RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 MYBPC3Q14896 1274 aa9.91□□□□□ -0.82
TNFRSF1A-211ENST00000538363 GPR68Q15743 365 aa9.91□□□□□ -0.82
TNFRSF1A-211ENST00000538363 NNATQ16517 81 aa9.91□□□□□ -0.82
TNFRSF1A-211ENST00000538363 DECR1Q16698 335 aa9.91□□□□□ -0.82
TNFRSF1A-211ENST00000538363 MTX3Q5HYI7 312 aa9.91□□□□□ -0.82
TNFRSF1A-211ENST00000538363 FAM69BQ5VUD6 431 aa9.91□□□□□ -0.82
TNFRSF1A-211ENST00000538363 TMEM205Q6UW68 189 aa9.91□□□□□ -0.82
TNFRSF1A-211ENST00000538363 NDUFAF7Q7L592 441 aa9.91□□□□□ -0.82
TNFRSF1A-211ENST00000538363 PATL1Q86TB9 770 aaKnown RBP9.91□□□□□ -0.82
TNFRSF1A-211ENST00000538363 CALHM3Q86XJ0 350 aa9.91□□□□□ -0.82
TNFRSF1A-211ENST00000538363 LGI4Q8N135 537 aa9.91□□□□□ -0.82
TNFRSF1A-211ENST00000538363 ZSCAN1Q8NBB4 408 aa9.91□□□□□ -0.82
TNFRSF1A-211ENST00000538363 SLC16A11Q8NCK7 471 aa9.91□□□□□ -0.82
TNFRSF1A-211ENST00000538363 C16orf52Q8NHV5 167 aa9.91□□□□□ -0.82
TNFRSF1A-211ENST00000538363 BBS10Q8TAM1 723 aa9.91□□□□□ -0.82
TNFRSF1A-211ENST00000538363 SPPL2AQ8TCT8 520 aa9.91□□□□□ -0.82
TNFRSF1A-211ENST00000538363 CTHRC1Q96CG8 243 aa9.91□□□□□ -0.82
TNFRSF1A-211ENST00000538363 RMND5BQ96G75 393 aaPredicted RBP9.91□□□□□ -0.82
TNFRSF1A-211ENST00000538363 SLC35A4Q96G79 324 aa9.91□□□□□ -0.82
TNFRSF1A-211ENST00000538363 NAF1Q96HR8 494 aaKnown RBP9.91□□□□□ -0.82
TNFRSF1A-211ENST00000538363 IP6K3Q96PC2 410 aa9.91□□□□□ -0.82
TNFRSF1A-211ENST00000538363 STACQ99469 402 aa9.91□□□□□ -0.82
TNFRSF1A-211ENST00000538363 G6PC3Q9BUM1 346 aa9.91□□□□□ -0.82
TNFRSF1A-211ENST00000538363 NUDT9Q9BW91 350 aa9.91□□□□□ -0.82
TNFRSF1A-211ENST00000538363 BTBD2Q9BX70 525 aa9.91□□□□□ -0.82
TNFRSF1A-211ENST00000538363 UGT2B28Q9BY64 529 aa9.91□□□□□ -0.82
TNFRSF1A-211ENST00000538363 TMEM38AQ9H6F2 299 aa9.91□□□□□ -0.82
TNFRSF1A-211ENST00000538363 ARMC7Q9H6L4 198 aa9.91□□□□□ -0.82
TNFRSF1A-211ENST00000538363 ZNF160Q9HCG1 818 aa9.91□□□□□ -0.82
TNFRSF1A-211ENST00000538363 A4GALTQ9NPC4 353 aa9.91□□□□□ -0.82
TNFRSF1A-211ENST00000538363 GPATCH2Q9NW75 528 aa9.91□□□□□ -0.82
TNFRSF1A-211ENST00000538363 GIN1Q9NXP7 522 aa9.91□□□□□ -0.82
TNFRSF1A-211ENST00000538363 GMPR2Q9P2T1 348 aaKnown RBP9.91□□□□□ -0.82
TNFRSF1A-211ENST00000538363 ANGPTL2Q9UKU9 493 aa9.91□□□□□ -0.82
TNFRSF1A-211ENST00000538363 USP22Q9UPT9 525 aa9.91□□□□□ -0.82
TNFRSF1A-211ENST00000538363 SAMD4AQ9UPU9 718 aaKnown RBP9.91□□□□□ -0.82
TNFRSF1A-211ENST00000538363 A0A0G2JPF8 293 aa9.9□□□□□ -0.82
TNFRSF1A-211ENST00000538363 CDC14CA4D256 554 aa9.9□□□□□ -0.82
TNFRSF1A-211ENST00000538363 A8MUI8 341 aa9.9□□□□□ -0.82
TNFRSF1A-211ENST00000538363 A8MVJ9 347 aa9.9□□□□□ -0.82
TNFRSF1A-211ENST00000538363 CDRT15L2A8MXV6 281 aa9.9□□□□□ -0.82
TNFRSF1A-211ENST00000538363 HNRNPCL2B2RXH8 293 aa9.9□□□□□ -0.82
TNFRSF1A-211ENST00000538363 HNRNPCL3B7ZW38 293 aa9.9□□□□□ -0.82
TNFRSF1A-211ENST00000538363 HMGN4O00479 90 aa9.9□□□□□ -0.82
TNFRSF1A-211ENST00000538363 SUV39H1O43463 412 aa9.9□□□□□ -0.82
TNFRSF1A-211ENST00000538363 TNFRSF21O75509 655 aa9.9□□□□□ -0.82
TNFRSF1A-211ENST00000538363 STX11O75558 287 aa9.9□□□□□ -0.82
TNFRSF1A-211ENST00000538363 KLF7O75840 302 aaPredicted RBP9.9□□□□□ -0.82
TNFRSF1A-211ENST00000538363 DDAH2O95865 285 aa9.9□□□□□ -0.82
TNFRSF1A-211ENST00000538363 SERPINA1P01009 418 aa9.9□□□□□ -0.82
TNFRSF1A-211ENST00000538363 ALPPP05187 535 aa9.9□□□□□ -0.82
TNFRSF1A-211ENST00000538363 HNRNPCL4P0DMR1 293 aa9.9□□□□□ -0.82
TNFRSF1A-211ENST00000538363 ARAFP10398 606 aa9.9□□□□□ -0.82
TNFRSF1A-211ENST00000538363 ACP2P11117 423 aa9.9□□□□□ -0.82
TNFRSF1A-211ENST00000538363 HOXB9P17482 250 aaPredicted RBP9.9□□□□□ -0.82
TNFRSF1A-211ENST00000538363 KDELR2P33947 212 aa9.9□□□□□ -0.82
TNFRSF1A-211ENST00000538363 PPICP45877 212 aa9.9□□□□□ -0.82
TNFRSF1A-211ENST00000538363 EMDP50402 254 aa9.9□□□□□ -0.82
TNFRSF1A-211ENST00000538363 NR0B1P51843 470 aaKnown RBP9.9□□□□□ -0.82
TNFRSF1A-211ENST00000538363 SLC26A5P58743 744 aa9.9□□□□□ -0.82
TNFRSF1A-211ENST00000538363 ELF3P78545 371 aaPredicted RBP9.9□□□□□ -0.82
TNFRSF1A-211ENST00000538363 MS4A2Q01362 244 aa9.9□□□□□ -0.82
TNFRSF1A-211ENST00000538363 CHRNB3Q05901 458 aa9.9□□□□□ -0.82
TNFRSF1A-211ENST00000538363 VEZF1Q14119 521 aa9.9□□□□□ -0.82
TNFRSF1A-211ENST00000538363 RTP5Q14D33 572 aa9.9□□□□□ -0.82
TNFRSF1A-211ENST00000538363 SYPL1Q16563 259 aa9.9□□□□□ -0.82
TNFRSF1A-211ENST00000538363 DUSP5Q16690 384 aa9.9□□□□□ -0.82
TNFRSF1A-211ENST00000538363 FAM98BQ52LJ0 330 aaKnown RBP9.9□□□□□ -0.82
TNFRSF1A-211ENST00000538363 DCST2Q5T1A1 773 aa9.9□□□□□ -0.82
TNFRSF1A-211ENST00000538363 FHL5Q5TD97 284 aa9.9□□□□□ -0.82
TNFRSF1A-211ENST00000538363 FIGNL1Q6PIW4 674 aa9.9□□□□□ -0.82
TNFRSF1A-211ENST00000538363 ZNF517Q6ZMY9 492 aaPredicted RBP9.9□□□□□ -0.82
TNFRSF1A-211ENST00000538363 PEX5LQ8IYB4 626 aa9.9□□□□□ -0.82
TNFRSF1A-211ENST00000538363 TAGAPQ8N103 731 aa9.9□□□□□ -0.82
TNFRSF1A-211ENST00000538363 ZNF614Q8N883 585 aa9.9□□□□□ -0.82
TNFRSF1A-211ENST00000538363 ANKFN1Q8N957 763 aa9.9□□□□□ -0.82
TNFRSF1A-211ENST00000538363 MIPOL1Q8TD10 442 aa9.9□□□□□ -0.82
TNFRSF1A-211ENST00000538363 ZNF721Q8TF20 911 aa9.9□□□□□ -0.82
TNFRSF1A-211ENST00000538363 THAP3Q8WTV1 239 aaPredicted RBP9.9□□□□□ -0.82
TNFRSF1A-211ENST00000538363 RASSF5Q8WWW0 418 aa9.9□□□□□ -0.82
TNFRSF1A-211ENST00000538363 PIK3R3Q92569 461 aa9.9□□□□□ -0.82
TNFRSF1A-211ENST00000538363 PROX1Q92786 737 aa9.9□□□□□ -0.82
TNFRSF1A-211ENST00000538363 UTP4Q969X6 686 aaKnown RBP9.9□□□□□ -0.82
TNFRSF1A-211ENST00000538363 TMEM19Q96HH6 336 aa9.9□□□□□ -0.82
TNFRSF1A-211ENST00000538363 LCORQ96JN0 433 aaPredicted RBP9.9□□□□□ -0.82
TNFRSF1A-211ENST00000538363 COL21A1Q96P44 957 aa9.9□□□□□ -0.82
TNFRSF1A-211ENST00000538363 SEPHS2Q99611 448 aa9.9□□□□□ -0.82
TNFRSF1A-211ENST00000538363 SCNM1Q9BWG6 230 aa9.9□□□□□ -0.82
TNFRSF1A-211ENST00000538363 ITPAQ9BY32 194 aa9.9□□□□□ -0.82
TNFRSF1A-211ENST00000538363 SPRY4Q9C004 299 aa9.9□□□□□ -0.82
TNFRSF1A-211ENST00000538363 ZNF700Q9H0M5 742 aa9.9□□□□□ -0.82
TNFRSF1A-211ENST00000538363 DENND2DQ9H6A0 471 aaPredicted RBP9.9□□□□□ -0.82
TNFRSF1A-211ENST00000538363 YY1AP1Q9H869 796 aa9.9□□□□□ -0.82
TNFRSF1A-211ENST00000538363 DUSP22Q9NRW4 184 aa9.9□□□□□ -0.82
TNFRSF1A-211ENST00000538363 NTMQ9P121 344 aa9.9□□□□□ -0.82
TNFRSF1A-211ENST00000538363 SEC14L3Q9UDX4 400 aa9.9□□□□□ -0.82
TNFRSF1A-211ENST00000538363 ZNF639Q9UID6 485 aa9.9□□□□□ -0.82
TNFRSF1A-211ENST00000538363 KLK13Q9UKR3 277 aa9.9□□□□□ -0.82
TNFRSF1A-211ENST00000538363 CBLCQ9ULV8 474 aa9.9□□□□□ -0.82
TNFRSF1A-211ENST00000538363 WDR45Q9Y484 360 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms