RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 MGLLQ99685 303 aa13.13□□□□□ -0.31
LIMK1-208ENST00000538333 GDF15Q99988 308 aa13.13□□□□□ -0.31
LIMK1-208ENST00000538333 ZFYVE21Q9BQ24 234 aa13.13□□□□□ -0.31
LIMK1-208ENST00000538333 TAPBPLQ9BX59 468 aa13.13□□□□□ -0.31
LIMK1-208ENST00000538333 POLDIP3Q9BY77 421 aaKnown RBP13.13□□□□□ -0.31
LIMK1-208ENST00000538333 KLHL25Q9H0H3 589 aa13.13□□□□□ -0.31
LIMK1-208ENST00000538333 TCEAL2Q9H3H9 227 aaPredicted RBP13.13□□□□□ -0.31
LIMK1-208ENST00000538333 USP36Q9P275 1121 aaKnown RBP13.13□□□□□ -0.31
LIMK1-208ENST00000538333 URADA6NGE7 173 aa13.12□□□□□ -0.31
LIMK1-208ENST00000538333 METTL15A6NJ78 407 aa13.12□□□□□ -0.31
LIMK1-208ENST00000538333 DUXAA6NLW8 204 aa13.12□□□□□ -0.31
LIMK1-208ENST00000538333 B3GALT2O43825 422 aa13.12□□□□□ -0.31
LIMK1-208ENST00000538333 PRKYO43930 277 aa13.12□□□□□ -0.31
LIMK1-208ENST00000538333 GIPRP48546 466 aa13.12□□□□□ -0.31
LIMK1-208ENST00000538333 UBE2IP63279 158 aaKnown RBP13.12□□□□□ -0.31
LIMK1-208ENST00000538333 SIM1P81133 766 aaPredicted RBP13.12□□□□□ -0.31
LIMK1-208ENST00000538333 ZNF91Q05481 1191 aa13.12□□□□□ -0.31
LIMK1-208ENST00000538333 RGS21Q2M5E4 152 aa13.12□□□□□ -0.31
LIMK1-208ENST00000538333 SOWAHCQ53LP3 525 aaPredicted RBP13.12□□□□□ -0.31
LIMK1-208ENST00000538333 ACSM5Q6NUN0 579 aa13.12□□□□□ -0.31
LIMK1-208ENST00000538333 USP53Q70EK8 1073 aa13.12□□□□□ -0.31
LIMK1-208ENST00000538333 BCDIN3DQ7Z5W3 292 aaKnown RBP13.12□□□□□ -0.31
LIMK1-208ENST00000538333 KIF18BQ86Y91 864 aa13.12□□□□□ -0.31
LIMK1-208ENST00000538333 SFTPA2Q8IWL1 248 aa13.12□□□□□ -0.31
LIMK1-208ENST00000538333 TRIM48Q8IWZ4 208 aa13.12□□□□□ -0.31
LIMK1-208ENST00000538333 FAM26EQ8N5C1 309 aa13.12□□□□□ -0.31
LIMK1-208ENST00000538333 WDR36Q8NI36 951 aaKnown RBP13.12□□□□□ -0.31
LIMK1-208ENST00000538333 ADAMTS15Q8TE58 950 aa13.12□□□□□ -0.31
LIMK1-208ENST00000538333 FAM3CQ92520 227 aa13.12□□□□□ -0.31
LIMK1-208ENST00000538333 NR4A3Q92570 626 aa13.12□□□□□ -0.31
LIMK1-208ENST00000538333 POT1Q9NUX5 634 aa13.12□□□□□ -0.31
LIMK1-208ENST00000538333 CPNE7Q9UBL6 633 aa13.12□□□□□ -0.31
LIMK1-208ENST00000538333 MRPS2Q9Y399 296 aaKnown RBP13.12□□□□□ -0.31
LIMK1-208ENST00000538333 H0YGG7 62 aa13.11□□□□□ -0.31
LIMK1-208ENST00000538333 DSCR3O14972 297 aa13.11□□□□□ -0.31
LIMK1-208ENST00000538333 CYP7B1O75881 506 aa13.11□□□□□ -0.31
LIMK1-208ENST00000538333 HSMCR30P0CW71 290 aa13.11□□□□□ -0.31
LIMK1-208ENST00000538333 DBTP11182 482 aaKnown RBP13.11□□□□□ -0.31
LIMK1-208ENST00000538333 PVRP15151 417 aa13.11□□□□□ -0.31
LIMK1-208ENST00000538333 TRHRP34981 398 aaPredicted RBP13.11□□□□□ -0.31
LIMK1-208ENST00000538333 RABIFP47224 123 aa13.11□□□□□ -0.31
LIMK1-208ENST00000538333 PCYT1AP49585 367 aa13.11□□□□□ -0.31
LIMK1-208ENST00000538333 TAS2R41P59536 307 aa13.11□□□□□ -0.31
LIMK1-208ENST00000538333 ARF3P61204 181 aaPredicted RBP13.11□□□□□ -0.31
LIMK1-208ENST00000538333 IFITM3Q01628 133 aa13.11□□□□□ -0.31
LIMK1-208ENST00000538333 RHAGQ02094 409 aa13.11□□□□□ -0.31
LIMK1-208ENST00000538333 NCF4Q15080 339 aa13.11□□□□□ -0.31
LIMK1-208ENST00000538333 MED22Q15528 200 aa13.11□□□□□ -0.31
LIMK1-208ENST00000538333 INAQ16352 499 aa13.11□□□□□ -0.31
LIMK1-208ENST00000538333 OR4N5Q8IXE1 308 aa13.11□□□□□ -0.31
LIMK1-208ENST00000538333 SHISA5Q8N114 240 aa13.11□□□□□ -0.31
LIMK1-208ENST00000538333 CLIP4Q8N3C7 705 aa13.11□□□□□ -0.31
LIMK1-208ENST00000538333 SLC44A3Q8N4M1 653 aa13.11□□□□□ -0.31
LIMK1-208ENST00000538333 MCFD2Q8NI22 146 aa13.11□□□□□ -0.31
LIMK1-208ENST00000538333 BAHD1Q8TBE0 780 aaPredicted RBP13.11□□□□□ -0.31
LIMK1-208ENST00000538333 HMGB4Q8WW32 186 aa13.11□□□□□ -0.31
LIMK1-208ENST00000538333 RSC1A1Q92681 617 aa13.11□□□□□ -0.31
LIMK1-208ENST00000538333 CDS1Q92903 461 aa13.11□□□□□ -0.31
LIMK1-208ENST00000538333 COL26A1Q96A83 441 aa13.11□□□□□ -0.31
LIMK1-208ENST00000538333 CENPOQ9BU64 300 aa13.11□□□□□ -0.31
LIMK1-208ENST00000538333 PLA2G12AQ9BZM1 189 aa13.11□□□□□ -0.31
LIMK1-208ENST00000538333 NXF2Q9GZY0 626 aaKnown RBP13.11□□□□□ -0.31
LIMK1-208ENST00000538333 DSN1Q9H410 356 aa13.11□□□□□ -0.31
LIMK1-208ENST00000538333 RNF167Q9H6Y7 350 aa13.11□□□□□ -0.31
LIMK1-208ENST00000538333 SEMA4GQ9NTN9 838 aa13.11□□□□□ -0.31
LIMK1-208ENST00000538333 TVP23BQ9NYZ1 205 aa13.11□□□□□ -0.31
LIMK1-208ENST00000538333 RPL36Q9Y3U8 105 aaKnown RBP13.11□□□□□ -0.31
LIMK1-208ENST00000538333 ENTPD2Q9Y5L3 495 aa13.11□□□□□ -0.31
LIMK1-208ENST00000538333 FAM221BA6H8Z2 402 aa13.11□□□□□ -0.31
LIMK1-208ENST00000538333 ARHGAP33O14559 1287 aa13.11□□□□□ -0.31
LIMK1-208ENST00000538333 CBFA2T3O75081 653 aa13.11□□□□□ -0.31
LIMK1-208ENST00000538333 CPMP14384 443 aa13.11□□□□□ -0.31
LIMK1-208ENST00000538333 ALOX12P18054 663 aa13.11□□□□□ -0.31
LIMK1-208ENST00000538333 GSTM3P21266 225 aa13.11□□□□□ -0.31
LIMK1-208ENST00000538333 CSTF2P33240 577 aaKnown RBP eCLIP13.11□□□□□ -0.31
LIMK1-208ENST00000538333 ATP1A4Q13733 1029 aa13.11□□□□□ -0.31
LIMK1-208ENST00000538333 GINS1Q14691 196 aa13.11□□□□□ -0.31
LIMK1-208ENST00000538333 SSX1Q16384 188 aa13.11□□□□□ -0.31
LIMK1-208ENST00000538333 TSTQ16762 297 aaKnown RBP13.11□□□□□ -0.31
LIMK1-208ENST00000538333 ZNF404Q494X3 552 aa13.11□□□□□ -0.31
LIMK1-208ENST00000538333 ZNF628Q5EBL2 1059 aa13.11□□□□□ -0.31
LIMK1-208ENST00000538333 EXOSC6Q5RKV6 272 aaKnown RBP13.11□□□□□ -0.31
LIMK1-208ENST00000538333 FHL5Q5TD97 284 aa13.11□□□□□ -0.31
LIMK1-208ENST00000538333 RNLSQ5VYX0 342 aa13.11□□□□□ -0.31
LIMK1-208ENST00000538333 RNF44Q7L0R7 432 aa13.11□□□□□ -0.31
LIMK1-208ENST00000538333 ABHD13Q7L211 337 aa13.11□□□□□ -0.31
LIMK1-208ENST00000538333 PRSS41Q7RTY9 318 aa13.11□□□□□ -0.31
LIMK1-208ENST00000538333 MRGPREQ86SM8 312 aa13.11□□□□□ -0.31
LIMK1-208ENST00000538333 OR52P1PQ8NH57 321 aa13.11□□□□□ -0.31
LIMK1-208ENST00000538333 PPP1R14BQ96C90 147 aa13.11□□□□□ -0.31
LIMK1-208ENST00000538333 TMEM80Q96HE8 168 aa13.11□□□□□ -0.31
LIMK1-208ENST00000538333 OPALINQ96PE5 141 aa13.11□□□□□ -0.31
LIMK1-208ENST00000538333 TSSK6Q9BXA6 273 aa13.11□□□□□ -0.31
LIMK1-208ENST00000538333 MMP27Q9H306 513 aa13.11□□□□□ -0.31
LIMK1-208ENST00000538333 ANKRD19PQ9H560 264 aa13.11□□□□□ -0.31
LIMK1-208ENST00000538333 LYRM4Q9HD34 91 aa13.11□□□□□ -0.31
LIMK1-208ENST00000538333 RHBDL2Q9NX52 303 aa13.11□□□□□ -0.31
LIMK1-208ENST00000538333 PTGFRNQ9P2B2 879 aa13.11□□□□□ -0.31
LIMK1-208ENST00000538333 CLEC2DQ9UHP7 191 aa13.11□□□□□ -0.31
LIMK1-208ENST00000538333 A3GALT2U3KPV4 340 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms