aa8.29□□□□□ -1.08
DDB1-213ENST00000539332 RPS6KA6Q9UK32 745 aa8.29□□□□□ -1.08
DDB1-213ENST00000539332 ENTPD4Q9Y227 616 aa8.29□□□□□ -1.08
DDB1-213ENST00000539332 HCN4Q9Y3Q4 1203 aa8.29□□□□□ -1.08
DDB1-213ENST00000539332 ZNF451Q9Y4E5 1061 aa8.29□□□□□ -1.08
DDB1-213ENST00000539332 TESMINQ9Y4I5 508 aa8.29□□□□□ -1.08
DDB1-213ENST00000539332 A3GALT2U3KPV4 340 aa8.29□□□□□ -1.08
DDB1-213ENST00000539332 COL27A1Q8IZC6 1860 aaPredicted RBP8.29□□□□□ -1.08
DDB1-213ENST00000539332 FITM1A5D6W6 292 aa8.28□□□□□ -1.08
DDB1-213ENST00000539332 WASHC1A8K0Z3 465 aa8.28□□□□□ -1.08
DDB1-213ENST00000539332 A8MU76 341 aa8.28□□□□□ -1.08
DDB1-213ENST00000539332 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.28□□□□□ -1.08
DDB1-213ENST00000539332 H3BMH7 237 aa8.28□□□□□ -1.08
DDB1-213ENST00000539332 DLL1O00548 723 aa8.28□□□□□ -1.08
DDB1-213ENST00000539332 CYR61O00622 381 aa8.28□□□□□ -1.08
DDB1-213ENST00000539332 DYRK3O43781 588 aa8.28□□□□□ -1.08
DDB1-213ENST00000539332 GDF9O60383 454 aa8.28□□□□□ -1.08
DDB1-213ENST00000539332 DPM1O60762 260 aa8.28□□□□□ -1.08
DDB1-213ENST00000539332 CLIC3O95833 236 aa8.28□□□□□ -1.08
DDB1-213ENST00000539332 MSL3P1P0C860 447 aa8.28□□□□□ -1.08
DDB1-213ENST00000539332 CSNK2A2P19784 350 aaPredicted RBP8.28□□□□□ -1.08
DDB1-213ENST00000539332 CPN2P22792 545 aa8.28□□□□□ -1.08
DDB1-213ENST00000539332 SOAT1P35610 550 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms